BP916967 |
Clone id |
YMU001_000094_B04 |
Library |
YMU01 |
Length |
485 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_B04. |
Accession |
BP916967 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL67Contig1 |
Sequence |
ATACACTTCAATTCGGGTGGGATTCTAAATCACACCAAGACAAGCCGCCTCGATGCATTC TCATGCAGACTCTTGCACTGGGTACTCAAACACTACTTCCTTGCCGGTCAGCTTCTATAT AAACTCCGCATGAATGTTTCCAACTTGTACTCAGCGCTGTTCCTGTCCTTTGGATCTAAA TACACCCGCATGATTCTTGAACCGATCCAGACGGAAGCGTACTCGCTTTCCAACAATCTC AGCCGGGTACACCAAATCTTCGAGAATAGCTTCATGAACAGCTGTTAGTGTACGATTACG AGGGCGAGCTACAGCCGTCCCTTTCTTTGGAGGCCTCAAAATACGTCTAGTGGCAATCAT AATAACATCCTTCCCACTGAACTTCTTCTCCAACTCCCGGACAAGACGAGAGTGAATTTC TCGGAAGGCTTTGCAGAGCCTGTAAGGCACGTGGATGATAACAGCCTTCCGGCTTCCTGA AATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M885 |
Definition |
sp|Q9M885|RS72_ARATH 40S ribosomal protein S7-2 OS=Arabidopsis thaliana |
Align length |
139 |
Score (bit) |
171.0 |
E-value |
2.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
139 |
Score (bit) |
178.0 |
E-value |
1.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916967|Adiantum capillus-veneris mRNA, clone: YMU001_000094_B04. (485 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 178 1e-43 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 177 2e-43 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 156 2e-43 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 175 9e-43 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 175 1e-42 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 174 3e-42 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 173 3e-42 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 172 6e-42 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 171 2e-41 tr|B4FEF4|B4FEF4_MAIZE Putative uncharacterized protein OS=Zea m... 171 2e-41 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 170 4e-41 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 169 5e-41 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 169 8e-41 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 169 8e-41 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 169 8e-41 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 168 1e-40 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 168 1e-40 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 168 1e-40 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 168 1e-40 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 168 1e-40 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 168 1e-40 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 168 1e-40 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 167 2e-40 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 167 3e-40 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 167 3e-40 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 167 3e-40 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 164 2e-39 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 164 2e-39 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 162 8e-39
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 178 bits (451), Expect = 1e-43 Identities = 94/139 (67%), Positives = 112/139 (80%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 +SG+RKAV+IHVPYRL KAF++IH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV R Sbjct: 55 VSGNRKAVVIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNR 114
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR+RTLTAVHEA+LEDLVYP+EIVGKRVR+RLD + K + ++ A Sbjct: 115 PRSRTLTAVHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYKL-ETFAG 173
Query: 123 FI*KLTGKEVVFEYPVQES 67 KLTGKEV FEYP+QE+ Sbjct: 174 VYKKLTGKEVTFEYPIQEA 192
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 177 bits (450), Expect = 2e-43 Identities = 94/140 (67%), Positives = 112/140 (80%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 +SG+RKAVIIHVPYRL KAF++IH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV R Sbjct: 55 VSGNRKAVIIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNR 114
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR+RTLT VHEA+LEDLVYP+EIVGKRVR+RLD + K + ++ A Sbjct: 115 PRSRTLTTVHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKL-ETFAG 173
Query: 123 FI*KLTGKEVVFEYPVQESA 64 KLTGKEV FEYP+QE+A Sbjct: 174 VYKKLTGKEVTFEYPIQEAA 193
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 156 bits (395), Expect(2) = 2e-43 Identities = 74/96 (77%), Positives = 89/96 (92%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ++G+RKAV+IH+PYRL KA+R+IH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ R Sbjct: 54 VAGNRKAVVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVR 113
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFK 196 PR+RTLTAVH+A LED+VYPAEIVGKR+R+ LD K Sbjct: 114 PRSRTLTAVHDATLEDVVYPAEIVGKRIRYHLDGSK 149
