BP916906
Clone id YMU001_000093_D10
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGATTCACAACCATTGTTCCGTCAAAATGCTTAAAAGAACACTCACACTCTCAATCACA
GCCATTCCAATTGCCCGCATTGTGCCGTAGCACATAAACAATGTGAAATAAAAATACTCA
CCTCACTTTTTATATTTTTTGATGCATATCTACACAACACTTTCAGGCCCCTCCCAACAA
TATTTCCAAGTACCAATATGCACATCAAGTTCAGACAGGCTGGCATCATTTAGCATACTA
CATCACTGTCTTTTTCTTGTGACCAGCAATCGCAACTACCCCGCCAGTTACCAGAGGATC
CAAACCGGGGATAACCCATGTCAAGCAGAAACCCTTGAGAATTCCATGACAGTTACTTCC
ATCCCTTAGCTTCAGGGACGTGAGTGCAGATTGCCTCATCCACTTCTCAAACTCCTCTGT
TCCCATGCTGAACTTTGCATTTTGCTATGTGCCATTGCATAAAATCTCATGTTCCTTCAG
ATGTCTTTGGAACCTTGCAAGTCGAGCTTGTAAATTACAATGCCAGCAGCTTTCTTTGAG
AGAACATAACTC
■■Homology search results ■■ -
sp_hit_id Q8CY42
Definition sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis
Align length 71
Score (bit) 35.8
E-value 0.14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916906|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_D10.
(552 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis G... 36 0.14
sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (... 36 0.14
sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melite... 36 0.14
sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortu... 36 0.14
sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortu... 36 0.14
sp|O19133|G6PC_CANFA Glucose-6-phosphatase OS=Canis familiaris G... 31 4.6
sp|Q29RU6|G6PC_BOVIN Glucose-6-phosphatase OS=Bos taurus GN=G6PC... 31 4.6
sp|Q5DTI6|CB067_MOUSE Uncharacterized protein C2orf67 homolog OS... 30 6.0
sp|P03380|ENV_BLVJ Envelope glycoprotein OS=Bovine leukemia viru... 30 7.9
sp|P25507|ENV_BLVB5 Envelope glycoprotein OS=Bovine leukemia vir... 30 7.9
sp|P25506|ENV_BLVB2 Envelope glycoprotein OS=Bovine leukemia vir... 30 7.9
sp|P25505|ENV_BLVAV Envelope glycoprotein OS=Bovine leukemia vir... 30 7.9
sp|P25057|ENV_BLVAU Envelope glycoprotein OS=Bovine leukemia vir... 30 7.9
sp|P25504|ENV_BLVAF Envelope glycoprotein OS=Bovine leukemia vir... 30 7.9
sp|P51519|ENV_BLV Envelope glycoprotein OS=Bovine leukemia virus... 30 7.9

>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis
GN=rsh PE=1 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis
(strain ATCC 25840 / 63/290 / NCTC 10512) GN=rsh PE=3
SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella
melitensis GN=rsh PE=1 SV=2
Length = 750

Score = 35.8 bits (81), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus
GN=rsh PE=1 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus
(strain 2308) GN=rsh PE=3 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|O19133|G6PC_CANFA Glucose-6-phosphatase OS=Canis familiaris
GN=G6PC PE=1 SV=1
Length = 357

Score = 30.8 bits (68), Expect = 4.6
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1

Query: 139 LMHIYTTLSGPSQQ---YFQVPICTSSSDRLASFSILHHCL 252
L+H++ +L PSQ ++ + C S++ LAS S++ +CL
Sbjct: 305 LLHLFDSLKPPSQTELIFYTLSFCKSAAVPLASVSLIPYCL 345


>sp|Q29RU6|G6PC_BOVIN Glucose-6-phosphatase OS=Bos taurus GN=G6PC
PE=2 SV=1
Length = 357

Score = 30.8 bits (68), Expect = 4.6
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1

