BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916959|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_A07.
         (277 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9BF33|RPOB_PETMO DNA-directed RNA polymerase subunit beta OS...    29   6.4  
sp|Q1DY99|XPOT_COCIM Exportin-T OS=Coccidioides immitis GN=LOS1 ...    29   8.3  

>sp|A9BF33|RPOB_PETMO DNA-directed RNA polymerase subunit beta
            OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpoB
            PE=3 SV=1
          Length = 1187

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 63   LAINMQVNCSLTSKYTLSIFDKLSGPYSNERIALTVL 173
            + +N  V   + +K TL + DKL+G + N+ +  T+L
Sbjct: 922  IGVNKYVKVFIATKKTLQVGDKLAGRHGNKGVISTIL 958


>sp|Q1DY99|XPOT_COCIM Exportin-T OS=Coccidioides immitis GN=LOS1
           PE=3 SV=1
          Length = 1033

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 145 LYGPDSLSNIDKVYFEVKLQLTCMFMASVLWAVWYNEHMEDL 20
           +YGPD  +  D    + K+  T  ++ S L+A  +N   +D+
Sbjct: 92  MYGPDGAAQSDPSNIQNKIAQTITYLFSALYATEWNTFFDDI 133

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916959|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_A07.
         (277 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SSI8|A9SSI8_PHYPA Predicted protein OS=Physcomitrella paten...    56   8e-07
tr|A4HMM0|A4HMM0_LEIBR Putative uncharacterized protein OS=Leish...    37   0.50 
tr|Q76MR1|Q76MR1_TAEGU Metabotropic GluR2 (Fragment) OS=Taeniopy...    33   9.4  

>tr|A9SSI8|A9SSI8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234032 PE=4 SV=1
          Length = 379

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
 Frame = -1

Query: 271 IFSSTSLAGIVLRRALGYISFAVCFSVLVTGFARTVSAIRSLLYGPDSLSNIDKVYFEVK 92
           +F S+S  G++  R    +    C+SV+VT F +  S IR  ++  D LS +D +YFE  
Sbjct: 223 MFLSSSKTGMMFWRTALSVGLGFCYSVIVTAFTKLASFIRFRVFVADELSEVDILYFEAH 282

Query: 91  LQLTCMFMASVLWAVW----YNEHME 26
           LQ   +F+AS+    W    Y +H++
Sbjct: 283 LQALFLFVASMFSFFWLDADYEQHLD 308


>tr|A4HMM0|A4HMM0_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM34_V2.1910 PE=4 SV=1
          Length = 925

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -3

Query: 272 DIFQHQPGWH--CLKESSGLHFVCSVLFGACNRVCKNSKCNTLVAVW 138
           D+ + +  WH  CL  S  +H    +L G C  + K  +C+T  AVW
Sbjct: 349 DLREKRVSWHLHCLIASKEVHSAARLLLGTCRDISKGLRCDTAEAVW 395


>tr|Q76MR1|Q76MR1_TAEGU Metabotropic GluR2 (Fragment) OS=Taeniopygia
           guttata PE=2 SV=1
          Length = 594

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -1

Query: 274 WIFSSTSLAGIVLRRALGY-ISFAVCFSVLVT---GFARTVSAIRSLLYGPDSLSNIDKV 107
           +IF +    G+   R LG   SFAVC+S L+T     AR  S ++  +  P  +S   +V
Sbjct: 451 FIFIAKPSTGVCTLRRLGLGTSFAVCYSALLTKTNRIARIFSGVKEGVQRPRFISPTSQV 510

Query: 106 YFEVKLQLTCMFMASVLW 53
              + L ++C  +  ++W
Sbjct: 511 VICMAL-ISCQLIIVIIW 527