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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916932
Clone id YMU001_000093_G02
Library
Length 323
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAGTGTAATATGCAAATCACATCACAAAATCCATTTTGCATTTTTTGCTCCCTGCTGTGC
CTAGTCCTATTTGACAGGCCTAGGAGAACCCAACTCCCTGTTTCTTTGCTTAACTAGAGA
AGCCTCCTCTCTAAATATCCCACATTGCTCGGTGAATCTGCATTTACTGCTTATCCAACC
CCCATGGGTCCTCTTCATTTCAAGCTTTCTACGCAAAATGTACCTTTGCCATACAGCTTT
TTCATCTGCGGGTAAATTGCTCTGTTCTGTTTCTCTTCTTCGTCCAGCACATGAGCCACC
ATCACCAGCAGCACTAAAGATCT
■■Homology search results ■■ -
sp_hit_id A4Z945
Definition sp|A4Z945|YE037_BOVIN Transposon-derived Buster3 transposase-like protein OS=Bos taurus
Align length 50
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916932|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G02.
         (323 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4Z945|YE037_BOVIN Transposon-derived Buster3 transposase-lik...    31   1.7  
sp|P36428|SYA_ARATH Alanyl-tRNA synthetase, mitochondrial OS=Ara...    30   2.8  
sp|Q0D2E8|RFT1_XENTR Protein RFT1 homolog OS=Xenopus tropicalis ...    29   6.3  
sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens ...    29   6.3  
sp|Q5UPT2|UNG_MIMIV Probable uracil-DNA glycosylase OS=Acanthamo...    29   8.2  

>sp|A4Z945|YE037_BOVIN Transposon-derived Buster3 transposase-like
           protein OS=Bos taurus PE=2 SV=1
          Length = 594

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 23  HKIHFAFFAPCCA*SYLTGLGEPNSLFLCLTREASSLNIPHCSVNLHLLL 172
           HKI        C     + LGE +    C+ +E   + I HC VN H L+
Sbjct: 230 HKIALDVCGSVCTDGASSMLGENSEFVCCVKKEVPHIVITHCLVNPHTLV 279


>sp|P36428|SYA_ARATH Alanyl-tRNA synthetase, mitochondrial
           OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
          Length = 1003

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 176 QPPWVLFISSFLRKMYLCHTAFSSAGKLLCSVSLLRPAHEP 298
           +PP  +F SS LR+ +  H  FSS+     SV+++ P  EP
Sbjct: 15  KPPSRVFYSSHLRRPFFSHFRFSSSSSTSSSVAVM-PGSEP 54


>sp|Q0D2E8|RFT1_XENTR Protein RFT1 homolog OS=Xenopus tropicalis
           GN=rft1 PE=2 SV=1
          Length = 539

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = +2

Query: 98  LFLCLTREASSLNIP-HCSVNLHLLLIQPPWVLFISSFLRKMY-----LCHTAF 241
           LF+ L   A SL I   CSV + L+L+ P W L I S  + +Y     LC+ A+
Sbjct: 147 LFVKLKVVAESLAIIIRCSVTVILVLLCPQWGLLIFSLAQVLYTSALALCYIAY 200


>sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens
           GN=FRYL PE=1 SV=2
          Length = 3013

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +2

Query: 143 HCSVNLHLLLIQPPWVLFISSFLRKMYL---CHTAFSSAGKLLCS-VSLLRPAHEPPSPA 310
           H  +  H+   Q PW++ +SSFL++  L   C TA S A     + + LL P  +  SP 
Sbjct: 787 HIWIFAHVTQGQDPWIISLSSFLKQENLPKHCSTAVSYAWMFAYTRLQLLSPQVDINSPI 846

Query: 311 ALK 319
             K
Sbjct: 847 NAK 849


>sp|Q5UPT2|UNG_MIMIV Probable uracil-DNA glycosylase OS=Acanthamoeba
           polyphaga mimivirus GN=UNG PE=3 SV=1
          Length = 370

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 140 PHCSVNLHLLLIQPPWVLFISSFLRKMY 223
           P C VNL LLL +P W  F      K Y
Sbjct: 119 PDCKVNLKLLLFRPEWFDFFKYVESKTY 146
tr_hit_id Q9LXS4
Definition tr|Q9LXS4|Q9LXS4_ARATH Putative uncharacterized protein T20N10_120 OS=Arabidopsis thaliana
Align length 86
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916932|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G02.
         (323 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LXS4|Q9LXS4_ARATH Putative uncharacterized protein T20N10_1...    35   2.4  
tr|Q5Q0C2|Q5Q0C2_ARATH Putative uncharacterized protein OS=Arabi...    35   2.4  
tr|Q7XK39|Q7XK39_ORYSJ OSJNBa0044K18.6 protein OS=Oryza sativa s...    33   5.4  
tr|Q0JCD8|Q0JCD8_ORYSJ Os04g0477200 protein (Fragment) OS=Oryza ...    33   5.4  
tr|Q01JY3|Q01JY3_ORYSA OSIGBa0116M22.5 protein OS=Oryza sativa G...    33   5.4  
tr|A3AUV1|A3AUV1_ORYSJ Putative uncharacterized protein OS=Oryza...    33   5.4  
tr|Q0CWF6|Q0CWF6_ASPTN Predicted protein OS=Aspergillus terreus ...    33   7.0  

