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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916889
Clone id YMU001_000093_C04
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTCCAAAACCAGTGAGTTTACATAAATGTCACTCTGCAACAAAACAAGAGCATAATTAAA
CATGGTAATACAAACCAAACATCACATAAAAACAAACCACACTTTGAAGAAGTCCATAAT
AGTAATAGTCTCAAGAGACAAGGGCCTCACTAGTCATATGGATTGAAACCTGCAAGTGGA
TCCACCTCATCATCTGCCTGCGGCCTACTAACATTGTCATGGCTGCTCTGTTGCATGTAA
GCCAAAAGGAGAGGCTCTACATACGTGGTCATCAAGAATGTATCCACATCGATAGATGCA
CATACTCTACCAGTGTGCATGCATGTCTTAAGAATAGGTGCAGTACCACATCCCATCTCA
ATGCACACACCACCTCGACGACAATACAGGTATAGAAAGCATGCTAAAAATGTATGACTC
CTCTCTAGTCCCCCACGCCACTGCTGCCCGACGGGATCCAAAGTACGCAAGTCATCCGGA
AGATAATGATAGGCGAGGGTATCTAAAGGATACATGCCGAAGGACTCAAAGAGGGGTGTA
CTCT
■■Homology search results ■■ -
sp_hit_id Q8AAZ8
Definition sp|Q8AAZ8|PRMA_BACTN Ribosomal protein L11 methyltransferase OS=Bacteroides thetaiotaomicron
Align length 71
Score (bit) 32.3
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916889|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_C04.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8AAZ8|PRMA_BACTN Ribosomal protein L11 methyltransferase OS=...    32   1.5  
sp|A5D6W6|FIT1_HUMAN Fat-inducing protein 1 OS=Homo sapiens GN=F...    31   3.4  
sp|A7YWN2|FIT1_BOVIN Fat-inducing protein 1 OS=Bos taurus GN=FIT...    31   3.4  
sp|B2MVP8|FIT1_PIG Fat-inducing protein 1 OS=Sus scrofa GN=FIT1 ...    31   4.5  
sp|Q91V79|FIT1_MOUSE Fat-inducing protein 1 OS=Mus musculus GN=F...    31   4.5  
sp|Q4R7B7|ANTRL_MACFA Anthrax toxin receptor-like OS=Macaca fasc...    31   4.5  
sp|P34367|YLJ2_CAEEL Uncharacterized protein C50C3.2 OS=Caenorha...    30   5.8  
sp|Q7M725|TR107_MOUSE Taste receptor type 2 member 107 OS=Mus mu...    30   7.6  
sp|P00745|PROC_BOVIN Vitamin K-dependent protein C (Fragment) OS...    30   7.6  
sp|P18160|KYK1_DICDI Dual specificity protein kinase dpyk1 OS=Di...    30   7.6  
sp|Q28315|PROC_CAPHI Vitamin K-dependent protein C (Fragment) OS...    30   9.9  

>sp|Q8AAZ8|PRMA_BACTN Ribosomal protein L11 methyltransferase
           OS=Bacteroides thetaiotaomicron GN=prmA PE=3 SV=1
          Length = 280

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 362 IEMGCGTAPI-LKTCMHTGRVCASIDVDTFLMTTYVEPLLLAYMQQSSHDNVSRPQADDE 186
           ++MGCGT+ + +   M   R C +ID+D + +   +E + L ++     D+++  Q D  
Sbjct: 149 LDMGCGTSILAILARMRGARPCIAIDIDEWCVRNSIENIELNHV-----DDIAVSQGD-- 201

Query: 185 VDPLAGFNPYD 153
              L G  P+D
Sbjct: 202 ASSLVGKGPFD 212


>sp|A5D6W6|FIT1_HUMAN Fat-inducing protein 1 OS=Homo sapiens GN=FIT1
           PE=1 SV=1
          Length = 292

