| BP916926 |
| Clone id |
YMU001_000093_F07 |
| Library |
YMU01 |
| Length |
368 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_F07. |
| Accession |
BP916926 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL812Contig1 |
| Sequence |
TCCTATGAGTTGCTCCTCCTGACTGTGTTAGTCTCTCCTGCAGCAACAATTCCCCTCGCA TGGTTTCACAGCCTCCCTTTGAGCTGACTTCAATGCACTTCTCGCTACTCTCCTTTGCCA AAGGGGGATCGACCAAAACCTTTTTGAGGGCCACAGTTTCATCACCTGCAAAAGAGGATA CTTCACAGTTCTGTTCATCAACATTCAGCACAGTTACATTTTGTTTCTGCATTTCCTTAG GATCTGCATCGACAGTTCGTAATTGAGTTGGCGCATGCTCTTCTAGCAGGTGATAGCTCT CTCCTCCCTTTAAATGGTTACATGTTTCTGTCGGGTTCTCCAAAGAAACTGCAATTTCTT CAGCTTTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P07825 |
| Definition |
sp|P07825|SYPH_RAT Synaptophysin OS=Rattus norvegicus |
| Align length |
82 |
| Score (bit) |
34.7 |
| E-value |
0.15 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q23682 |
| Definition |
tr|Q23682|Q23682_CAEEL Guanylate cyclase OS=Caenorhabditis elegans |
| Align length |
89 |
| Score (bit) |
38.1 |
| E-value |
0.22 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916926|Adiantum capillus-veneris mRNA, clone: YMU001_000093_F07. (368 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q23682|Q23682_CAEEL Guanylate cyclase OS=Caenorhabditis elega... 38 0.22 tr|A8WPH0|A8WPH0_CAEBR Guanylate cyclase OS=Caenorhabditis brigg... 38 0.22 tr|Q9K1N0|Q9K1N0_NEIMB DnaK suppressor protein OS=Neisseria meni... 37 0.49 tr|A9LZV4|A9LZV4_NEIM0 DnaK suppressor protein OS=Neisseria meni... 37 0.49 tr|A1KR88|A1KR88_NEIMF Putative DnaK suppressor protein OS=Neiss... 37 0.49 tr|A1IP66|A1IP66_NEIMA Putative DnaK suppressor protein OS=Neiss... 37 0.49 tr|B0VQ13|B0VQ13_ACIBS 16S rRNA m5C967 SAM-dependent methyltrans... 36 1.1 tr|B0VAD9|B0VAD9_ACIBY 16S rRNA m5C967 SAM-dependent methyltrans... 36 1.1 tr|A3MAA2|A3MAA2_ACIBT 16S rRNA m5C967 SAM-dependent methyltrans... 36 1.1 tr|B7I2C4|B7I2C4_ACIBA Ribosomal RNA small subunit methyltransfe... 36 1.1 tr|B7GUZ6|B7GUZ6_ACIBA Ribosomal RNA small subunit methyltransfe... 36 1.1 tr|Q5F5L9|Q5F5L9_NEIG1 Putative dosage-dependent DnaK suppressor... 35 1.4 tr|B4RPT0|B4RPT0_NEIG2 DskA OS=Neisseria gonorrhoeae (strain NCC... 35 1.4 tr|Q9LHT8|Q9LHT8_ARATH Gb|AAD20426.1 OS=Arabidopsis thaliana GN=... 35 1.4 tr|B2I2H8|B2I2H8_ACIBC tRNA and rRNA cytosine-C5-methylase OS=Ac... 35 1.9 tr|Q5F3F6|Q5F3F6_CHICK Putative uncharacterized protein OS=Gallu... 35 2.4 tr|Q4QXL0|Q4QXL0_OXYSC Golgi-associated protein (Fragment) OS=Ox... 35 2.4 tr|B1AVA8|B1AVA8_MOUSE Synaptophysin (Fragment) OS=Mus musculus ... 35 2.4 tr|B1AVA7|B1AVA7_MOUSE Synaptophysin OS=Mus musculus GN=Syp PE=4... 35 2.4 tr|A4FUR8|A4FUR8_MOUSE Syp protein (Fragment) OS=Mus musculus GN... 35 2.4 tr|B0EUW6|B0EUW6_ENTDI Ras guanine nucleotide exchange factor, s... 35 2.4 tr|Q9FYW6|Q9FYW6_SOLLC BAC19.10 OS=Solanum lycopersicum PE=4 SV=1 33 5.4 tr|Q5U4E7|Q5U4E7_RAT Arhgap11a protein (Fragment) OS=Rattus norv... 33 7.1 tr|A9DJP9|A9DJP9_9FLAO Putative transcriptional regulator OS=Kor... 33 7.1 tr|Q9LP30|Q9LP30_ARATH T9L6.4 protein OS=Arabidopsis thaliana GN... 33 7.1 tr|Q9RX24|Q9RX24_DEIRA Putative uncharacterized protein OS=Deino... 33 9.3 tr|Q6F6P8|Q6F6P8_ACIAD 16S rRNA m5C967 SAM-dependent methyltrans... 33 9.3 tr|Q7QG95|Q7QG95_ANOGA AGAP010623-PA (Fragment) OS=Anopheles gam... 33 9.3
>tr|Q23682|Q23682_CAEEL Guanylate cyclase OS=Caenorhabditis elegans GN=gcy-5 PE=2 SV=1 Length = 1122
Score = 38.1 bits (87), Expect = 0.22 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = -2
Query: 289 LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCEVSSFA-GDETVALKKVLVDPPLAK 113 LLEEH P++ R + A P E+ + ++T+ +D + +V SFA + K+ D K Sbjct: 699 LLEEHTPSKKRLLWAAP-EVLRGSLTIHQMD-PSADVYSFAIIASEILTKREAWDISNRK 756
Query: 112 ESSEKCIEVSSKGGCETMRGELLLQERLT 26 E +++ + + KGG T+R EL+L ++ Sbjct: 757 EGADEILYMVKKGGNRTIRPELILDAEVS 785
>tr|A8WPH0|A8WPH0_CAEBR Guanylate cyclase OS=Caenorhabditis briggsae GN=Cbr-gcy-5 PE=3 SV=2 Length = 1242
