BP916885 |
Clone id |
YMU001_000093_B12 |
Library |
YMU01 |
Length |
380 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_B12. |
Accession |
BP916885 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2548Contig1 |
Sequence |
GTCCTGTTGGTCTTCTCTGGGTGGGCAGGCCAAAGAGATTCTTGCATGCTTCCTGGCAGG ATGCCTACCTCCCACATCAGGTTCCTTCTCCAACTCCTTTGAGGTTGACCCATCAACAAG TTTCGACTTCCCATACTTGTTAAGTATAGAAACATTAGCTTCCTCCTGTGGCTTCACTGT ATCATCAGCATCCTTCCTGCGCTCAAAGACACCCATTGGTCCATCTGCAACTGACCCTCT AGCCTTCTGAATCCTTCGGCTAGGCCTTCAACTGCGGACACCTCAAGGGGTCTGGTGGCA ACTCTTCAGATTCAAGTACCCCTTCTCTTGTGCCTAGCAGATCACCCATCGAAAACCCAT CAGGTACATAGACACCCTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2RJY0 |
Definition |
sp|A2RJY0|PUR9_LACLM Bifunctional purine biosynthesis protein purH OS=Lactococcus lactis subsp. cremoris (strain MG1363) |
Align length |
77 |
Score (bit) |
35.4 |
E-value |
0.088 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9S7Q4 |
Definition |
tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance protein Gpa2) OS=Solanum tuberosum |
Align length |
50 |
Score (bit) |
37.7 |
E-value |
0.28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916885|Adiantum capillus-veneris mRNA, clone: YMU001_000093_B12. (380 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance prote... 38 0.28 tr|A7R7F0|A7R7F0_VITVI Chromosome undetermined scaffold_1732, wh... 35 1.8 tr|Q0S7L0|Q0S7L0_RHOSR Probable 2-nitropropane dioxygenase OS=Rh... 35 2.4 tr|A8M6F0|A8M6F0_SALAI 2-nitropropane dioxygenase NPD OS=Salinis... 35 2.4 tr|A0R4Q1|A0R4Q1_MYCS2 Dioxygenase OS=Mycobacterium smegmatis (s... 35 2.4 tr|A7SGS6|A7SGS6_NEMVE Predicted protein (Fragment) OS=Nematoste... 30 2.7 tr|B2G441|B2G441_ZYGRO Probable serine/threonine-protein kinase ... 34 3.1 tr|A4T7T0|A4T7T0_MYCGI 2-nitropropane dioxygenase, NPD OS=Mycoba... 34 4.1 tr|A1TFN5|A1TFN5_MYCVP 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 5.3 tr|A1SK92|A1SK92_NOCSJ 2-nitropropane dioxygenase, NPD OS=Nocard... 33 5.3 tr|B3GAU8|B3GAU8_WHEAT WRKY19 transcription factor OS=Triticum a... 33 5.3 tr|A6S4N8|A6S4N8_BOTFB Putative uncharacterized protein OS=Botry... 33 5.3 tr|Q1B304|Q1B304_MYCSS 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 7.0 tr|A1UM47|A1UM47_MYCSK 2-nitropropane dioxygenase, NPD OS=Mycoba... 33 7.0 tr|Q6AUE7|Q6AUE7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 33 7.0 tr|Q10G93|Q10G93_ORYSJ DIRP family protein, expressed OS=Oryza s... 33 7.0 tr|Q10G92|Q10G92_ORYSJ DIRP family protein, expressed OS=Oryza s... 33 7.0 tr|Q0DQ40|Q0DQ40_ORYSJ Os03g0639200 protein OS=Oryza sativa subs... 33 7.0 tr|B8AN37|B8AN37_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.0 tr|B1MIL4|B1MIL4_MYCA9 Putative 2-nitropropane dioxygenase OS=My... 33 9.1 tr|Q5K7G9|Q5K7G9_CRYNE Putative uncharacterized protein OS=Crypt... 33 9.1 tr|Q55HY5|Q55HY5_CRYNE Putative uncharacterized protein OS=Crypt... 33 9.1
>tr|Q9S7Q4|Q9S7Q4_SOLTU NBS-LRR protein (Disease resistance protein Gpa2) OS=Solanum tuberosum GN=GPA2 PE=4 SV=1 Length = 912
Score = 37.7 bits (86), Expect = 0.28 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +2
Query: 122 FDFPYLLSIETLASSCGFTVSSASFLRSKTPIGPSATDPLAF*ILRLGLQ 271 +DF YL +E LA S ++ SSA FL++ P+G + DPL F + L L+ Sbjct: 693 YDFRYLYQLEKLAFSTYYS-SSACFLKNTAPLGSTPQDPLRFQMETLHLE 741
>tr|A7R7F0|A7R7F0_VITVI Chromosome undetermined scaffold_1732, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009968001 PE=3 SV=1 Length = 426
Score = 35.0 bits (79), Expect = 1.8 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +2
