BP916885
Clone id YMU001_000093_B12
Library
Length 380
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTCCTGTTGGTCTTCTCTGGGTGGGCAGGCCAAAGAGATTCTTGCATGCTTCCTGGCAGG
ATGCCTACCTCCCACATCAGGTTCCTTCTCCAACTCCTTTGAGGTTGACCCATCAACAAG
TTTCGACTTCCCATACTTGTTAAGTATAGAAACATTAGCTTCCTCCTGTGGCTTCACTGT
ATCATCAGCATCCTTCCTGCGCTCAAAGACACCCATTGGTCCATCTGCAACTGACCCTCT
AGCCTTCTGAATCCTTCGGCTAGGCCTTCAACTGCGGACACCTCAAGGGGTCTGGTGGCA
ACTCTTCAGATTCAAGTACCCCTTCTCTTGTGCCTAGCAGATCACCCATCGAAAACCCAT
CAGGTACATAGACACCCTCC
■■Homology search results ■■ -
sp_hit_id A2RJY0
Definition sp|A2RJY0|PUR9_LACLM Bifunctional purine biosynthesis protein purH OS=Lactococcus lactis subsp. cremoris (strain MG1363)
Align length 77
Score (bit) 35.4
E-value 0.088
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916885|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B12.
(380 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A2RJY0|PUR9_LACLM Bifunctional purine biosynthesis protein pu... 35 0.088
sp|Q02Y66|PUR9_LACLS Bifunctional purine biosynthesis protein pu... 35 0.15
sp|Q9CFG0|PUR9_LACLA Bifunctional purine biosynthesis protein pu... 34 0.20
sp|O34632|SIRB_BACSU Sirohydrochlorin ferrochelatase OS=Bacillus... 32 0.74
sp|Q0VCK0|PUR9_BOVIN Bifunctional purine biosynthesis protein PU... 32 0.97
sp|O58965|PGK_PYRHO Phosphoglycerate kinase OS=Pyrococcus horiko... 32 0.97
sp|Q9UZW0|PGK_PYRAB Phosphoglycerate kinase OS=Pyrococcus abyssi... 32 1.3
sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=C... 31 1.7
sp|P61884|PGK_PYRWO Phosphoglycerate kinase OS=Pyrococcus woesei... 30 2.8
sp|P61883|PGK_PYRFU Phosphoglycerate kinase OS=Pyrococcus furios... 30 2.8
sp|P23792|DISC_DROME Protein disconnected OS=Drosophila melanoga... 30 2.8
sp|Q47LI5|RPOB_THEFY DNA-directed RNA polymerase subunit beta OS... 30 3.7
sp|Q5R5C2|PUR9_PONAB Bifunctional purine biosynthesis protein PU... 29 6.3
sp|P31939|PUR9_HUMAN Bifunctional purine biosynthesis protein PU... 29 6.3
sp|Q58058|PGK_METJA Phosphoglycerate kinase OS=Methanocaldococcu... 29 6.3
sp|O45291|TBX33_CAEEL Putative T-box protein 33 OS=Caenorhabditi... 29 8.2
sp|Q5FTX7|RPOB_GLUOX DNA-directed RNA polymerase subunit beta OS... 29 8.2
sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protei... 29 8.2

>sp|A2RJY0|PUR9_LACLM Bifunctional purine biosynthesis protein purH
OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=purH PE=3 SV=1
Length = 518

Score = 35.4 bits (80), Expect = 0.088
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = -3

Query: 213 GVFERRKDADDTVKPQEEANVS-----ILNKYG-KSKLVDGSTSKELEKEPDVGG----R 64
G R+D D +K E ++S ++N Y K L+ G + E+ ++ D+GG R
Sbjct: 72 GALLGRRDLDSHMKSMAEHHISPIDLVVVNLYPFKETLLAGGSQAEMIEKIDIGGPSMLR 131

Query: 63 HPARKHARISLACPPRE 13
A+ HA +++ C P +
Sbjct: 132 SAAKNHAAVTVVCDPMD 148


>sp|Q02Y66|PUR9_LACLS Bifunctional purine biosynthesis protein purH
OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=purH PE=3 SV=1
Length = 518

Score = 34.7 bits (78), Expect = 0.15
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = -3