Score = 38.1 bits (87), Expect = 0.22 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%) Frame = -2
Query: 289 LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCEVSSFA-GDETVALKKVLVDPPLAK 113 LLEEH PT+ R + A P E+ + ++TV +D + +V SFA + K+ D K Sbjct: 818 LLEEHTPTKRRLLWAAP-EVLRGSLTVSQMD-PSADVYSFAIVASEILTKREAWDFANRK 875
Query: 112 ESSEKCIEVSSKGGCETMRGELLLQERLTQS 20 E +++ + + KGG +R EL+ ++ S Sbjct: 876 EGADEILYMIKKGGARAVRPELIPDAEVSPS 906
>tr|Q9K1N0|Q9K1N0_NEIMB DnaK suppressor protein OS=Neisseria meningitidis serogroup B GN=dksA PE=4 SV=1 Length = 138
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%) Frame = -2
Query: 343 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCE 182 +EN + T HL+ ES EE +LRT D + K + K T+ N+DE + Sbjct: 40 IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99
Query: 181 VSSFAGDETVALKKVLVDP--PLAKESSEK 98 + G E + LK++L P L+ ES E+ Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128
>tr|A9LZV4|A9LZV4_NEIM0 DnaK suppressor protein OS=Neisseria meningitidis serogroup C (strain 053442) GN=dksA PE=4 SV=1 Length = 138
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%) Frame = -2
Query: 343 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCE 182 +EN + T HL+ ES EE +LRT D + K + K T+ N+DE + Sbjct: 40 IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99
Query: 181 VSSFAGDETVALKKVLVDP--PLAKESSEK 98 + G E + LK++L P L+ ES E+ Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128
>tr|A1KR88|A1KR88_NEIMF Putative DnaK suppressor protein OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dksA PE=4 SV=1 Length = 138
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%) Frame = -2
Query: 343 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCE 182 +EN + T HL+ ES EE +LRT D + K + K T+ N+DE + Sbjct: 40 IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99
Query: 181 VSSFAGDETVALKKVLVDP--PLAKESSEK 98 + G E + LK++L P L+ ES E+ Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128
>tr|A1IP66|A1IP66_NEIMA Putative DnaK suppressor protein OS=Neisseria meningitidis serogroup A GN=NMA0213 PE=4 SV=1 Length = 138
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%) Frame = -2
Query: 343 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNVTVLNVDEQNCE 182 +EN + T HL+ ES EE +LRT D + K + K T+ N+DE + Sbjct: 40 IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99
Query: 181 VSSFAGDETVALKKVLVDP--PLAKESSEK 98 + G E + LK++L P L+ ES E+ Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128
>tr|B0VQ13|B0VQ13_ACIBS 16S rRNA m5C967 SAM-dependent methyltransferase OS=Acinetobacter baumannii (strain SDF) GN=sun PE=4 SV=1 Length = 434
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -2
Query: 307 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNVTVLNVDEQNCEVSSFAGDET 155 GG++ HLLE+ P QL +D DP + + +N+ L +D+ + E+ A D T Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308
>tr|B0VAD9|B0VAD9_ACIBY 16S rRNA m5C967 SAM-dependent methyltransferase OS=Acinetobacter baumannii (strain AYE) GN=sun PE=4 SV=1 Length = 434
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -2
Query: 307 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNVTVLNVDEQNCEVSSFAGDET 155 GG++ HLLE+ P QL +D DP + + +N+ L +D+ + E+ A D T Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308
>tr|A3MAA2|A3MAA2_ACIBT 16S rRNA m5C967 SAM-dependent methyltransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=A1S_3457 PE=4 SV=2 Length = 434
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -2
Query: 307 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNVTVLNVDEQNCEVSSFAGDET 155 GG++ HLLE+ P QL +D DP + + +N+ L +D+ + E+ A D T Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308
>tr|B7I2C4|B7I2C4_ACIBA Ribosomal RNA small subunit methyltransferase B OS=Acinetobacter baumannii AB0057 GN=sun PE=4 SV=1 Length = 434
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -2
Query: 307 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNVTVLNVDEQNCEVSSFAGDET 155 GG++ HLLE+ P QL +D DP + + +N+ L +D+ + E+ A D T Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308
|