Query: 68 PPTSGSFSNSFEVDPSTSFD-FPYLLSIETLASSCGFTVSSASFLR 202 PPT+ + + +PS SFD FPYL S++T +S+C + F R Sbjct: 48 PPTTSYIDHISQTNPSISFDRFPYL-SVDTSSSTCNIVAVFSEFFR 92
>tr|Q0S7L0|Q0S7L0_RHOSR Probable 2-nitropropane dioxygenase OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04690 PE=4 SV=1 Length = 371
Score = 34.7 bits (78), Expect = 2.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134 ++ G+P R L W DA+ P+P P+ L + VS +H Sbjct: 281 IYSGKPARLLKTKWTDAWSKPDAPAPLPMPLQNLLVSEAH 320
>tr|A8M6F0|A8M6F0_SALAI 2-nitropropane dioxygenase NPD OS=Salinispora arenicola (strain CNS-205) GN=Sare_2835 PE=4 SV=1 Length = 373
Score = 34.7 bits (78), Expect = 2.4 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSHT 137 ++ G+P R L W DA+ P P P+ L + V+ +HT Sbjct: 274 VYTGKPARLLRNRWTDAWSEEAAPRPLPMPLQNLLVAEAHT 314
>tr|A0R4Q1|A0R4Q1_MYCS2 Dioxygenase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_5913 PE=4 SV=1 Length = 373
Score = 34.7 bits (78), Expect = 2.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134 ++ G+P R L W DA+ + P P P+ L + VS +H Sbjct: 281 IYTGKPARLLKTKWTDAWDAPEAPEPLPMPLQNILVSEAH 320
>tr|A7SGS6|A7SGS6_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g117862 PE=4 SV=1 Length = 263
Score = 29.6 bits (65), Expect(2) = 2.7 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 3/70 (4%) Frame = +3
Query: 36 RFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSHTC*V*KH*LPPVASL---YHQHPSCAQ 206 R+ H Q + H R HQQ +H H P V L YHQHP Sbjct: 73 RYYHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRY----HQHPQVTYLTHRYHQHPQVTH 128
Query: 207 RHPLVHLQLT 236 R+ H Q+T Sbjct: 129 RYHHQHPQVT 138
Score = 23.9 bits (50), Expect(2) = 2.7 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1
Query: 343 HPSKTHQVHRHP 378 HP TH+ H+HP Sbjct: 134 HPQVTHRYHQHP 145
Score = 28.1 bits (61), Expect(2) = 9.4 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +3
Query: 153 H*LPPVASLYHQHPSCAQRHPLVHLQLT 236 H P V YHQHP R+ H Q+T Sbjct: 23 HQHPQVTHRYHQHPQVTHRYQYQHPQVT 50
Score = 23.5 bits (49), Expect(2) = 9.4 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = +1
Query: 343 HPSKTHQVHRHP 378 HP TH H+HP Sbjct: 57 HPQVTHHYHQHP 68
>tr|B2G441|B2G441_ZYGRO Probable serine/threonine-protein kinase KCC4 and Serine/threonine-protein kinase GIN4 OS=Zygosaccharomyces rouxii GN=Zr_KCC4 and Zr_GIN4 PE=4 SV=1 Length = 1189
Score = 34.3 bits (77), Expect = 3.1 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -3
Query: 129 KSKLVDGSTSKELEKEPDVGGRHPARKHARISLACPPREDQQD 1 KSKL D S++ E E E +V GR + KH+ I A R + D Sbjct: 962 KSKLQDNSSNPEQEVEEEVAGREGSVKHSAIDTASKERSKRTD 1004
>tr|A4T7T0|A4T7T0_MYCGI 2-nitropropane dioxygenase, NPD OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1544 PE=4 SV=1 Length = 373
Score = 33.9 bits (76), Expect = 4.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134 ++ G+P R L + W DA+ P P P+ L + VS +H Sbjct: 281 IYTGKPARLLKSRWTDAWDAEGAPEPLPMPLQNILVSEAH 320
>tr|A1TFN5|A1TFN5_MYCVP 2-nitropropane dioxygenase, NPD OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_5214 PE=4 SV=1 Length = 373
Score = 33.5 bits (75), Expect = 5.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134 ++ G+P R L + W DA+ P P P+ L + VS +H Sbjct: 281 IYTGKPARLLKSRWTDAWDADGAPEPLPMPLQNILVSEAH 320
>tr|A1SK92|A1SK92_NOCSJ 2-nitropropane dioxygenase, NPD OS=Nocardioides sp. (strain BAA-499 / JS614) GN=Noca_2724 PE=4 SV=1 Length = 367
Score = 33.5 bits (75), Expect = 5.3 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3
Query: 15 LWVGRPKRFLHASWQDAYLPHQVPSPTPLRLTHQQVSTSH 134 ++ G+P R L W +A+ P P P+ L + V+ +H Sbjct: 276 IYTGKPARLLKTKWTEAWAEQDAPEPLPMPLQNLLVADAH 315
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