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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916937
Clone id YMU001_000093_G07
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCACCAAGATAGAGTATGGGTGCCTGACACACAGATACCGCTGTCGCTGTTGAGGGACTT
TGAAGAAAAGCTCTGGCTAAGGCAGAAGAAAAAAGACTGCAGTGAAACTGTAGGGAGTTC
TTGGCTCAGGGATTGCAAGCGTTTAAGGAAAGGTTTGGTTCTGGATCGCAAATCAAGGTC
AGCTGTGGTTTGTTTGGAGCAATCAACAGGAATGGGCAATGGGCATGCTCACAAAGCAAT
AAGATACATGTCTGCATCACCGTTAATCATGGCAAATCGCAGTAATGATGAGGCTCCTTG
AGGACAGTCACATGTAAGCCTTCCTTGAGCAAAAAGCAATGCAGCATGAAGTTTTGTCTG
TGGAACATGAGAGGAACTAGACGCGTTCCTGGATCTCGGTCAGCTGCACATAATGGACTT
GGCAGTTTTATAGAAGAGAAATTGAATGGGTAAGTCTGACAATACTCCTATCTG
■■Homology search results ■■ -
sp_hit_id Q89AM2
Definition sp|Q89AM2|MLTE_BUCBP Membrane-bound lytic murein transglycosylase E OS=Buchnera aphidicola subsp. Baizongia pistaciae
Align length 62
Score (bit) 30.8
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916937|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G07.
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q89AM2|MLTE_BUCBP Membrane-bound lytic murein transglycosylas...    31   3.2  
sp|Q8G6E0|UVRC_BIFLO UvrABC system protein C OS=Bifidobacterium ...    30   4.2  
sp|Q83AC2|KSGA_COXBU Dimethyladenosine transferase OS=Coxiella b...    30   5.4  
sp|Q758T8|SWC3_ASHGO SWR1-complex protein 3 OS=Ashbya gossypii G...    29   9.3  
sp|Q3UZD7|F71F1_MOUSE Protein FAM71F1 OS=Mus musculus GN=Fam71f1...    29   9.3  

>sp|Q89AM2|MLTE_BUCBP Membrane-bound lytic murein transglycosylase E
           OS=Buchnera aphidicola subsp. Baizongia pistaciae
           GN=mltE PE=3 SV=1
          Length = 212

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +2

Query: 86  KKKDCSETVGSSWLRDCKRLRKGLVLDRKSRSAVVCLEQSTGMGNGHA---HKAIRYMSA 256
           K   CS  V   W +      K   +D+K  +A++C+E S   GN HA    KAI  M  
Sbjct: 36  KNNVCSMKVMHLWFKIINLFSKKYNVDKKLITAIICVESS---GNTHAVSISKAIGLMQI 92

Query: 257 SP 262
            P
Sbjct: 93  KP 94


>sp|Q8G6E0|UVRC_BIFLO UvrABC system protein C OS=Bifidobacterium
           longum GN=uvrC PE=3 SV=2
          Length = 746

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/83 (27%), Positives = 42/83 (50%)
 Frame = +2

Query: 8   DRVWVPDTQIPLSLLRDFEEKLWLRQKKKDCSETVGSSWLRDCKRLRKGLVLDRKSRSAV 187
           + VWVPD   P+ L R   E ++L Q+ +D S     ++ R  ++ RKG +     RSA 
Sbjct: 642 EEVWVPDDDYPIILKRQ-SEGMYLLQRVRDESHRFAITYHR--QQRRKGAL-----RSA- 692

Query: 188 VCLEQSTGMGNGHAHKAIRYMSA 256
             L++  G+G  +  + + +  +
Sbjct: 693 --LDEIPGIGESYQKRLLNHFGS 713


>sp|Q83AC2|KSGA_COXBU Dimethyladenosine transferase OS=Coxiella
           burnetii GN=ksgA PE=3 SV=2
          Length = 258

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -2

Query: 446 FNFSSIKLPSPLCAADRDPGTRLVPLMFHRQNFMLHCFLLKEGLHVTVLKE 294
           F+FSS+K   PL      P     PL+FH  +  +HC    E +H  + KE
Sbjct: 90  FDFSSVKTDKPLRVVGNLPYNISTPLLFHLFS-QIHCI---EDMHFMLQKE 136