Query: 213 GVFERRKDADDTVKPQEEANVS-----ILNKYG-KSKLVDGSTSKELEKEPDVGG----R 64
G R+D D +K E ++S ++N Y K L+ G + E+ ++ D+GG R
Sbjct: 72 GALLGRRDLDSHMKSLAEHHISPIDLVVVNLYPFKETLLAGGSQAEMIEKIDIGGPSMLR 131

Query: 63 HPARKHARISLACPPRE 13
A+ HA +++ C P +
Sbjct: 132 SAAKNHAAVTVVCDPMD 148


>sp|Q9CFG0|PUR9_LACLA Bifunctional purine biosynthesis protein purH
OS=Lactococcus lactis subsp. lactis GN=purH PE=3 SV=1
Length = 518

Score = 34.3 bits (77), Expect = 0.20
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = -3

Query: 213 GVFERRKDADDTVKPQEEANVS-----ILNKYG-KSKLVDGSTSKELEKEPDVGG----R 64
G R+D + +K E ++S ++N Y K L+ G + E+ ++ D+GG R
Sbjct: 72 GALLGRRDLESHMKSMTEHHISPIDLVVVNLYPFKETLLAGGSQAEMIEKIDIGGPSMLR 131

Query: 63 HPARKHARISLACPPRE 13
A+ HA +++ C P +
Sbjct: 132 SAAKNHASVTVVCDPND 148


>sp|O34632|SIRB_BACSU Sirohydrochlorin ferrochelatase OS=Bacillus
subtilis GN=sirB PE=3 SV=1
Length = 261

Score = 32.3 bits (72), Expect = 0.74
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2

Query: 32 KEILACFLAGCLPPTSGSFSNSFEVDPSTSFDFPYLL 142
KE++ CFL C P FS + D T+F PYLL
Sbjct: 159 KEVIPCFLTACGPNYKEVFSELEKDDGITTFIVPYLL 195


>sp|Q0VCK0|PUR9_BOVIN Bifunctional purine biosynthesis protein PURH
OS=Bos taurus GN=ATIC PE=2 SV=1
Length = 592

Score = 32.0 bits (71), Expect = 0.97
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -3

Query: 144 LNKYGKSKLVDGSTSKELEKEPDVGG----RHPARKHARISLACPPRE 13
L +GK+ G T +E + D+GG R A+ HAR+++ C P +
Sbjct: 103 LYPFGKTVASPGVTVEEAVEHIDIGGVTLLRAAAKNHARVTVVCEPED 150


>sp|O58965|PGK_PYRHO Phosphoglycerate kinase OS=Pyrococcus
horikoshii GN=pgk PE=1 SV=1
Length = 410

Score = 32.0 bits (71), Expect = 0.97
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3

Query: 252 IQKARGSVADGPMGVFERRKDADDTVK 172
+ KAR VA+GPMGVFER + A TV+
Sbjct: 316 LMKARIIVANGPMGVFEREEFAIGTVE 342


>sp|Q9UZW0|PGK_PYRAB Phosphoglycerate kinase OS=Pyrococcus abyssi
GN=pgk PE=3 SV=1
Length = 410

Score = 31.6 bits (70), Expect = 1.3
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3

Query: 252 IQKARGSVADGPMGVFERRKDADDTVK 172
I KA+ VA+GPMGVFER + A TV+
Sbjct: 316 IMKAKVVVANGPMGVFEREEFALGTVE 342


>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm
OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1
Length = 4568

Score = 31.2 bits (69), Expect = 1.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2

Query: 26 QAKEILACFLAGCLPPTSGSFS 91
Q KEI+ C +A C+ PT+GSF+
Sbjct: 2632 QLKEIINCQMAACMNPTAGSFN 2653


>sp|P61884|PGK_PYRWO Phosphoglycerate kinase OS=Pyrococcus woesei
GN=pgk PE=1 SV=1
Length = 410

Score = 30.4 bits (67), Expect = 2.8
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3

Query: 246 KARGSVADGPMGVFERRKDADDTV 175
KAR VA+GPMGVFER + A T+
Sbjct: 318 KARIIVANGPMGVFEREEFAVGTI 341


>sp|P61883|PGK_PYRFU Phosphoglycerate kinase OS=Pyrococcus furiosus
GN=pgk PE=3 SV=1
Length = 410

