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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916880
Clone id YMU001_000093_B06
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGTTATTAACAATACACCAAACAAGTAGCAATGGAGAAGAATCACATCATTCCAGAGGTC
TTCACGAATGGCTGAGAGAGTGTAGTGAGAACAAAGGTGAAGCTACAACAGTAAACTGTA
ATTCAGTTCGTTCATTAATAGACTATTACAAAGAATACAGTCAAGAATCAAATGCAAAAA
ACAGTAACAACGATATACCCTGTGCTTTTTGCAGAACCTACAGGATGGACGGACATGGGG
AGAGAGAGGGAGAGAGAGAGAAAGGGAGAGAGAGAGCAGGAACTAACCTGCAAGAGATTT
TCCGCTAAGGCTCACCACTGCTAAACAAAGAGGCACACAACACGTAAAACTACTTCCTCC
AAGCATTCTAAAGAGATACACAAATAGGCAGCACGCCAAAAGCACGTGGAAAAGGCTGCG
CACCCACCAGTTTGAGAAAGCGAGAAAACCAGAGCTTTCTAAACAGAGCCTCATCCACGC
ACTGCATAGCACACGTACACCATAACTTATCTCGA
■■Homology search results ■■ -
sp_hit_id Q989F1
Definition sp|Q989F1|Y6452_RHILO Maf-like protein mll6452 OS=Rhizobium loti
Align length 47
Score (bit) 30.4
E-value 5.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916880|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B06.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q989F1|Y6452_RHILO Maf-like protein mll6452 OS=Rhizobium loti...    30   5.1  
sp|Q3HXX9|NGFV2_HOPST Venom nerve growth factor 2 OS=Hoplocephal...    30   5.1  

>sp|Q989F1|Y6452_RHILO Maf-like protein mll6452 OS=Rhizobium loti
           GN=mll6452 PE=3 SV=1
          Length = 208

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 302 PLRLTTAKQRGTQHVKLLPPSILKRYTNRQHAKSTWKRLRTHQFEKA 442
           P R+   +Q G +  ++LP  I +     +H +S  KRL T + EKA
Sbjct: 14  PRRIELLQQAGIEPDRILPADIDETPLRAEHPRSLAKRLSTEKAEKA 60


>sp|Q3HXX9|NGFV2_HOPST Venom nerve growth factor 2 OS=Hoplocephalus
           stephensii PE=2 SV=1
          Length = 245

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
 Frame = +3

Query: 39  ESH--HSRGLHEWLRECS---ENKGEATTVNCNSVRSLIDY------YKEYSQESNAKNS 185
           E+H  H+RG H      S    NK +AT +  N V  ++D       YK+Y  E+  +N 
Sbjct: 126 ENHPVHNRGEHSVCDSISVWVTNKTKATDIKGNMVTVMVDVNLNNEVYKQYFFETKCRNP 185

Query: 186 NNDIPCAFCR 215
           N ++  + CR
Sbjct: 186 NPNLLQSECR 195
tr_hit_id B3L0E2
Definition tr|B3L0E2|B3L0E2_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H)
Align length 45
Score (bit) 35.4
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916880|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B06.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3L0E2|B3L0E2_PLAKH Putative uncharacterized protein OS=Plasm...    35   1.7  
tr|Q59YV0|Q59YV0_CANAL Potential mitochondrial ATP-dependent pro...    35   2.2  
tr|A0CH96|A0CH96_PARTE Chromosome undetermined scaffold_18, whol...    34   3.7  
tr|B3LBP4|B3LBP4_PLAKH Carbamoyl phosphate synthetase, putative ...    34   4.9  
tr|Q8JKQ9|Q8JKQ9_9VIRU Orf52 OS=Heliothis zea virus 1 GN=orf52 P...    33   6.4  
tr|A7P545|A7P545_VITVI Chromosome chr4 scaffold_6, whole genome ...    33   6.4  
tr|A5C1N3|A5C1N3_VITVI Putative uncharacterized protein OS=Vitis...    33   6.4  

>tr|B3L0E2|B3L0E2_PLAKH Putative uncharacterized protein
           OS=Plasmodium knowlesi (strain H) GN=PKH_031900 PE=4
           SV=1
          Length = 832