>tr|Q9LXS4|Q9LXS4_ARATH Putative uncharacterized protein T20N10_120
           OS=Arabidopsis thaliana GN=T20N10_120 PE=4 SV=1
          Length = 771

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1   KCNMQITSQNPFCIFCSLLCLVLFDRPRR-----TQLPVSLLN*RSLLSKYPTLLGESAF 165
           K  ++ TS++PF +FC  L + L  + R      ++ P ++LN    L+ +P  L E   
Sbjct: 579 KALLRDTSKDPFPLFCEPL-VSLASQSRAYAVPDSEFPSTILNPCCSLASFP--LSEKNL 635

Query: 166 TAYPTPMGPLH-FKLSTQNVPLPYSF 240
             + + +GP + F LS Q +P PY +
Sbjct: 636 NFHGSGLGPPNSFTLSQQQLPFPYDY 661


>tr|Q5Q0C2|Q5Q0C2_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana GN=AT3G58770 PE=2 SV=1
          Length = 771

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1   KCNMQITSQNPFCIFCSLLCLVLFDRPRR-----TQLPVSLLN*RSLLSKYPTLLGESAF 165
           K  ++ TS++PF +FC  L + L  + R      ++ P ++LN    L+ +P  L E   
Sbjct: 579 KALLRDTSKDPFPLFCEPL-VSLASQSRAYAVPDSEFPSTILNPCCSLASFP--LSEKNL 635

Query: 166 TAYPTPMGPLH-FKLSTQNVPLPYSF 240
             + + +GP + F LS Q +P PY +
Sbjct: 636 NFHGSGLGPPNSFTLSQQQLPFPYDY 661


>tr|Q7XK39|Q7XK39_ORYSJ OSJNBa0044K18.6 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0044K18.6 PE=4 SV=2
          Length = 902

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
 Frame = +2

Query: 89  PNSLFLCLTREASSLNIPHCSVNLHLLLIQ----PPWVLFISSFLRKMYLCHTAFS---- 244
           P++  L L     SL++P  + +LH LL      P + LF   F  ++ LC T F+    
Sbjct: 437 PHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLR 496

Query: 245 ---SAGKLLCSVSLLRPAHEP 298
              SAGK   ++ LLR    P
Sbjct: 497 HLCSAGKPARALELLRQMPRP 517


>tr|Q0JCD8|Q0JCD8_ORYSJ Os04g0477200 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os04g0477200 PE=4 SV=1
          Length = 528

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
 Frame = +2

Query: 89  PNSLFLCLTREASSLNIPHCSVNLHLLLIQ----PPWVLFISSFLRKMYLCHTAFS---- 244
           P++  L L     SL++P  + +LH LL      P + LF   F  ++ LC T F+    
Sbjct: 63  PHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLR 122

Query: 245 ---SAGKLLCSVSLLRPAHEP 298
              SAGK   ++ LLR    P
Sbjct: 123 HLCSAGKPARALELLRQMPRP 143


>tr|Q01JY3|Q01JY3_ORYSA OSIGBa0116M22.5 protein OS=Oryza sativa
           GN=OSIGBa0116M22.5 PE=4 SV=1
          Length = 568

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
 Frame = +2

Query: 89  PNSLFLCLTREASSLNIPHCSVNLHLLLIQ----PPWVLFISSFLRKMYLCHTAFS---- 244
           P++  L L     SL++P  + +LH LL      P + LF   F  ++ LC T F+    
Sbjct: 103 PHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLR 162

Query: 245 ---SAGKLLCSVSLLRPAHEP 298
              SAGK   ++ LLR    P
Sbjct: 163 HLCSAGKPARALELLRQMPRP 183


>tr|A3AUV1|A3AUV1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_014573 PE=4 SV=1
          Length = 903

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
 Frame = +2

Query: 89  PNSLFLCLTREASSLNIPHCSVNLHLLLIQ----PPWVLFISSFLRKMYLCHTAFS---- 244
           P++  L L     SL++P  + +LH LL      P + LF   F  ++ LC T F+    
Sbjct: 438 PHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLR 497

Query: 245 ---SAGKLLCSVSLLRPAHEP 298
              SAGK   ++ LLR    P
Sbjct: 498 HLCSAGKPARALELLRQMPRP 518


>tr|Q0CWF6|Q0CWF6_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_01978 PE=3 SV=1
          Length = 229

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 26/82 (31%), Positives = 36/82 (43%)
 Frame = -3

Query: 315 SAAGDGGSCAGRRRETEQSNLPADEKAVWQRYILRRKLEMKRTHGGWISSKCRFTEQCGI 136
           SA G  GS  GRRR+ E ++  ADE+   +R  L R            +SKCR  ++   
Sbjct: 54  SANGATGSSGGRRRKIEDTDGGADEETAKRRRFLER--------NRLAASKCRQKKKMEA 105

Query: 135 FREEASLVKQRNRELGSPRPVK 70
              E    K+  R L   R V+
Sbjct: 106 QMLEQKCEKETKRRLSLNRQVR 127