| BP916924 |
| Clone id |
YMU001_000093_F05 |
| Library |
YMU01 |
| Length |
610 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_F05. |
| Accession |
BP916924 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GTGTTGTCGAGCGACGGTCGAGGAGTATGGAGCATTATGTAAGGCAGACGCCGCGGTGCG AATCAATATGCAAGCCAGGACGATTCTTGCCAGGCTTGCTCGACATCACAAACAATCGCC CATATTATCTGCAAGCAGAATTGTCTCCTCGTCCTGGGCATACGTTCGTCAAAGCCCATT TGCGGAGGGGCCTTCAGATCACACCATTTTCCATTATTCGAGCAAAGCAGTGAAGGGGCG GGAGACAGAGATAGTTGTCAAACAACCCGCTATTTCTGTTGAAGATGCTGCTAAGGCCAA AGGAGTTGAAATTTCAACAAGGCCCCGTGAGATGACAGCAGACTCATGTAGAACAGGTGC CATTGCCATCAAATGTGGCATGACGGCAGGGTGGGACAAGTGGGGGGCACGTGTTCCCTA CACTGTTCTCTGGTTTGATCACAATGTTGTCACACAAGTGAAAGTTGAAGGAAAGGATTG CACCACTGCGCTCCAGGTGGGGTGTGGGCTAAAGAAAGCCAAGCAACTAACCAAGCCTGA GGTTGGCCACTTCATCAAGCAAGGAGTCCCTCTCAAGCGCAAGCTGACTGAGTTCCAGTC ACAGATGATG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9LRN8 |
| Definition |
sp|Q9LRN8|RK3B_ARATH 50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis thaliana |
| Align length |
95 |
| Score (bit) |
120.0 |
| E-value |
5.0e-27 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7NVZ2 |
| Definition |
tr|A7NVZ2|A7NVZ2_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
95 |
| Score (bit) |
135.0 |
| E-value |
2.0e-30 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916924|Adiantum capillus-veneris mRNA, clone: YMU001_000093_F05. (610 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NVZ2|A7NVZ2_VITVI Chromosome chr5 scaffold_2, whole genome ... 135 2e-30 tr|A9PFR0|A9PFR0_POPTR Putative uncharacterized protein OS=Popul... 133 9e-30 tr|A5BYZ8|A5BYZ8_VITVI Putative uncharacterized protein OS=Vitis... 132 1e-29 tr|Q9LIT4|Q9LIT4_ORYSJ cDNA clone:J033064P19, full insert sequen... 123 7e-27 tr|B8ABS3|B8ABS3_ORYSI Putative uncharacterized protein OS=Oryza... 123 7e-27 tr|A2ZRB6|A2ZRB6_ORYSJ Putative uncharacterized protein OS=Oryza... 123 7e-27 tr|B6TFD9|B6TFD9_MAIZE 50S ribosomal protein L3-2 OS=Zea mays PE... 123 1e-26 tr|B4FAB5|B4FAB5_MAIZE Putative uncharacterized protein OS=Zea m... 121 3e-26 tr|A9S5J3|A9S5J3_PHYPA Predicted protein OS=Physcomitrella paten... 115 2e-24 tr|Q00RY2|Q00RY2_OSTTA Putative ribosomal protein L3 (ISS) OS=Os... 85 4e-15 tr|Q22HG3|Q22HG3_TETTH Ribosomal protein L3 containing protein (... 85 4e-15 tr|A4SAF0|A4SAF0_OSTLU Putative mitochondrial ribosomal protein ... 84 8e-15 tr|A0DEC4|A0DEC4_PARTE Chromosome undetermined scaffold_48, whol... 82 2e-14 tr|A0D1W5|A0D1W5_PARTE Chromosome undetermined scaffold_34, whol... 82 2e-14 tr|A8HPX6|A8HPX6_CHLRE Mitochondrial ribosomal protein L3 OS=Chl... 80 1e-13 tr|B8H4D4|B8H4D4_CAUCR LSU ribosomal protein L3P OS=Caulobacter ... 74 9e-12 tr|A8TZL6|A8TZL6_9PROT 50S ribosomal protein L3 OS=alpha proteob... 74 9e-12 tr|B0QSJ0|B0QSJ0_HAEPR 50S ribosomal protein L3 OS=Haemophilus p... 72 3e-11 tr|A4NXB2|A4NXB2_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4NPH3|A4NPH3_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4NK71|A4NK71_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4NF48|A4NF48_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4N7H9|A4N7H9_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4N316|A4N316_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|A4MWU9|A4MWU9_HAEIN 50S ribosomal protein L3 OS=Haemophilus i... 72 3e-11 tr|B8F755|B8F755_HAEPR 50S ribosomal protein L3 OS=Haemophilus p... 72 3e-11 tr|B8C6P6|B8C6P6_THAPS Predicted protein (Fragment) OS=Thalassio... 72 3e-11 tr|B8GV58|B8GV58_9GAMM Ribosomal protein L3 OS=Thioalkalivibrio ... 70 7e-11 tr|B3GZ11|B3GZ11_ACTP7 50S ribosomal protein L3 OS=Actinobacillu... 70 1e-10 tr|B0BST1|B0BST1_ACTPJ Ribosomal protein L3 OS=Actinobacillus pl... 70 1e-10
>tr|A7NVZ2|A7NVZ2_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019720001 PE=3 SV=1 Length = 307
Score = 135 bits (339), Expect = 2e-30 Identities = 66/95 (69%), Positives = 74/95 (77%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I +P M+ +S RTGAIA+KCGM+A WDKWGARVP TVLW D N+V+QVK K+ A Sbjct: 46 IVPKPGVMSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNA 105
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQVGCG KKAK LTKPEVGHF QGVPLKRKL EF Sbjct: 106 LQVGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREF 140
>tr|A9PFR0|A9PFR0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 315
Score = 133 bits (334), Expect = 9e-30 Identities = 63/95 (66%), Positives = 72/95 (75%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I +P MT +S RTG +A+KCGMTA WDKWGAR+P TVLW D N+V+QVK K+ A Sbjct: 56 IEAKPGVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFA 115