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -3

Query: 497 LAYHYLPDDLRTLDPVGQQWRGGLERSHTFLACFLYL 387
           L  H LPD  R+    G QWRG    SHTFL  F  L
Sbjct: 160 LLLHELPDR-RSCLAAGHQWRGYTVSSHTFLLTFCCL 195


>sp|A7YWN2|FIT1_BOVIN Fat-inducing protein 1 OS=Bos taurus GN=FIT1
           PE=2 SV=1
          Length = 292

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -3

Query: 497 LAYHYLPDDLRTLDPVGQQWRGGLERSHTFLACFLYL 387
           L  H LPD  R+    G QWRG    SHTFL  F  L
Sbjct: 160 LLLHELPDR-RSCLAAGHQWRGYTVSSHTFLLTFCCL 195


>sp|B2MVP8|FIT1_PIG Fat-inducing protein 1 OS=Sus scrofa GN=FIT1
           PE=2 SV=1
          Length = 290

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = -3

Query: 497 LAYHYLPDDLRTLDPVGQQWRGGLERSHTFLACFLYL 387
           L  H LPD    L   G QWRG    SHTFL  F  L
Sbjct: 160 LLLHELPDRRSRL-AAGHQWRGYTVSSHTFLLTFCCL 195


>sp|Q91V79|FIT1_MOUSE Fat-inducing protein 1 OS=Mus musculus GN=Fit1
           PE=1 SV=1
          Length = 292

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = -3

Query: 497 LAYHYLPDDLRTLDPVGQQWRGGLERSHTFLACFLYL 387
           L  H LPD    L   G QWRG    SHTFL  F  L
Sbjct: 160 LLLHELPDRKSCL-AAGHQWRGYTVSSHTFLLTFCCL 195


>sp|Q4R7B7|ANTRL_MACFA Anthrax toxin receptor-like OS=Macaca
           fascicularis GN=ANTXRL PE=2 SV=1
          Length = 557

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 113 TSSKCGLFLCDVWFVLPCLIM-LLFCC 36
           TSS CG+F   ++F+LP L++ LL CC
Sbjct: 342 TSSTCGIFSNWLYFLLPLLLLPLLLCC 368


>sp|P34367|YLJ2_CAEEL Uncharacterized protein C50C3.2
            OS=Caenorhabditis elegans GN=C50C3.2/C50C3.3 PE=2 SV=2
          Length = 2107

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 338  VQYHIPSQCTHHLDDNTGIESMLKMYD----SSLVPHATAARRDPKYASHPEDNDRRGYL 505
            V+Y +  + T+ LDD++ IE  LK  D    S  +P   A     K A H E +  + YL
Sbjct: 2038 VRYMVKHETTNILDDHSAIEDALKNLDARKISDSMPRKEAEFFMSKIAKHAETSSDQVYL 2097

Query: 506  K 508
            +
Sbjct: 2098 E 2098


>sp|Q7M725|TR107_MOUSE Taste receptor type 2 member 107 OS=Mus
           musculus GN=Tas2r107 PE=2 SV=1
          Length = 308

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/68 (19%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = -1

Query: 253 LSFWLTCNRAAMTMLVGRRQMMR---WIHLQVSIHMTSEALVS*DYYYYGLLQSVVCFYV 83
           L+ WL C      +L   +   R   W+H + +  + ++++ +   +++ ++  + CF +
Sbjct: 138 LTSWLLCFPQMTKILQNSKMHQRNTSWVHQRKNYFLINQSVTNLGIFFFIIVSLITCFLL 197

Query: 82  MFGLYYHV 59
           +  L+ HV
Sbjct: 198 IVFLWRHV 205


>sp|P00745|PROC_BOVIN Vitamin K-dependent protein C (Fragment)
           OS=Bos taurus GN=PROC PE=1 SV=1
          Length = 456

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = -2

Query: 498 PRLSLSSG*LAYFGSRRAAVAWGTREES-----YIFSMLSIPVLSSRWCVH 361
           P   LS   L   G       WG R+E+     ++ S + +PV+    CVH
Sbjct: 320 PDSGLSERKLTQVGQETVVTGWGYRDETKRNRTFVLSFIKVPVVPYNACVH 370


