BP916969
Clone id YMU001_000094_B06
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TACCTCAAGCTTGTACACCTCTATTGAGCACTCAATCATCCCCCTGAGATAGCAATGGAA
ACATAACCCATCTCTTTCATACAATTCTTCTCAAGTGATTGTGACCTTTGGGCAACTCAT
TATCAACACTTATGAGTGTCCCTGCAATCGGCATTCTAGAGGCTCCTACTTTCATCTCTT
TCCTTGGCTTCTTGTAAAAATTTGTGTCACCATTCTAGCATACTCTCTACACTTAGCCAA
ATGCTTGTGGGAGAAACTCTAAAACCCATGACTTTCAAAAGCAATTGACGAAGCGACAGC
AATGCCTCTCTCCAACAGCACGGTTGACAACCAGTTGTTGTACACATTTGCTTTATCAAA
TGTTGGCTATCTTTGCTTCATCTGTGTACACATACCCACTAGAGCTTTCTGGCTTTGAAA
GAACAATTCCAGAATAGCACTCTC
■■Homology search results ■■ -
sp_hit_id Q28CZ9
Definition sp|Q28CZ9|NB5R4_XENTR Cytochrome b5 reductase 4 OS=Xenopus tropicalis
Align length 65
Score (bit) 29.6
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916969|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B06.
(444 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q28CZ9|NB5R4_XENTR Cytochrome b5 reductase 4 OS=Xenopus tropi... 30 5.9
sp|A0Q2Q0|GATA_CLONN Glutamyl-tRNA(Gln) amidotransferase subunit... 29 10.0

>sp|Q28CZ9|NB5R4_XENTR Cytochrome b5 reductase 4 OS=Xenopus
tropicalis GN=cyb5r4 PE=2 SV=1
Length = 523

Score = 29.6 bits (65), Expect = 5.9
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +3

Query: 210 PF*HTLYT*PNACGRNSKTHDFQKQLTKRQQCLSPTARLTTSCCTHLLYQMLAIFASSVY 389
P H +Y N G D K T CL P A+ +T C LY M+ I+ +
Sbjct: 308 PVGHHIYLKMNISGV-----DIVKPYTPVASCLLPDAQYSTFCNKQCLYLMIKIYPNGSI 362

Query: 390 TYPLE 404
T LE
Sbjct: 363 TPHLE 367


>sp|A0Q2Q0|GATA_CLONN Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Clostridium novyi (strain NT) GN=gatA PE=3 SV=1
Length = 485

Score = 28.9 bits (63), Expect = 10.0
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3

Query: 270 DFQKQLTKRQQCLSPTARLTTSCCTHLLYQMLAIFASSVYTYPLELSG 413
DF++ L + ++PT+++T ++L++++S YT P ++G
Sbjct: 388 DFKRVLKEVDAIITPTSKVTAFKFGERTKEVLSMYSSDEYTVPASIAG 435


tr_hit_id Q2SHD4
Definition tr|Q2SHD4|Q2SHD4_HAHCH Putative uncharacterized protein OS=Hahella chejuensis (strain KCTC 2396)
Align length 47
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916969|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B06.
(444 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2SHD4|Q2SHD4_HAHCH Putative uncharacterized protein OS=Hahel... 33 7.0

>tr|Q2SHD4|Q2SHD4_HAHCH Putative uncharacterized protein OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_03177 PE=4 SV=1
Length = 567

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3

Query: 255 NSKTHDFQKQLTKRQQCLSPTARLTTSCCTHLLYQMLAIFASSVYTY 395
N K FQ+++T+ QC++PT TTS C + +++ Y+Y
Sbjct: 477 NDKMSRFQRKITRNGQCINPTTGSTTSQCWSDWNVLTTTSSNAPYSY 523