Query: 139 LMHIYTTLSGPSQQ---YFQVPICTSSSDRLASFSILHHCLFLVTSNRN 276
L+H++ +L PSQ ++ + C S++ LAS S++ +CL V N
Sbjct: 305 LLHLFDSLKPPSQIELIFYVLSFCKSAAVPLASVSLIPYCLAWVLGQPN 353


>sp|Q5DTI6|CB067_MOUSE Uncharacterized protein C2orf67 homolog
OS=Mus musculus GN=Kiaa4189 PE=2 SV=2
Length = 991

Score = 30.4 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2

Query: 359 PSLSFRDVSADC--LIHFSNSSVPMLNFAFCYVPLHKISCSFRCLWNLASRACKLQCQQL 532
P+L R++ L NS + LN + PL SCS +CL N SR+ +L
Sbjct: 467 PTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGISRSASENLDEL 526

Query: 533 S 535
S
Sbjct: 527 S 527


>sp|P03380|ENV_BLVJ Envelope glycoprotein OS=Bovine leukemia virus
(isolate Japanese BLV-1) GN=env PE=1 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 7.9
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVT 286
CHGI F LTW I G DPL+T
Sbjct: 152 CHGI---FTLTWEIWGYDPLIT 170


>sp|P25507|ENV_BLVB5 Envelope glycoprotein OS=Bovine leukemia virus
(isolate Belgium LB59) GN=env PE=3 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 7.9
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVT 286
CHGI F LTW I G DPL+T
Sbjct: 152 CHGI---FTLTWEIWGYDPLIT 170


tr_hit_id A9TQY4
Definition tr|A9TQY4|A9TQY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 19
Score (bit) 38.5
E-value 0.009
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916906|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_D10.
(552 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TQY4|A9TQY4_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.009
tr|A9RQ10|A9RQ10_PHYPA Predicted protein (Fragment) OS=Physcomit... 38 0.015
tr|A9SHB1|A9SHB1_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.020
tr|B2SAD0|B2SAD0_BRUA1 RelA/SpoT family protein OS=Brucella abor... 36 1.6
tr|B0CKX8|B0CKX8_BRUSI RelA/SpoT family protein OS=Brucella suis... 36 1.6
tr|A9MA27|A9MA27_BRUC2 RelA/SpoT family protein OS=Brucella cani... 36 1.6
tr|A6X295|A6X295_OCHA4 (P)ppGpp synthetase I, SpoT/RelA OS=Ochro... 36 1.6
tr|A5BHF6|A5BHF6_VITVI Putative uncharacterized protein OS=Vitis... 32 1.9
tr|Q9LUS1|Q9LUS1_ARATH Similarity to kinesin protein OS=Arabidop... 32 1.9
tr|Q940B8|Q940B8_ARATH Putative kinesin protein OS=Arabidopsis t... 32 1.9
tr|Q56WU1|Q56WU1_ARATH Kinesin-like protein (Fragment) OS=Arabid... 32 2.0
tr|A7NW25|A7NW25_VITVI Chromosome chr5 scaffold_2, whole genome ... 32 2.3
tr|Q3E6Z7|Q3E6Z7_ARATH Uncharacterized protein At4g15885.1 OS=Ar... 32 2.3
tr|Q11JT2|Q11JT2_MESSB (P)ppGpp synthetase I, SpoT/RelA OS=Mesor... 35 2.7
tr|A3B041|A3B041_ORYSJ Putative uncharacterized protein OS=Oryza... 32 3.1
tr|B8AY67|B8AY67_ORYSI Putative uncharacterized protein OS=Oryza... 32 4.1
tr|B6SXM5|B6SXM5_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1 32 4.1
tr|Q0DKM5|Q0DKM5_ORYSJ Os05g0154700 protein (Fragment) OS=Oryza ... 32 4.2
tr|Q60F22|Q60F22_ORYSJ Putative kinesin OS=Oryza sativa subsp. j... 32 4.4
tr|A0NMC4|A0NMC4_9RHOB GTP pyrophosphokinase OS=Labrenzia aggreg... 34 4.6