>sp|P18160|KYK1_DICDI Dual specificity protein kinase dpyk1
            OS=Dictyostelium discoideum GN=splA PE=1 SV=3
          Length = 2410

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 22   INVTLQQNKSIIKHGNTNQTSHKNK-PHFEEVHNSNSLKRQGPH*SYGLKPASGSTSSSA 198
            IN T   N S   + N N  S+ N   +   ++N+N+      +     KP+ GST  S+
Sbjct: 1315 INNTTNNNNSNSNNNNNNNNSNSNSNSNNNNINNNNNNNNNNNNIYLTKKPSIGSTDESS 1374

Query: 199  CGLL 210
             G L
Sbjct: 1375 TGSL 1378
tr_hit_id Q59MN6
Definition tr|Q59MN6|Q59MN6_CANAL Putative uncharacterized protein OS=Candida albicans
Align length 29
Score (bit) 35.0
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916889|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_C04.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q59MN6|Q59MN6_CANAL Putative uncharacterized protein OS=Candi...    35   2.6  
tr|A4S4W5|A4S4W5_OSTLU Predicted protein (Fragment) OS=Ostreococ...    35   3.3  
tr|A9RV11|A9RV11_PHYPA Predicted protein (Fragment) OS=Physcomit...    34   4.4  
tr|Q59MP9|Q59MP9_CANAL Putative uncharacterized protein OS=Candi...    34   4.4  
tr|B7WNX1|B7WNX1_HUMAN Putative uncharacterized protein ENSP0000...    34   5.7  
tr|A8QGD8|A8QGD8_BRUMA Putative uncharacterized protein (Fragmen...    33   7.6  
tr|A7QT11|A7QT11_VITVI Chromosome chr14 scaffold_164, whole geno...    33   9.7  
tr|A8NI37|A8NI37_COPC7 Putative uncharacterized protein OS=Copri...    33   9.7  
tr|B6XZM7|B6XZM7_ANATH ABC transporter related protein OS=Anaero...    33   9.9  

>tr|Q59MN6|Q59MN6_CANAL Putative uncharacterized protein OS=Candida
           albicans GN=CaO19.8358 PE=4 SV=1
          Length = 123

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 61  HGNTNQTSHKNKPHFEEVHNSNSLKRQGP 147
           H NTN  SH NK H +  H S+SL R  P
Sbjct: 86  HSNTNHNSHNNKHHIQLNHQSHSLTRINP 114


>tr|A4S4W5|A4S4W5_OSTLU Predicted protein (Fragment) OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_93465 PE=4 SV=1
          Length = 278

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
 Frame = -3

Query: 458 DPVGQQWRGGLERSH-------TFLACFLYLYCRRGGV----CIEMGCGTAPILKTCMHT 312
           DP G   +GG ER         TF+     L   RG      C++ GCGT  +L TC  T
Sbjct: 23  DPFGTNKKGGRERGMRKRNQVMTFVKHLRALLSLRGRREIKRCVDFGCGTGNVLMTCAAT 82

Query: 311 GRVCASIDVDTFLMTTYVEPLLLAYMQQSSHDNVS 207
                 + VD  L  T +E +L + +++S   NVS
Sbjct: 83  FPEIDFVGVD--LNATSIE-ILNSRIRKSGLTNVS 114


>tr|A9RV11|A9RV11_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_161140 PE=4 SV=1
          Length = 379

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = -3

Query: 242 AYMQQSSHDNVSRPQA--DDEVDPLAGFNPYD**GPCXXXXXXLWTS----SKCGLFLCD 81
           A +QQ ++++  RP A  D+ +DPL  FN Y   G         W S       G  +  
Sbjct: 87  ALLQQVTNESNFRPLALRDNRIDPLDNFNKYR--GGYDIKNKHYWASVIFTGIYGYAIAA 144