>sp|Q758T8|SWC3_ASHGO SWR1-complex protein 3 OS=Ashbya gossypii
           GN=SWC3 PE=3 SV=1
          Length = 688

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 263 TVMQTCILLLCEHAHCPFLLIAPNKPQLTLICDPEPNLSLNACNP 129
           T +Q C+  + EH +CP +L  P    L+ I      + LN+ NP
Sbjct: 585 TEVQPCLFNVYEHPNCPEVLYTPMTVTLSNIPKKFTPIILNSVNP 629


>sp|Q3UZD7|F71F1_MOUSE Protein FAM71F1 OS=Mus musculus GN=Fam71f1
           PE=2 SV=1
          Length = 341

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 11  RVWVPDTQIPLSLLRDFEEKLWLRQKKKDCSETVGSSWLRDCKRLRKGLVLDRKSRSAVV 190
           ++W  D Q  +  LR   EK++  +   D  ETV   W+R  + L KGL +  K  + +V
Sbjct: 155 QIW--DDQERVLRLRTVTEKIYYLKLHPDHPETVFHFWIRLVQILHKGLSITTKDPTILV 212
tr_hit_id Q7EZR3
Definition tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza sativa subsp. japonica
Align length 49
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916937|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G07.
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Or...    34   3.2  
tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Or...    34   3.2  
tr|A9S747|A9S747_PHYPA Predicted protein OS=Physcomitrella paten...    34   3.2  
tr|B8KU83|B8KU83_9GAMM Putative oxygen-independent coproporphyri...    33   9.3  

>tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza
           sativa subsp. japonica GN=P0582D05.140 PE=3 SV=1
          Length = 120

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 330 AQGRLTCDCPQGASSLLRFAMINGDADMYLIAL*ACPLPIPV----DCS 196
           A+ R  CDC + A++  RF  +NGDA   L A  A PLP P+    DC+
Sbjct: 71  AERRFACDCVKKAAA--RFKGLNGDAIRDLPAKCAAPLPFPLSLDFDCN 117


>tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Oryza
           sativa subsp. indica GN=OsI_27706 PE=3 SV=1
          Length = 169

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 330 AQGRLTCDCPQGASSLLRFAMINGDADMYLIAL*ACPLPIPV----DCS 196
           A+ R  CDC + A++  RF  +NGDA   L A  A PLP P+    DC+
Sbjct: 71  AERRFACDCVKKAAA--RFKGLNGDAIRDLPAKCAAPLPFPLSLDFDCN 117


>tr|A9S747|A9S747_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163204 PE=4 SV=1
          Length = 1111

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = -2

Query: 395 DPGTRLVPLMFHRQNFMLHCFLLKEGLHVTVLKEPHHYCDLP*LTVMQTCILLLCEHAHC 216
           D   RL    F  ++F+ H + +K  L++ VLK+    CD     +  T   L+C+ A  
Sbjct: 95  DLAVRLPKCCFLEKDFLNHRYHVKRALYLAVLKKAITKCD----CISSTKWSLICDDARK 150

Query: 215 PFLLIAP 195
           P LL+ P
Sbjct: 151 PVLLLFP 157


>tr|B8KU83|B8KU83_9GAMM Putative oxygen-independent
           coproporphyrinogen III oxidase OS=gamma proteobacterium
           NOR51-B GN=NOR51B_340 PE=4 SV=1
          Length = 383

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +2

Query: 29  TQIPLSLLRDFEEKLWLRQKKKDCSETVGSSWLRDCKRLRKGLVLDRKSRSAVVCLEQST 208
           T++P   L+  +++   +Q +   S+  G  ++ +  RLR+G   D         L Q T
Sbjct: 286 TRLPRDYLQSIKDQAPPKQTRVAASDLAGE-FMMNALRLRQGFSTD--------LLLQRT 336

Query: 209 GMGNGHAHKAIRYMSASPLIMANRSNDEA 295
           G+G G  ++ +R + +  LI    SN  A
Sbjct: 337 GLGTGSVNETLRSLESKGLIAIGDSNISA 365