BP916950 |
Clone id |
YMU001_000093_H08 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_H08. |
Accession |
BP916950 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL69Contig1 |
Sequence |
AATTCGCGGCCGCGAATTCTTCCAGAATACTTGGTCACACCCTCAGTAGAGGCATGAGCT CGGTGAGCTGTGCCAAAGGCATCATTGACATAGAGATCAGCTACAGAGGCAAGCTTCTTG GCATGCTCAGGTTCATTCTTCTCTTCCTCCTTGTAGAACCTCACATTCTCCAAAAGCAGC ACTCCACCATCAGGTAGAGCAGCCACTTTCTTCTCCACTTCCTCTCCGATCGAGTCGTCA GCCTTTTCCACCTTGAAGCCTAGTAGTTCAGACAACCTTGGAACCAAAGGGTTCAATCTG AATTTCTCTGTGACACCCTTGGGACGCCCCAGATGGGTAGTGAGGATGACCTTGGCACCA TTCTCGGTGAGGTACTTGATAGTGGGAATGGCAGCACGAATGCGAGTATCGTCAGTGATC TTCAAACTGTCATCAAGAGGTACATTCAAATCGGCCCTCACAAAAACCTTCTTGCCCTTG AGGTCAGCCTCCTTAAGATCTCCCACGCTCCTCTTAGCCATGCACACCACCACTCCCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P50318 |
Definition |
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana |
Align length |
168 |
Score (bit) |
276.0 |
E-value |
5.0e-74 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916950|Adiantum capillus-veneris mRNA, clone: YMU001_000093_H08. (514 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 276 5e-74 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 273 3e-73 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 269 7e-72 sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 268 9e-72 sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 263 4e-70 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 261 1e-69 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 242 7e-64 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 241 2e-63 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 233 5e-61 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 231 2e-60 sp|Q7NI70|PGK_GLOVI Phosphoglycerate kinase OS=Gloeobacter viola... 218 1e-56 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 216 5e-56 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 214 2e-55 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 209 8e-54 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 205 1e-52 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 203 4e-52 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 203 4e-52 sp|A5GPB2|PGK_SYNPW Phosphoglycerate kinase OS=Synechococcus sp.... 202 6e-52 sp|Q7V390|PGK_PROMP Phosphoglycerate kinase OS=Prochlorococcus m... 202 1e-51 sp|A2BUH2|PGK_PROM5 Phosphoglycerate kinase OS=Prochlorococcus m... 202 1e-51 sp|Q7V461|PGK_PROMM Phosphoglycerate kinase OS=Prochlorococcus m... 201 1e-51 sp|Q3AGU1|PGK_SYNSC Phosphoglycerate kinase OS=Synechococcus sp.... 201 2e-51 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 201 2e-51 sp|Q8DGP7|PGK_THEEB Phosphoglycerate kinase OS=Thermosynechococc... 200 3e-51 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 200 4e-51 sp|A2CDG7|PGK_PROM3 Phosphoglycerate kinase OS=Prochlorococcus m... 200 4e-51 sp|A8FHJ3|PGK_BACP2 Phosphoglycerate kinase OS=Bacillus pumilus ... 200 4e-51 sp|Q7U3V0|PGK_SYNPX Phosphoglycerate kinase OS=Synechococcus sp.... 199 6e-51 sp|Q3AFD1|PGK_CARHZ Phosphoglycerate kinase OS=Carboxydothermus ... 199 6e-51 sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus m... 199 8e-51
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 276 bits (705), Expect = 5e-74 Identities = 140/168 (83%), Positives = 151/168 (89%) Frame = -1
Query: 505 VVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAK 326 V+ MAK+SVGDL DLKGKKVFVRADLNVPLDD+ ITDDTRIRAAIPTIK+L ENGAK Sbjct: 71 VITMAKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAK 130
Query: 325 VILTTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLL 146 VIL+THLGRPKGVT KF L PLVPRLSELLG +V KADD IG EVE VA+LP+GGVLLL Sbjct: 131 VILSTHLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLL 190
Query: 145 ENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 ENVRFYKEEEKNEP+ AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 191 ENVRFYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 238
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 273 bits (699), Expect = 3e-73 Identities = 140/168 (83%), Positives = 150/168 (89%) Frame = -1
Query: 505 VVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAK 326 V MAK+SVGDL ADLKGKKVFVRADLNVPLDDS ITDDTRIRAAIPTIK+L NGAK Sbjct: 26 VASMAKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAK 85
Query: 325 VILTTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLL 146 VIL++HLGRPKGVT KF L PLVPRLSELLG +V KADD IG +VEK VA LP+GGVLLL Sbjct: 86 VILSSHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLL 145
Query: 145 ENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 ENVRFYKEEEKN+PE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 146 ENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 193
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 269 bits (687), Expect = 7e-72 Identities = 139/163 (85%), Positives = 145/163 (88%) Frame = -1
Query: 490 KRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTT 311 KRSVG L EADLKGKKVFVRADLNVPLDD+ KITDDTRIRA+IPTIKYL E GAKVIL + Sbjct: 4 KRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILAS 63
Query: 310 HLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRF 131 HLGRPKGVT KF L PLV RLSELLG +V A D IGEEVEK AALPDGGVLLLENVRF Sbjct: 64 HLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRF 123
Query: 130 YKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 YKEEEKN+PE AKKLASVADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 124 YKEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKF 166
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 268 bits (686), Expect = 9e-72 Identities = 136/168 (80%), Positives = 150/168 (89%) Frame = -1