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQVGCG KK K LTKPEVGHF QGVP+KRKL EF Sbjct: 116 LQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREF 150
>tr|A5BYZ8|A5BYZ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033846 PE=3 SV=1 Length = 243
Score = 132 bits (333), Expect = 1e-29 Identities = 64/88 (72%), Positives = 71/88 (80%) Frame = +2
Query: 332 MTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTALQVGCGL 511 M+ +S RTGAIA+KCGM+A WDKWGARVP TVLW D N+V+QVK K+ ALQVGCG Sbjct: 1 MSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQ 60
Query: 512 KKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 KKAK LTKPEVGHF QGVPLKRKL EF Sbjct: 61 KKAKHLTKPEVGHFRAQGVPLKRKLREF 88
>tr|Q9LIT4|Q9LIT4_ORYSJ cDNA clone:J033064P19, full insert sequence OS=Oryza sativa subsp. japonica GN=P0434D08.21 PE=2 SV=1 Length = 319
Score = 123 bits (309), Expect = 7e-27 Identities = 62/95 (65%), Positives = 67/95 (70%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I R M DS RTG I +KCGM+A WDKWGA+VP TVLW D NVV QVK K+ A Sbjct: 61 IEARAGVMGPDSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFA 120
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQ+G G KK K LTKPEVGHF QGVPLKRKL EF Sbjct: 121 LQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREF 155
>tr|B8ABS3|B8ABS3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01192 PE=4 SV=1 Length = 319
Score = 123 bits (309), Expect = 7e-27 Identities = 62/95 (65%), Positives = 67/95 (70%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I R M DS RTG I +KCGM+A WDKWGA+VP TVLW D NVV QVK K+ A Sbjct: 61 IEARAGVMGPDSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFA 120
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQ+G G KK K LTKPEVGHF QGVPLKRKL EF Sbjct: 121 LQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREF 155
>tr|A2ZRB6|A2ZRB6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001088 PE=3 SV=1 Length = 322
Score = 123 bits (309), Expect = 7e-27 Identities = 62/95 (65%), Positives = 67/95 (70%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I R M DS RTG I +KCGM+A WDKWGA+VP TVLW D NVV QVK K+ A Sbjct: 61 IEARAGVMGPDSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFA 120
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQ+G G KK K LTKPEVGHF QGVPLKRKL EF Sbjct: 121 LQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREF 155
>tr|B6TFD9|B6TFD9_MAIZE 50S ribosomal protein L3-2 OS=Zea mays PE=2 SV=1 Length = 318
Score = 123 bits (308), Expect = 1e-26 Identities = 62/95 (65%), Positives = 67/95 (70%) Frame = +2
Query: 311 ISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTA 490 I R M S RTG I +KCGM+A WDKWGA+VP TVLW D NVVTQVK K+ A Sbjct: 58 IEARSGVMGPTSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFA 117
Query: 491 LQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 LQ+G G KK K LTKPEVGHF QGVPLKRKL EF Sbjct: 118 LQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREF 152
>tr|B4FAB5|B4FAB5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 254
Score = 121 bits (304), Expect = 3e-26 Identities = 60/88 (68%), Positives = 65/88 (73%) Frame = +2
Query: 332 MTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTALQVGCGL 511 M S RTG I +KCGM+A WDKWGA+VP TVLW D NVVTQVK K+ ALQ+G G Sbjct: 1 MGPTSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQ 60
Query: 512 KKAKQLTKPEVGHFIKQGVPLKRKLTEF 595 KK K LTKPEVGHF QGVPLKRKL EF Sbjct: 61 KKEKHLTKPEVGHFRAQGVPLKRKLREF 88
>tr|A9S5J3|A9S5J3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124350 PE=3 SV=1 Length = 258
Score = 115 bits (289), Expect = 2e-24 Identities = 56/85 (65%), Positives = 63/85 (74%) Frame = +2
Query: 341 DSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDHNVVTQVKVEGKDCTTALQVGCGLKKA 520 +S RTG IA+KCGMTA WDKWGARVP TVLW + N V QVK E D ALQ+G G +K Sbjct: 11 ESFRTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKP 70
Query: 521 KQLTKPEVGHFIKQGVPLKRKLTEF 595 KQLTKPE+GHF GVPLK+ L EF Sbjct: 71 KQLTKPELGHFRAAGVPLKQHLAEF 95
>tr|Q00RY2|Q00RY2_OSTTA Putative ribosomal protein L3 (ISS) OS=Ostreococcus tauri GN=Ot20g00340 PE=3 SV=1 Length = 312
Score = 84.7 bits (208), Expect = 4e-15 Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Frame = +2
Query: 275 SVEDAAKAKGVEISTRPREMTADSCRTGAIAIKCGMTAGWDKWGARVPYTVLWFDH-NVV 451 ++ AK ST PR RTGAI IKCGMTA WD G R TV+W D VV Sbjct: 43 AIHRVVDAKTSSSSTAPR-------RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVV 95
Query: 452 TQVKVEGKDCTTALQVGCGLKKAKQLTKPEVGHFIKQGVPLKRKLTEFQ 598 + +G + A+Q+G G +KAK +TK E+GHF++ G +KR L EF+ Sbjct: 96 RRTGRDGANGYDAVQIGYGARKAKGVTKAELGHFVRHGSGIKRGLKEFR 144
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