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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916902
Clone id YMU001_000093_D06
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATCCCAACAGCACAAACTTTGGACCGAAAAGATTACATGCCGCACAAGGGGAGGAGTTT
GAGGCTCCATCATCGGCCGCTCAAGGGCCACCACCAAAAAATAAAGGACTACCAATTTCA
CCAAGCGCTCTGATGGAAGAGCAAACTGTGCGAACCACGCTGCAGCTCCTTCCTGACATC
CAACCATAACCCCAACGAGTCTTCCTCAACATATGCCTGATTCTCCTTGAGAGCCAAGAA
GAACGAACCCATCCGCTCCTAACTAGACATTTGCCATAACCCACAATCGGGAGCAAGCAA
CCTCAAAACAGCTCTGAATACTCTCTTCCTCGTTCCACAGAACTGACATTCATGACATTA
CGGGAGAAAAACTCTGACCAATTCAGCTCGTCTCCAGCTGCTCTCAAAAATTTGACAAGG
ATACCACGACAAAGCAAAAAACCAAATGTGCGCCTAGACCAGACCCTTCCTCACCCTGCT
CAAATACTCCTTCATCCTTGAACTTAATCTGTCCCATCTCCACCCTGCTCATAACCGTTG
GCGGCATCCAAT
■■Homology search results ■■ -
sp_hit_id Q68A65
Definition sp|Q68A65|SPT21_RAT Spermatogenesis-associated protein 21 OS=Rattus norvegicus
Align length 169
Score (bit) 32.3
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916902|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_D06.
         (552 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68A65|SPT21_RAT Spermatogenesis-associated protein 21 OS=Rat...    32   1.6  
sp|P24730|Y132_NPVAC Uncharacterized 25.1 kDa protein in PP34-EX...    32   2.1  
sp|Q60591|NFAC2_MOUSE Nuclear factor of activated T-cells, cytop...    32   2.7  
sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyce...    31   3.5  
sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 ...    31   4.6  
sp|Q75BI6|MED15_ASHGO Mediator of RNA polymerase II transcriptio...    31   4.6  
sp|Q7Z1I0|CUPF_DICDI Calcium up-regulated protein F OS=Dictyoste...    31   4.6  
sp|Q8N888|BCOR2_HUMAN BCoR-like protein 2 OS=Homo sapiens GN=BCO...    30   6.0  
sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyosteliu...    30   7.8  
sp|Q09948|RSC4_SCHPO Chromatin structure-remodeling complex subu...    30   7.9  

>sp|Q68A65|SPT21_RAT Spermatogenesis-associated protein 21 OS=Rattus
           norvegicus GN=Spata21 PE=2 SV=1
          Length = 685

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 44/169 (26%), Positives = 63/169 (37%), Gaps = 18/169 (10%)
 Frame = +1

Query: 31  RLHAAQGEEFEAPSSAAQGPPPKNKGLPISPS---------ALMEEQTVRTTXXXXXXXX 183
           R H  +GE  E+ +S    PPP +   P  P             ++Q             
Sbjct: 226 RTHKDRGEAVESKASPRPPPPPPSPPPPPPPEERDVEKKELGQGQKQRQPALAAAGTQGP 285

Query: 184 XXXXRVFLNICLILLESQEERTH-------PLLTRHLP--*PTIGSKQPQNSSEYSLPRS 336
               R F+  CL+ +E QEE TH        L  R  P    ++ +  P NSS   LP  
Sbjct: 286 GNFRRGFMK-CLLEVEEQEEATHRRTLKSRALTARRSPKTVTSVPTSGPVNSSVPPLP-- 342

Query: 337 TELTFMTLREKNSDQFSSSPAALKNLTRIPRQSKKPNVRLDQTLPHPAQ 483
                 TL E ++   ++ P+ +K     P Q+  P       LP PAQ
Sbjct: 343 -----PTLHEPSTSAPATVPSWVK--PPAPGQAPIPMGTPSSVLPTPAQ 384


>sp|P24730|Y132_NPVAC Uncharacterized 25.1 kDa protein in PP34-EXO
           intergenic region OS=Autographa californica nuclear
           polyhedrosis virus PE=4 SV=1
          Length = 219

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +1

Query: 88  PPPKNKGLPISPSALMEEQTVRTTXXXXXXXXXXXXRVF-----LNICLILLESQEERTH 252
           PP K++ L     A+  EQT+RTT             VF     L   +++LE++++R +
Sbjct: 25  PPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNPGESAVFQELERLENAVVVLENEQKRLY 84

Query: 253 PLL 261
           P+L
Sbjct: 85  PIL 87


>sp|Q60591|NFAC2_MOUSE Nuclear factor of activated T-cells,
           cytoplasmic 2 OS=Mus musculus GN=Nfatc2 PE=1 SV=2
          Length = 927