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +3

Query: 81  CSENKGEATTVNCNSVRSLIDYYKEYSQESNAKNSNNDIPCAFCR 215
           C E+K E  +    + +SL D+YKEY Q+SN  +  ND+P  + +
Sbjct: 552 CEEDKKEDPSFLLKNKQSLYDFYKEY-QKSNKTHMRNDLPVMWAK 595


>tr|Q59YV0|Q59YV0_CANAL Potential mitochondrial ATP-dependent
           protease OS=Candida albicans GN=LON1 PE=3 SV=1
          Length = 1258

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
 Frame = +3

Query: 18  QTSSNGEESHHSRGLH--------EWLRECSENKGEATTVNCNSV-------RSLIDYYK 152
           Q   +G+ +HH RGL         +W    S+ KG+ TT+  N         + LIDY +
Sbjct: 204 QIKDDGKNNHHKRGLKTNEQVIGIDWNHNVSDLKGKFTTLQKNYQQLFQSIDKFLIDYRE 263

Query: 153 EYSQESNAKNSNND 194
                 N  N+NN+
Sbjct: 264 ALDYNKNNSNNNNN 277


>tr|A0CH96|A0CH96_PARTE Chromosome undetermined scaffold_18, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00007603001 PE=4 SV=1
          Length = 759

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 359 PSILKRYTNRQHAKSTWKRLRTHQFEKARKPELSKQSLIHALHSTRT 499
           P+I+ R ++  H KS  K+    QF+ +R  ++++QS   ALH+T T
Sbjct: 678 PTIMHRQSDDSHYKSDIKKAANTQFKFSRTKQVTRQSNRPALHNTST 724


>tr|B3LBP4|B3LBP4_PLAKH Carbamoyl phosphate synthetase, putative
            OS=Plasmodium knowlesi (strain H) GN=PKH_140710 PE=4 SV=1
          Length = 2169

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
 Frame = +3

Query: 27   SNGEESHHSRGLH-EWLRECSENKGEATTVNCNSVR---------SLIDYYKEYSQESNA 176
            + GE   H  G+  E  +  S NK   T +N N +          S + Y + Y++ SNA
Sbjct: 1494 TKGENKLHHEGIEREKSKGKSSNKKRETKLNSNGINIDDKNSDCFSELSYLRNYTKSSNA 1553

Query: 177  KNSNNDIPCAF 209
            +N N D   AF
Sbjct: 1554 ENDNTDDDDAF 1564


>tr|Q8JKQ9|Q8JKQ9_9VIRU Orf52 OS=Heliothis zea virus 1 GN=orf52 PE=4
            SV=1
          Length = 1324

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +3

Query: 15   HQTSSNGEESHHSRGLHEWLRECSENKGEATTVNCNSVRSLIDYYKEYSQESNAKNSNN 191
            H  +SN  +S+H+   + + + C+ N+   TT    +       YK+Y++ SN+  +NN
Sbjct: 1108 HSYNSNNNKSNHNNNNNLYTKPCTLNQTYPTTFKVKN-------YKKYNKSSNSNTNNN 1159


>tr|A7P545|A7P545_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032395001
           PE=4 SV=1
          Length = 735

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
 Frame = -3

Query: 495 RVLCSAWMRLCLESSGFLAFSNWWVRSLFHVLL----------ACCLFVYLFRMLGGSSF 346
           R+LC+  +R C+     ++ S+W V  + H LL          AC LF  L   L G++ 
Sbjct: 361 RILCA--IRTCIAHCHLVSRSDWMVEEIMHALLMEVDLLPKEKACVLFSLLLHNLSGAAL 418

Query: 345 TCC 337
             C
Sbjct: 419 KIC 421


>tr|A5C1N3|A5C1N3_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_030975 PE=4 SV=1
          Length = 1100

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
 Frame = -3

Query: 495  RVLCSAWMRLCLESSGFLAFSNWWVRSLFHVLL----------ACCLFVYLFRMLGGSSF 346
            R+LC+  +R C+     ++ S+W V  + H LL          AC LF  L   L G++ 
Sbjct: 971  RILCA--IRTCIAHCHLVSRSDWMVEEIMHALLMEVDLLPKEKACVLFSLLLHNLSGAAL 1028

Query: 345  TCC 337
              C
Sbjct: 1029 KIC 1031