Score = 30.4 bits (67), Expect = 2.8
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3

Query: 246 KARGSVADGPMGVFERRKDADDTV 175
KAR VA+GPMGVFER + A T+
Sbjct: 318 KARIIVANGPMGVFEREEFAVGTI 341


tr_hit_id Q9S7Q4
Definition tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance protein Gpa2) OS=Solanum tuberosum
Align length 50
Score (bit) 37.7
E-value 0.28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916885|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B12.
(380 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance prote... 38 0.28
tr|A7R7F0|A7R7F0_VITVI Chromosome undetermined scaffold_1732, wh... 35 1.8
tr|Q0S7L0|Q0S7L0_RHOSR Probable 2-nitropropane dioxygenase OS=Rh... 35 2.4
tr|A8M6F0|A8M6F0_SALAI 2-nitropropane dioxygenase NPD OS=Salinis... 35 2.4
tr|A0R4Q1|A0R4Q1_MYCS2 Dioxygenase OS=Mycobacterium smegmatis (s... 35 2.4
tr|A7SGS6|A7SGS6_NEMVE Predicted protein (Fragment) OS=Nematoste... 30 2.7
tr|B2G441|B2G441_ZYGRO Probable serine/threonine-protein kinase ... 34 3.1
tr|A4T7T0|A4T7T0_MYCGI 2-nitropropane dioxygenase, NPD OS=Mycoba... 34 4.1
tr|A1TFN5|A1TFN5_MYCVP 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 5.3
tr|A1SK92|A1SK92_NOCSJ 2-nitropropane dioxygenase, NPD OS=Nocard... 33 5.3
tr|B3GAU8|B3GAU8_WHEAT WRKY19 transcription factor OS=Triticum a... 33 5.3
tr|A6S4N8|A6S4N8_BOTFB Putative uncharacterized protein OS=Botry... 33 5.3
tr|Q1B304|Q1B304_MYCSS 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 7.0
tr|A1UM47|A1UM47_MYCSK 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 7.0
tr|Q6AUE7|Q6AUE7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 33 7.0
tr|Q10G93|Q10G93_ORYSJ DIRP family protein, expressed OS=Oryza s... 33 7.0
tr|Q10G92|Q10G92_ORYSJ DIRP family protein, expressed OS=Oryza s... 33 7.0
tr|Q0DQ40|Q0DQ40_ORYSJ Os03g0639200 protein OS=Oryza sativa subs... 33 7.0
tr|B8AN37|B8AN37_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.0
tr|B1MIL4|B1MIL4_MYCA9 Putative 2-nitropropane dioxygenase OS=My... 33 9.1
tr|Q5K7G9|Q5K7G9_CRYNE Putative uncharacterized protein OS=Crypt... 33 9.1
tr|Q55HY5|Q55HY5_CRYNE Putative uncharacterized protein OS=Crypt... 33 9.1

>tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance protein
Gpa2) OS=Solanum tuberosum GN=GPA2 PE=4 SV=1
Length = 912

Score = 37.7 bits (86), Expect = 0.28
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +2

Query: 122 FDFPYLLSIETLASSCGFTVSSASFLRSKTPIGPSATDPLAF*ILRLGLQ 271
+DF YL +E LA S ++ SSA FL++ P+G + DPL F + L L+
Sbjct: 693 YDFRYLYQLEKLAFSTYYS-SSACFLKNTAPLGSTPQDPLRFQMETLHLE 741


>tr|A7R7F0|A7R7F0_VITVI Chromosome undetermined scaffold_1732, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00009968001 PE=3 SV=1
Length = 426

Score = 35.0 bits (79), Expect = 1.8
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2

Query: 68 PPTSGSFSNSFEVDPSTSFD-FPYLLSIETLASSCGFTVSSASFLR 202
PPT+ + + +PS SFD FPYL S++T +S+C + F R
Sbjct: 48 PPTTSYIDHISQTNPSISFDRFPYL-SVDTSSSTCNIVAVFSEFFR 92


>tr|Q0S7L0|Q0S7L0_RHOSR Probable 2-nitropropane dioxygenase
OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04690 PE=4
SV=1
Length = 371