Query: 80  VWFVLPCLIMLLFCCR 33
            W  L  L++L  CC+
Sbjct: 145 AWLALGLLLLLFACCK 160


>tr|Q59MP9|Q59MP9_CANAL Putative uncharacterized protein OS=Candida
           albicans GN=CaO19.739 PE=4 SV=1
          Length = 177

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 10  Q*VYINVTLQQNKSIIKHGNTNQTSHKNKPHFEEVHNSNSLKRQGP 147
           Q +++N  +Q + +   H NTN  SH NK H +  H S+ L R  P
Sbjct: 66  QVIWLNRHIQYHSN---HSNTNHNSHNNKHHIQLNHQSHPLTRINP 108


>tr|B7WNX1|B7WNX1_HUMAN Putative uncharacterized protein
           ENSP00000369593 OS=Homo sapiens PE=4 SV=1
          Length = 406

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
 Frame = +3

Query: 234 HVSQKERLYIRGHQECIHIDRCTYST-------------SVHACLKNRCSTTSHLNAHTT 374
           H+     +++  H  C HI  CTY+                H C+     T  H+  HTT
Sbjct: 109 HIHIHVHIHMNIHHTCTHIYTCTYTVVCTHTHMHIYTHVHTHTCIHIHSDTHLHIYTHTT 168

Query: 375 STTIQV 392
            T  Q+
Sbjct: 169 CTQTQI 174


>tr|A8QGD8|A8QGD8_BRUMA Putative uncharacterized protein (Fragment)
           OS=Brugia malayi GN=Bm1_55070 PE=4 SV=1
          Length = 608

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +1

Query: 31  TLQQNKSIIKHGNTNQTSHKNKP----HFEEVHNSNSLK 135
           T+ Q       GN NQ S +N P    HFEE  NSN+LK
Sbjct: 184 TIAQETLTQPEGNANQKSEENLPEQSEHFEEAKNSNNLK 222


>tr|A7QT11|A7QT11_VITVI Chromosome chr14 scaffold_164, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006118001
           PE=4 SV=1
          Length = 827

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 506 LDTLAYHYLPDDLRTLDPVGQQWRGGLERSH 414
           +D L  H LPD+  ++DP+G +WR  L  SH
Sbjct: 169 VDGLHDHLLPDEALSVDPLGHRWRVPLSWSH 199


>tr|A8NI37|A8NI37_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_01575 PE=4 SV=1
          Length = 279

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
 Frame = -3

Query: 503 DTLAYHYLPDDLRTLD------PVGQQWRGGLERSHTFLACFLYLYCRRGGVCIEMGCGT 342
           D +  HY  DD+R  +      P    W+   +++      F +   R GG+    G GT
Sbjct: 159 DKIPEHYNEDDIRQSERIRKVIPAYMHWKYEADKNLVQRTAFKWTILRPGGLTDNPGTGT 218

Query: 341 APILKTCMHTGRVCASIDV 285
           A I +T  H G+V +  DV
Sbjct: 219 ASIGRT--HLGQVISRDDV 235


>tr|B6XZM7|B6XZM7_ANATH ABC transporter related protein
           OS=Anaerocellum thermophilum DSM 6725 GN=AtheDRAFT_0678
           PE=4 SV=1
          Length = 561

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
 Frame = +1

Query: 22  INVTLQQNKSIIKHGNTNQTSHKNKPHFEEV--------HNSNSLKRQGPH*SYGLKPAS 177
           +N  L  N + IK  NT++  H  +  F+ V         NS+S   QG +         
Sbjct: 312 LNEFLLNNTNNIKIENTSEMLHFGELDFKIVIEDLWFKYENSDSYVLQGINLIIEPNSII 371

Query: 178 GSTSSSACGLLTLSWLLCCM*AKRRGSTYVVIKNVS 285
           G    S CG  T   LLC +    RGS  +  KN+S
Sbjct: 372 GIIGESGCGKSTFLKLLCGLYKPERGSITICGKNIS 407