Score = 42.4 bits (98), Expect(2) = 2e-43 Identities = 16/24 (66%), Positives = 23/24 (95%) Frame = -1
Query: 203 GSRIMRVYLDPKDRNSAEYKLETF 132 GS+I++++LDPK+RN+ EYKLETF Sbjct: 147 GSKIIKIFLDPKERNTTEYKLETF 170
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 176 bits (447), Expect = 4e-43 Identities = 93/140 (66%), Positives = 114/140 (81%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 +SG+RKAVIIHVPYRL KAF++IH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV R Sbjct: 55 VSGNRKAVIIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNR 114
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR+RTLTAVHEA+LEDLV+P+EIVGKRVR+RLD + K + ++ + A Sbjct: 115 PRSRTLTAVHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKL-DTFAG 173
Query: 123 FI*KLTGKEVVFEYPVQESA 64 KLTGKEV FEYP+QE++ Sbjct: 174 VYKKLTGKEVTFEYPIQETS 193
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 175 bits (444), Expect = 9e-43 Identities = 93/143 (65%), Positives = 111/143 (77%), Gaps = 3/143 (2%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ISG+RKAV++HVPYRL KAFR+IH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A R Sbjct: 54 ISGNRKAVVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVR 113
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDR---FKNHAGVFRSKGQEQR*VQVGNI 133 PR+RTLTAVHEAILEDLVYPAEIVGKRVR+RLD K + E + G + Sbjct: 114 PRSRTLTAVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNTEYKLETFGGV 173
Query: 132 HAEFI*KLTGKEVVFEYPVQESA 64 + KL GK+VVFEYP+ E++ Sbjct: 174 YR----KLCGKDVVFEYPLSEAS 192
>tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 218
Score = 175 bits (443), Expect = 1e-42 Identities = 93/139 (66%), Positives = 111/139 (79%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ISG+RKAV+I+VPYRL KAFR+IH RLVRELEKKFSGKDVI++ATRRILRPPKKG+AV R Sbjct: 81 ISGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVIVVATRRILRPPKKGSAVQR 140
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR RTLTAVHEA LED+V+PAEIVGKR+RFRLD K +K + ++ + Sbjct: 141 PRTRTLTAVHEATLEDVVFPAEIVGKRIRFRLDGSKIQKVFLDTKERNNTEYKLETMMGV 200
Query: 123 FI*KLTGKEVVFEYPVQES 67 + KLTGK+VVFEYPV E+ Sbjct: 201 YR-KLTGKDVVFEYPVVEA 218
>tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 199
Score = 174 bits (440), Expect = 3e-42 Identities = 91/138 (65%), Positives = 110/138 (79%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ISG+RKAV+I+VP+RL KAFR+IH RLVRELEKKFSGKDVI++ATRRILRPPKKG+AV R Sbjct: 63 ISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIVVATRRILRPPKKGSAVQR 122
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR RTLTAVHEA+LED+ YPAEIVGKR+RFRLD K +K + ++ + Sbjct: 123 PRTRTLTAVHEAMLEDVAYPAEIVGKRIRFRLDGSKVQKIFLDAKERNNTEYKLETMMGV 182
Query: 123 FI*KLTGKEVVFEYPVQE 70 + KLTGK+VVFEYP+ E Sbjct: 183 YR-KLTGKDVVFEYPINE 199
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 173 bits (439), Expect = 3e-42 Identities = 90/139 (64%), Positives = 111/139 (79%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 +SG+RKAVIIHVP+RL KAF++IH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV R Sbjct: 55 VSGNRKAVIIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNR 114
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR+RTLTAVHEA+LEDLVYP+EIVGKR+R+RLD + K + ++ ++ Sbjct: 115 PRSRTLTAVHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNSTEYKL-ETYSG 173
Query: 123 FI*KLTGKEVVFEYPVQES 67 KLTGKEV FEYP+QE+ Sbjct: 174 VYKKLTGKEVTFEYPIQEA 192
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 172 bits (437), Expect = 6e-42 Identities = 92/139 (66%), Positives = 108/139 (77%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ++G+RKAV+IHVPYRL KAFR+IH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV R Sbjct: 54 VAGNRKAVVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVR 113
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR+RTLT VHEA+LED+VYPAEIVGKR+R+RLD K +F + + A Sbjct: 114 PRSRTLTHVHEAMLEDIVYPAEIVGKRIRYRLDGSK-IIKIFLDPKERNNTEYKLDSFAG 172
Query: 123 FI*KLTGKEVVFEYPVQES 67 KLTGK VVFEYPV E+ Sbjct: 173 VYRKLTGKNVVFEYPVTEA 191
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 171 bits (433), Expect = 2e-41 Identities = 90/140 (64%), Positives = 110/140 (78%) Frame = -3
Query: 483 ISGSRKAVIIHVPYRLCKAFREIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVAR 304 ++GSRKAV+IHVPYRL KAFR+IH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV R Sbjct: 54 VTGSRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLR 113
Query: 303 PRNRTLTAVHEAILEDLVYPAEIVGKRVRFRLDRFKNHAGVFRSKGQEQR*VQVGNIHAE 124 PR RTLTAVH+ ILED+VYPAEIVGKRVR+RLD K K + ++ A Sbjct: 114 PRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLETCTAV 173
Query: 123 FI*KLTGKEVVFEYPVQESA 64 + +L GK+VVFEYP+ E+A Sbjct: 174 YR-RLCGKDVVFEYPMTENA 192
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