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +1

Query: 37  HAAQGEEFEAPSSAAQGPPPKNKGLPISPSA---LMEEQT 147
           H    E F  PSSA  GPPP N+G  +SP A   ++++QT
Sbjct: 834 HIMYCENF-GPSSARPGPPPINQGQRLSPGAYPTVIQQQT 872


>sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyces
           lactis GN=ATG7 PE=3 SV=1
          Length = 603

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 428 DKAKNQMCA*TRPFLTLLKYSFILELNLSHLHPAHN 535
           D+  +QMC  TRP + LL  S  +EL +++L P+ N
Sbjct: 478 DRTLDQMCTVTRPGVALLAASQAVELLVTYLQPSTN 513


>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1
           OS=Mus musculus GN=Morc1 PE=2 SV=1
          Length = 950

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
 Frame = +1

Query: 223 LLESQEERTHPLLTRHLP*-------------PTIGSKQPQNSS-EYSLPRSTELTFMTL 360
           L+E+Q +++  ++T  +P                +G  QP  +      P S +L+FM  
Sbjct: 561 LVEAQPQKSQLIVTSKIPEFKSSCLSSALKEKSKLGRIQPSGADLTQGSPSSVKLSFMQR 620

Query: 361 REKNSDQFSSSPAALKNLTRIPRQSKKPNVRLDQTLPHPA 480
            +K S + + S      +T+IP++S K  V+  Q    PA
Sbjct: 621 SQKRSTEDTHSDVEFICMTKIPKKSVKKTVKYLQPGHAPA 660


>sp|Q75BI6|MED15_ASHGO Mediator of RNA polymerase II transcription
           subunit 15 OS=Ashbya gossypii GN=GAL11 PE=3 SV=1
          Length = 1323

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 301 PQNSSEYSLPRSTELTFMTLREKNSDQFSSSPAALKNLT 417
           PQ + + +LPR TE   M L+  NS + + SP  L N+T
Sbjct: 777 PQQTPKITLPRPTEQDMMILKRINS-EVAKSPLRLSNIT 814


>sp|Q7Z1I0|CUPF_DICDI Calcium up-regulated protein F
           OS=Dictyostelium discoideum GN=cupF PE=2 SV=2
          Length = 769

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 292 SKQPQNSSEYSLPRSTELTFMTLREKNSDQFSSSPAALKNLTRIPRQ 432
           SKQ   +S Y    +T +T+  + +K S  F  S   +KN T +P Q
Sbjct: 616 SKQEVFTSSYGWNLATSVTYYNMVDKYSGMFKLSFPTVKNFTSVPMQ 662


>sp|Q8N888|BCOR2_HUMAN BCoR-like protein 2 OS=Homo sapiens GN=BCORL2
           PE=2 SV=1
          Length = 145

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 52  EEFEAPSSAAQGPPPKNKGLPISPSA 129
           EEF  PS   +GPPPKNK L  + S+
Sbjct: 20  EEFLKPSDNEEGPPPKNKVLSNNASS 45


>sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyostelium
           discoideum GN=atg7 PE=3 SV=1
          Length = 707

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 428 DKAKNQMCA*TRPFLTLLKYSFILELNLSHLH 523
           D+  +QMC  TRP L+++  S  +EL +S +H
Sbjct: 556 DRTLDQMCTVTRPGLSMMASSIAVELLISTIH 587


>sp|Q09948|RSC4_SCHPO Chromatin structure-remodeling complex subunit
           rsc4 OS=Schizosaccharomyces pombe GN=rsc4 PE=1 SV=1
          Length = 542

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
 Frame = +1

Query: 205 LNICLILLESQEERTH-PLLTRHLP*PTIGSKQPQNSSEYSLPRSTEL--TFMTLREKNS 375
           L+  LI   S++ + H P  ++H P  T  S  P  S+  S  RST +  +F+T     S
Sbjct: 241 LSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSASTSRERSTSVAPSFIT-----S 295

Query: 376 DQFSSSPAALK----NLTRIPRQSKKPNVRLDQTLPHPAQIL 489
           DQ +++P  LK    ++    ++S+K    + + +P P   L
Sbjct: 296 DQ-AATPDVLKSEEAHVESFSKESEKDQTPIPEDVPSPMDTL 336
tr_hit_id A7PL42
Definition tr|A7PL42|A7PL42_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera
Align length 98
Score (bit) 35.8
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916902|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_D06.
         (552 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PL42|A7PL42_VITVI Chromosome chr7 scaffold_20, whole genome...    36   1.6  
tr|Q67W00|Q67W00_ORYSJ cDNA clone:001-018-G07, full insert seque...    35   2.7  
tr|A2YAS7|A2YAS7_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.7  
tr|B5ZPV0|B5ZPV0_RHILW Transcriptional regulator, LysR family OS...    34   4.5  
tr|B4KDC3|B4KDC3_DROMO GI10248 OS=Drosophila mojavensis GN=GI102...    34   5.9  
tr|B7PWW9|B7PWW9_IXOSC Putative uncharacterized protein (Fragmen...    34   6.0  
tr|A8XQT3|A8XQT3_CAEBR CBR-SDC-2 protein OS=Caenorhabditis brigg...    33   7.8  