>tr|A9TQY4|A9TQY4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_149258 PE=3 SV=1
Length = 813

Score = 38.5 bits (88), Expect(2) = 0.009
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
NLQARLARFQRHLKE EIL
Sbjct: 786 NLQARLARFQRHLKEQEIL 804



Score = 23.5 bits (49), Expect(2) = 0.009
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
+YVLS+KAAGIV
Sbjct: 774 NYVLSRKAAGIV 785


>tr|A9RQ10|A9RQ10_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_21928 PE=3 SV=1
Length = 761

Score = 37.7 bits (86), Expect(2) = 0.015
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
NLQARLARFQRH+KE EIL
Sbjct: 741 NLQARLARFQRHMKEQEIL 759



Score = 23.5 bits (49), Expect(2) = 0.015
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
+YVLS+KAAGIV
Sbjct: 729 NYVLSRKAAGIV 740


>tr|A9SHB1|A9SHB1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_129925 PE=3 SV=1
Length = 786

Score = 38.5 bits (88), Expect(2) = 0.020
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
NLQARLARFQRHLKE EIL
Sbjct: 759 NLQARLARFQRHLKEQEIL 777



Score = 22.3 bits (46), Expect(2) = 0.020
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
+YVLS+KA+GIV
Sbjct: 747 NYVLSRKASGIV 758


>tr|B2SAD0|B2SAD0_BRUA1 RelA/SpoT family protein OS=Brucella abortus
(strain S19) GN=BAbS19_I06290 PE=4 SV=1
Length = 720

Score = 35.8 bits (81), Expect = 1.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 276 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 335

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 336 TIEQLSEGDNP 346


>tr|B0CKX8|B0CKX8_BRUSI RelA/SpoT family protein OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=BSUIS_A0680 PE=4
SV=1
Length = 750

Score = 35.8 bits (81), Expect = 1.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|A9MA27|A9MA27_BRUC2 RelA/SpoT family protein OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=BCAN_A0665 PE=4 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 1.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|A6X295|A6X295_OCHA4 (P)ppGpp synthetase I, SpoT/RelA
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=Oant_2636 PE=3 SV=1
Length = 748

Score = 35.8 bits (81), Expect = 1.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKMSTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|A5BHF6|A5BHF6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_000297 PE=3 SV=1
Length = 989

Score = 31.6 bits (70), Expect(2) = 1.9
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
+LQARLARFQ LKE EIL
Sbjct: 964 SLQARLARFQHRLKEQEIL 982



Score = 22.3 bits (46), Expect(2) = 1.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
S+VLS+KAAG+V
Sbjct: 952 SFVLSRKAAGLV 963


>tr|Q9LUS1|Q9LUS1_ARATH Similarity to kinesin protein OS=Arabidopsis
thaliana PE=3 SV=1
Length = 799

Score = 31.6 bits (70), Expect(2) = 1.9
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
+LQARLARFQ LKE EIL
Sbjct: 774 SLQARLARFQHRLKEQEIL 792



Score = 22.3 bits (46), Expect(2) = 1.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
S+VLS+KAAG+V
Sbjct: 762 SFVLSRKAAGLV 773


>tr|Q940B8|Q940B8_ARATH Putative kinesin protein OS=Arabidopsis
thaliana GN=At3g16630 PE=2 SV=1
Length = 794

Score = 31.6 bits (70), Expect(2) = 1.9
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -1

Query: 516 NLQARLARFQRHLKEHEIL 460
+LQARLARFQ LKE EIL
Sbjct: 769 SLQARLARFQHRLKEQEIL 787



Score = 22.3 bits (46), Expect(2) = 1.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2

Query: 551 SYVLSKKAAGIV 516
S+VLS+KAAG+V
Sbjct: 757 SFVLSRKAAGLV 768