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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916938
Clone id YMU001_000093_G08
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGAATTCGCGGCCGCAGGAATGTGATTATTTGTTTTGCAAGAACAAACCCACG
TCTCTATTATTGACCCATCTGTCACTATATAACAAAAGCAAATGAAACCACTAATGCAAT
GCACACAACCATCCCATCTTAGCTGAAAAATGAAGCCAGCATATAAGCTTTGGATCTGAC
TGCACCATACATCACAACCCTTTCACTGTAAAAACGAAACCATCATCAAAGATGTGCACA
CCTTGATACAGACGTGTAGATCAAGCATACGAGGCCAGTGATTGAAGGCTTTACTCTTGC
AATGCCCACTCCACAAGTGTTAGGGTGCTGATTGGCAGACTACTCGATAGGTCTCGTCAT
TGCAGGTCTTCCCATTTATCATGCTAGAAACAGTCATACACCCTAGCATAGCCATGCTGT
TAATC
■■Homology search results ■■ -
sp_hit_id A8GPK1
Definition sp|A8GPK1|CLPX_RICAH ATP-dependent Clp protease ATP-binding subunit clpX OS=Rickettsia akari (strain Hartford)
Align length 40
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916938|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G08.
         (397 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8GPK1|CLPX_RICAH ATP-dependent Clp protease ATP-binding subu...    30   4.9  

>sp|A8GPK1|CLPX_RICAH ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Rickettsia akari (strain Hartford) GN=clpX PE=3
           SV=1
          Length = 425

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 205 CAHLDTDV*IKHTRPVIEGFTLAMPTPQVLGC*LADYSIG 324
           C  L TD+  + +R  ++  T ++PTPQ +   L DY +G
Sbjct: 37  CIDLCTDIMKEESRVALKQITSSIPTPQKICAILNDYVVG 76
tr_hit_id B0TY58
Definition tr|B0TY58|B0TY58_FRAP2 Putative uncharacterized protein OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017)
Align length 47
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916938|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_G08.
         (397 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0TY58|B0TY58_FRAP2 Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A7NBB5|A7NBB5_FRATF Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A4IYM2|A4IYM2_FRATW Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A0Q743|A0Q743_FRATN Putative uncharacterized protein OS=Franc...    33   5.4  
tr|B4AR55|B4AR55_FRANO Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A7YT78|A7YT78_FRATU Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A7JMK4|A7JMK4_FRANO Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A7JIG0|A7JIG0_FRANO Putative uncharacterized protein OS=Franc...    33   5.4  
tr|A4KQS6|A4KQS6_FRATU Putative uncharacterized protein (Fragmen...    33   5.4  
tr|B2T0K6|B2T0K6_BURPP Putative uncharacterized protein OS=Burkh...    33   9.2  

>tr|B0TY58|B0TY58_FRAP2 Putative uncharacterized protein
           OS=Francisella philomiragia subsp. philomiragia (strain
           ATCC 25017) GN=Fphi_0080 PE=4 SV=1
          Length = 482

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A7NBB5|A7NBB5_FRATF Putative uncharacterized protein
           OS=Francisella tularensis subsp. holarctica (strain FTA)
           GN=FTA_0792 PE=4 SV=1
          Length = 455

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A4IYM2|A4IYM2_FRATW Putative uncharacterized protein
           OS=Francisella tularensis subsp. tularensis (strain
           WY96-3418) GN=FTW_1242 PE=4 SV=1
          Length = 422

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 246 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 292


>tr|A0Q743|A0Q743_FRATN Putative uncharacterized protein
           OS=Francisella tularensis subsp. novicida (strain U112)
           GN=FTN_1172 PE=4 SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|B4AR55|B4AR55_FRANO Putative uncharacterized protein
           OS=Francisella novicida FTE GN=FTE_0569 PE=4 SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A7YT78|A7YT78_FRATU Putative uncharacterized protein
           OS=Francisella tularensis subsp. holarctica FSC022
           GN=FTAG_00075 PE=4 SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A7JMK4|A7JMK4_FRANO Putative uncharacterized protein
           OS=Francisella novicida GA99-3548 GN=FTDG_00745 PE=4
           SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A7JIG0|A7JIG0_FRANO Putative uncharacterized protein
           OS=Francisella novicida GA99-3549 GN=FTCG_00700 PE=4
           SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 243 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 289


>tr|A4KQS6|A4KQS6_FRATU Putative uncharacterized protein (Fragment)
           OS=Francisella tularensis subsp. holarctica 257
           GN=FTHG_00704 PE=4 SV=1
          Length = 447

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 102 HPILAEK*SQHISFGSDCTIHHNPFTVKTKPSSKMCTP*YRRVDQAY 242
           H  LA K    +  GSD  +H+N   +KT    K+ T  YRR+D  +
Sbjct: 235 HSYLARKMGCELVQGSDLFVHNNYVYLKTTKGPKLVTVVYRRIDDKF 281


>tr|B2T0K6|B2T0K6_BURPP Putative uncharacterized protein
           OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
           GN=Bphyt_0891 PE=4 SV=1
          Length = 419

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 130 WLHFSAKMGWLCALH*WFHLLLLYSDRWVNNRDVGLF 20
           +LHF    GWL A   +F L  L +DRW+N    G+F
Sbjct: 250 YLHF----GWLSAFFHYFVLDFLLADRWINGLGKGMF 282