Query: 505 VVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAK 326 V MAK+SVGDL A+LKGKKVFVRADLNVPLDD+ ITDDTRIRAA+PTIK+L NGAK Sbjct: 73 VASMAKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAK 132
Query: 325 VILTTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLL 146 VIL++HLGRPKGVT K+ L PLVPRLSELLG +V K +D IG EVEK VA+LP+GGVLLL Sbjct: 133 VILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLL 192
Query: 145 ENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 ENVRFYKEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 193 ENVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 240
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 263 bits (672), Expect = 4e-70 Identities = 135/168 (80%), Positives = 148/168 (88%) Frame = -1
Query: 505 VVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAK 326 V MAK+SVGDL ADL+GK+V VRADLNVPLDD+ ITDDTRIRAAIPTIKYL NGAK Sbjct: 70 VATMAKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAK 129
Query: 325 VILTTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLL 146 VILT+HLGRPKGVT KF L PLVPRLSELLG +V+KA+D IG EVEK VA L +G VLLL Sbjct: 130 VILTSHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLL 189
Query: 145 ENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 ENVRFYKEEEKN+PE AKKLAS+ADL+VNDAFGTAHRAHASTEGVTK+ Sbjct: 190 ENVRFYKEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKF 237
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 261 bits (667), Expect = 1e-69 Identities = 130/163 (79%), Positives = 146/163 (89%) Frame = -1
Query: 490 KRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTT 311 K+SVG LKEADLKGK+VFVR DLNVPLD++ ITDDTRIRAA+PTIKYL ++G+ VIL + Sbjct: 4 KKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILAS 63
Query: 310 HLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRF 131 HLGRPKGVT K+ L PLVPRLSELLG +V+ A+DSIG EVEK VA +P+GGVLLLENVRF Sbjct: 64 HLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRF 123
Query: 130 YKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 YKEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGV KY Sbjct: 124 YKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKY 166
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1 Length = 462
Score = 242 bits (618), Expect = 7e-64 Identities = 127/171 (74%), Positives = 147/171 (85%), Gaps = 2/171 (1%) Frame = -1
Query: 508 VVVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDD-SLKITDDTRIRAAIPTIKYLTENG 332 +VV K+SVGDL +ADL+GK+VFVRADLNVPLD +L ITDDTRIRAA+PT+KYL +NG Sbjct: 57 IVVEAVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNG 116
Query: 331 AKVILTTHLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGV 155 AKV+LT+HLGRPKG E K+RL P+V RLSELLG +V+K DD IG VE+ VA+L G + Sbjct: 117 AKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGEL 176
Query: 154 LLLENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 LLLENVRFYKEEEKN+PE AKKLAS ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 177 LLLENVRFYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKF 227
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1 Length = 461
Score = 241 bits (614), Expect = 2e-63 Identities = 127/170 (74%), Positives = 144/170 (84%), Gaps = 2/170 (1%) Frame = -1
Query: 505 VVCMAKRSVGDLKEADLKGKKVFVRADLNVPLDDS-LKITDDTRIRAAIPTIKYLTENGA 329 VV K+SVGDL +ADL+GK+VFVRADLNVPLD + L ITDDTRIRAA+PT+KYL +NGA Sbjct: 57 VVEAVKKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGA 116
Query: 328 KVILTTHLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVL 152 KV+LT+HLGRPKG E K+RL P+V RLSELLG V K DD IG EVEK V A+ +G +L Sbjct: 117 KVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELL 176
Query: 151 LLENVRFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 LLEN RFYKEEEKNEPE AKKLA+ ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 177 LLENCRFYKEEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKF 226
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 233 bits (593), Expect = 5e-61 Identities = 118/165 (71%), Positives = 134/165 (81%) Frame = -1
Query: 496 MAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVIL 317 M+K++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL Sbjct: 1 MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVIL 60
Query: 316 TTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENV 137 +H GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVAAL +G VLLLENV Sbjct: 61 ASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENV 120
Query: 136 RFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 RFYKEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+ Sbjct: 121 RFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKF 165
>sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1 Length = 400
Score = 231 bits (588), Expect = 2e-60 Identities = 117/165 (70%), Positives = 133/165 (80%) Frame = -1
Query: 496 MAKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVIL 317 M+K++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL Sbjct: 1 MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVIL 60
Query: 316 TTHLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENV 137 +H GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVA L +G VLLLENV Sbjct: 61 ASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENV 120
Query: 136 RFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 RFYKEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+ Sbjct: 121 RFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKF 165
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5CAF8 |
Definition |
tr|A5CAF8|A5CAF8_VITVI Phosphoglycerate kinase OS=Vitis vinifera |
Align length |
168 |
Score (bit) |
280.0 |
E-value |
2.0e-74 |
Report |
|