Score = 34.7 bits (78), Expect = 2.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134
++ G+P R L W DA+ P+P P+ L + VS +H
Sbjct: 281 IYSGKPARLLKTKWTDAWSKPDAPAPLPMPLQNLLVSEAH 320


>tr|A8M6F0|A8M6F0_SALAI 2-nitropropane dioxygenase NPD
OS=Salinispora arenicola (strain CNS-205) GN=Sare_2835
PE=4 SV=1
Length = 373

Score = 34.7 bits (78), Expect = 2.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSHT 137
++ G+P R L W DA+ P P P+ L + V+ +HT
Sbjct: 274 VYTGKPARLLRNRWTDAWSEEAAPRPLPMPLQNLLVAEAHT 314


>tr|A0R4Q1|A0R4Q1_MYCS2 Dioxygenase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=MSMEG_5913 PE=4 SV=1
Length = 373

Score = 34.7 bits (78), Expect = 2.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134
++ G+P R L W DA+ + P P P+ L + VS +H
Sbjct: 281 IYTGKPARLLKTKWTDAWDAPEAPEPLPMPLQNILVSEAH 320


>tr|A7SGS6|A7SGS6_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g117862 PE=4 SV=1
Length = 263

Score = 29.6 bits (65), Expect(2) = 2.7
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +3

Query: 36 RFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSHTC*V*KH*LPPVASL---YHQHPSCAQ 206
R+ H Q + H R HQQ +H H P V L YHQHP
Sbjct: 73 RYYHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRY----HQHPQVTYLTHRYHQHPQVTH 128

Query: 207 RHPLVHLQLT 236
R+ H Q+T
Sbjct: 129 RYHHQHPQVT 138



Score = 23.9 bits (50), Expect(2) = 2.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 343 HPSKTHQVHRHP 378
HP TH+ H+HP
Sbjct: 134 HPQVTHRYHQHP 145



Score = 28.1 bits (61), Expect(2) = 9.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3

Query: 153 H*LPPVASLYHQHPSCAQRHPLVHLQLT 236
H P V YHQHP R+ H Q+T
Sbjct: 23 HQHPQVTHRYHQHPQVTHRYQYQHPQVT 50



Score = 23.5 bits (49), Expect(2) = 9.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1

Query: 343 HPSKTHQVHRHP 378
HP TH H+HP
Sbjct: 57 HPQVTHHYHQHP 68


>tr|B2G441|B2G441_ZYGRO Probable serine/threonine-protein kinase KCC4
and Serine/threonine-protein kinase GIN4
OS=Zygosaccharomyces rouxii GN=Zr_KCC4 and Zr_GIN4 PE=4
SV=1
Length = 1189

Score = 34.3 bits (77), Expect = 3.1
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3

Query: 129 KSKLVDGSTSKELEKEPDVGGRHPARKHARISLACPPREDQQD 1
KSKL D S++ E E E +V GR + KH+ I A R + D
Sbjct: 962 KSKLQDNSSNPEQEVEEEVAGREGSVKHSAIDTASKERSKRTD 1004


>tr|A4T7T0|A4T7T0_MYCGI 2-nitropropane dioxygenase, NPD
OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1544
PE=4 SV=1
Length = 373

Score = 33.9 bits (76), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134
++ G+P R L + W DA+ P P P+ L + VS +H
Sbjct: 281 IYTGKPARLLKSRWTDAWDAEGAPEPLPMPLQNILVSEAH 320


>tr|A1TFN5|A1TFN5_MYCVP 2-nitropropane dioxygenase, NPD
OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
GN=Mvan_5214 PE=4 SV=1
Length = 373

Score = 33.5 bits (75), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134
++ G+P R L + W DA+ P P P+ L + VS +H
Sbjct: 281 IYTGKPARLLKSRWTDAWDADGAPEPLPMPLQNILVSEAH 320


>tr|A1SK92|A1SK92_NOCSJ 2-nitropropane dioxygenase, NPD
OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=Noca_2724 PE=4 SV=1
Length = 367

Score = 33.5 bits (75), Expect = 5.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3

Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134
++ G+P R L W +A+ P P P+ L + V+ +H
Sbjct: 276 IYTGKPARLLKTKWTEAWAEQDAPEPLPMPLQNLLVADAH 315