>tr|A7PL42|A7PL42_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019426001
           PE=4 SV=1
          Length = 466

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
 Frame = +1

Query: 220 ILLESQEERTHPLLTRHLP*PTIGSKQPQNSSEYSLPRSTELT---FMTLREKNSDQFSS 390
           +L ++ EE +  +    +P  ++      N ++ +LP+  ++    F+T  +K +     
Sbjct: 75  LLFQANEEHSTIMTPVEIPWESLTHSNTWNFTQLTLPKPIQIRKPLFITQNDKGNVTIQF 134

Query: 391 SPAALKNLTRIPRQSKKPNVRLDQ-----TLPHPAQIL 489
            P  +    RI   S+KP+V+LD       +PHP  ++
Sbjct: 135 PPKEMGQNNRIFVNSRKPSVKLDNVDFKPNIPHPRYVM 172


>tr|Q67W00|Q67W00_ORYSJ cDNA clone:001-018-G07, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0516A04.5 PE=2 SV=1
          Length = 343

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 25  PKRLHAAQGEEFEAPSSAAQGPPPKNKGLPISPSALMEE 141
           P R  A+ G +F+AP  A QGPP   +G P  P+ +M +
Sbjct: 124 PPRGRASPGAQFQAPPPAFQGPPYIARGTPPPPAQMMPQ 162


>tr|A2YAS7|A2YAS7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22192 PE=4 SV=1
          Length = 318

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 25  PKRLHAAQGEEFEAPSSAAQGPPPKNKGLPISPSALMEE 141
           P R  A+ G +F+AP  A QGPP   +G P  P+ +M +
Sbjct: 101 PPRGRASPGAQFQAPPPAFQGPPYIARGTPPPPAQMMPQ 139


>tr|B5ZPV0|B5ZPV0_RHILW Transcriptional regulator, LysR family
           OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
           GN=Rleg2_1784 PE=4 SV=1
          Length = 301

 Score = 34.3 bits (77), Expect = 4.5
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -2

Query: 395 GDELNWSEFFSRNVMNVSSVERGREYSELF*GCLLPIVGYGKCLVRSGWVRSSWLSRRIR 216
           GD   W+E+ +++  N    ERG + +         +   G  LVR   V     S R+ 
Sbjct: 202 GDFPTWAEWLAKSGANQVPAERGLKINSTAAVIQAAVAARGVALVRKALVAQELDSGRLV 261

Query: 215 HMLRKTRWGYGW 180
           H+L   RW   W
Sbjct: 262 HLLPDVRWPVKW 273


>tr|B4KDC3|B4KDC3_DROMO GI10248 OS=Drosophila mojavensis GN=GI10248
            PE=4 SV=1
          Length = 4195

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 168  PS*HPTITPTSLPQHMPDSP*EPRRTNPSAPN*TFAITHNRE-QATSKQL*ILSSSFH 338
            P+  P +TP  LP H+   P +P   + S  + T + T  RE + TSKQL   SSSFH
Sbjct: 3753 PTVPPIVTPNDLPGHVGAPPPKPLAKHHSYDDKTLSKTQIREFKTTSKQL-RQSSSFH 3809


>tr|B7PWW9|B7PWW9_IXOSC Putative uncharacterized protein (Fragment)
           OS=Ixodes scapularis GN=IscW_ISCW008315 PE=4 SV=1
          Length = 198

 Score = 33.9 bits (76), Expect = 6.0
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +1

Query: 271 LP*PTIGSKQPQNSSEYSLPRSTELTFMTLREKNSDQFSSSPAALKNLTRIPRQSKKPNV 450
           LP P+  S  P+ SSE SLPR +  +  +L   +S+     P++  +L R   +S  P  
Sbjct: 24  LPRPSSESSLPRPSSESSLPRPSSES--SLPRPSSESSLPRPSSESSLPRPSSESSLPRP 81

Query: 451 RLDQTLPHPA 480
             + +LP P+
Sbjct: 82  SSESSLPRPS 91


>tr|A8XQT3|A8XQT3_CAEBR CBR-SDC-2 protein OS=Caenorhabditis briggsae
           GN=Cbr-sdc-2 PE=4 SV=2
          Length = 3248

 Score = 33.5 bits (75), Expect = 7.8
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
 Frame = +1

Query: 301 PQNSSEYSLPRSTELTFMTL----------REKNSDQFSSSPAALKNLTRIPRQSKKPNV 450
           PQ+S +   PR  E+T +            ++K  D++S+SP  L+ +  +P+QSKKP  
Sbjct: 213 PQSSFQQLTPREQEITSILQNSSSQSETQSKQKTVDRYSNSPEFLQPV--LPKQSKKPQQ 270

Query: 451 RLDQTL 468
           R  Q +
Sbjct: 271 RPQQKI 276