BP916947
Clone id YMU001_000093_H05
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAAAAAGAGGGGATTTCATGTGTAGGCATTGGGGCTACATAAGAAATAAATTTCAAGTG
TTTTTACCAATGCCCAATGCGTTTTTACCACCAGTCCCTTTGCAGCCGGAATCAAAAGAC
CTTTCGCAAGGGATTTACTCATTGCCAACTATGAACAATGCACCATATGCTTGCAGCTTT
CTTTGAAGAGGCTCTTTCATCAATTTTCCCAATGGTGTAGCAGGTATCATAATGCTTCAC
CTTGTTTTGTAATGTGAAGATCTCTAATTTGGATGATTAACATCATGCTCCTTTCACACC
CAATGGTCAGTGCAGAGCTACACCAATGGGGGTTG
■■Homology search results ■■ -
sp_hit_id Q9H8Y8
Definition sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Homo sapiens
Align length 37
Score (bit) 34.3
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916947|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_H05.
(335 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Hom... 34 0.20
sp|Q9JL04|FMN2_MOUSE Formin-2 OS=Mus musculus GN=Fmn2 PE=1 SV=2 32 1.3
sp|Q9R064|GORS2_RAT Golgi reassembly-stacking protein 2 OS=Rattu... 29 6.4
sp|A0PG75|PLS5_HUMAN Phospholipid scramblase family member 5 OS=... 29 8.4

>sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Homo
sapiens GN=GORASP2 PE=1 SV=3
Length = 452

Score = 34.3 bits (77), Expect = 0.20
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 358 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 394


>sp|Q9JL04|FMN2_MOUSE Formin-2 OS=Mus musculus GN=Fmn2 PE=1 SV=2
Length = 1578

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1

Query: 67 PMPNAFLPPVPLQPESKDLSQGIYSLPTMNNAPYACSFL*RGSFINFPNGVAGIIM 234
P P A +PP PL P S T+ AP C FL F P G+ G+ M
Sbjct: 1081 PPPGAGIPPPPLLPGSGPPHSSQVGSSTLPAAPQGCGFL----FPPLPTGLFGLGM 1132


>sp|Q9R064|GORS2_RAT Golgi reassembly-stacking protein 2 OS=Rattus
norvegicus GN=Gorasp2 PE=1 SV=3
Length = 454

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLS---QGIYSLPTM 153
LPMP+ FLP PL PE + + + SLP M
Sbjct: 362 LPMPSDFLPSFPLVPEGSSAASAGEPLSSLPAM 394


>sp|A0PG75|PLS5_HUMAN Phospholipid scramblase family member 5
OS=Homo sapiens GN=PLSCR5 PE=2 SV=1
Length = 271

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1

Query: 52 FQVFLPMPNAFLPPVPLQPESKDLSQ 129
+Q+ LP+P++FLP V L P + LSQ
Sbjct: 38 WQLSLPLPSSFLPTVSLPPGLEYLSQ 63


tr_hit_id Q53TE3
Definition tr|Q53TE3|Q53TE3_HUMAN Putative uncharacterized protein GORASP2 (Golgi reassembly stacking protein 2, 55kDa, isoform CRA_c) OS=Homo sapiens
Align length 37
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916947|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_H05.
(335 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q53TE3|Q53TE3_HUMAN Putative uncharacterized protein GORASP2 ... 34 3.2
tr|B4DQF1|B4DQF1_HUMAN cDNA FLJ55810, highly similar to Golgi re... 34 3.2
tr|B4DNR1|B4DNR1_HUMAN cDNA FLJ55232, highly similar to Golgi re... 34 3.2
tr|B4DKT0|B4DKT0_HUMAN cDNA FLJ59712, highly similar to Golgi re... 34 3.2
tr|B4DEI4|B4DEI4_HUMAN cDNA FLJ54595, highly similar to Golgi re... 34 3.2
tr|B1XK36|B1XK36_SYNP2 Putative uncharacterized protein OS=Synec... 33 5.5
tr|B8C3P4|B8C3P4_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.4

>tr|Q53TE3|Q53TE3_HUMAN Putative uncharacterized protein GORASP2
(Golgi reassembly stacking protein 2, 55kDa, isoform
CRA_c) OS=Homo sapiens GN=GORASP2 PE=2 SV=1
Length = 452

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 358 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 394


>tr|B4DQF1|B4DQF1_HUMAN cDNA FLJ55810, highly similar to Golgi
reassembly-stacking protein 2 OS=Homo sapiens PE=2 SV=1
Length = 310

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 216 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 252


>tr|B4DNR1|B4DNR1_HUMAN cDNA FLJ55232, highly similar to Golgi
reassembly-stacking protein 2 OS=Homo sapiens PE=2 SV=1
Length = 408

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 314 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 350


>tr|B4DKT0|B4DKT0_HUMAN cDNA FLJ59712, highly similar to Golgi
reassembly-stacking protein 2 OS=Homo sapiens PE=2 SV=1
Length = 464

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 370 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 406


>tr|B4DEI4|B4DEI4_HUMAN cDNA FLJ54595, highly similar to Golgi
reassembly-stacking protein 2 OS=Homo sapiens PE=2 SV=1
Length = 405

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1

Query: 64 LPMPNAFLPPVPLQPESKDLSQG---IYSLPTMNNAP 165
LP+P+ FLP PL PES + + SLP +NAP
Sbjct: 311 LPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAP 347


>tr|B1XK36|B1XK36_SYNP2 Putative uncharacterized protein
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=SYNPCC7002_A2413 PE=4 SV=1
Length = 331

Score = 33.5 bits (75), Expect = 5.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1

Query: 40 IRNKFQVFLPMPNAFLPPVPLQPESKDLSQGIYSLPTMNNAPYACSF 180
+ + F F P L P PL+PE L+ IY T+NN Y C F
Sbjct: 152 LNDAFNRFAKFPERDLYPEPLRPEGDHLNDLIYH--TVNNGVYKCGF 196


>tr|B8C3P4|B8C3P4_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_22880 PE=4 SV=1
Length = 203

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1

Query: 203 LMKEPL-QRKLQAYGALFIVGNE*IPCERSFDSGCKGTGGKNALGIGKN 60
++ EP+ + +L G + VG E +PCERS G G GGK G+ N
Sbjct: 112 VIAEPVTEEQLYNSGGVITVGGE-VPCERSRSGGMFGVGGKEDGGVELN 159