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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916972
Clone id YMU001_000094_B10
Library
Length 198
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAAAAATCTAAAACGACTACCTTTCCAGCCAAATCCTTCTGTAACTTTAGAGGAGCTGT
GTAGAGCCATTCTAGCTGTGGCTGAAATTCTGGAACCTGCTGTCCTCCCCCACGCTTCTC
TAAATCCTCTATGTAGCTTAAAAATCTTGCAGTACGATCAGATTCAGCTGCTCCGCTAGC
TACTGATGGTTGAAACAG
■■Homology search results ■■ -
sp_hit_id Q5ZI67
Definition sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus
Align length 46
Score (bit) 44.7
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916972|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B10.
         (198 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus ...    45   1e-04
sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus mus...    44   2e-04
sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo sa...    43   6e-04
sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2 OS=Bos tau...    43   6e-04
sp|Q6IQX7|CHSS2_MOUSE Chondroitin sulfate synthase 2 OS=Mus musc...    30   2.9  
sp|O58816|METE_PYRHO Probable methylcobalamin:homocysteine methy...    29   8.4  

>sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus
           gallus GN=NHLRC2 PE=2 SV=1
          Length = 727

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -1

Query: 135 YIEDLEKRGGGQQVPEFQPQLEWLYT-APLKLQKDLAGKVVVLDFW 1
           Y++ ++ R     VPE    L+WL T  P+ L KDL GKVVVLDF+
Sbjct: 36  YLKKMDSRERDLTVPELSRDLQWLNTEGPISLHKDLCGKVVVLDFF 81


>sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus
           musculus GN=Nhlrc2 PE=2 SV=1
          Length = 725

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = -1

Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1
           L+K  G +Q   VPEF   LEWL T  PL + KDL GKVVVLDF+
Sbjct: 42  LQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFF 86


>sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo
           sapiens GN=NHLRC2 PE=1 SV=1
          Length = 726

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = -1

Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1
           L+K  G +Q   VPEF   LEWL T  P+ + KDL GK+VVLDF+
Sbjct: 42  LQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFF 86


>sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2 OS=Bos taurus
           GN=NHLRC2 PE=2 SV=1
          Length = 726

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = -1

Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1
           L+K  G +Q   VPEF   LEWL T  P+ + KDL GKVV+LDF+
Sbjct: 42  LQKVDGWEQDLLVPEFPEGLEWLNTEEPISVYKDLCGKVVILDFF 86


>sp|Q6IQX7|CHSS2_MOUSE Chondroitin sulfate synthase 2 OS=Mus
           musculus GN=Chpf PE=2 SV=1
          Length = 774

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = -1

Query: 198 LFQPSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKV 19
           L++P  A  AA SD  A   +++ +LE+R  G +VP    Q      +PL+L  DL  K 
Sbjct: 547 LYEPRQAQRAAHSDVFAPVKAHVAELERRFPGARVPWLSVQT--AAPSPLRLM-DLLSKK 603

Query: 18  VVLD 7
             LD
Sbjct: 604 HPLD 607


>sp|O58816|METE_PYRHO Probable methylcobalamin:homocysteine
           methyltransferase OS=Pyrococcus horikoshii GN=metE PE=3
           SV=1
          Length = 338

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +3

Query: 33  NPSV-TLEELCRAILAVAEILEPAVLPHASLNPLCSLKIL 149
           NP + ++EE+ +AI  V E +EP +L    +NP C +K+L
Sbjct: 263 NPRIESVEEIVKAIKKVFEYVEPELL---YINPDCGMKLL 299
tr_hit_id A9SEV6
Definition tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 64
Score (bit) 81.6
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916972|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B10.
         (198 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella paten...    82   2e-14
tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genom...    75   2e-12
tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21...    65   2e-09
tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g5650...    65   2e-09
tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza ...    57   5e-07
tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis...    54   4e-06
tr|Q4RG76|Q4RG76_TETNG Chromosome 2 SCAF15106, whole genome shot...    48   3e-04
tr|Q9CW64|Q9CW64_MOUSE Putative uncharacterized protein (Fragmen...    44   0.003
tr|B2RR26|B2RR26_MOUSE NHL repeat containing 2 OS=Mus musculus G...    44   0.003
tr|B7YUI2|B7YUI2_VARPD Redoxin domain protein OS=Variovorax para...    43   0.009
tr|B5WT22|B5WT22_9BURK Redoxin domain protein OS=Burkholderia sp...    40   0.076
tr|Q7NNM4|Q7NNM4_GLOVI Gll0387 protein OS=Gloeobacter violaceus ...    38   0.22 
tr|B2IV07|B2IV07_NOSP7 Alkyl hydroperoxide reductase/ Thiol spec...    38   0.22 
tr|B8A310|B8A310_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.22 
tr|Q13LA1|Q13LA1_BURXL Putative transmembrane protein OS=Burkhol...    36   1.1  
tr|Q7Q8Q9|Q7Q8Q9_ANOGA AGAP010610-PA (Fragment) OS=Anopheles gam...    36   1.1  
tr|A6T3C2|A6T3C2_JANMA Uncharacterized conserved protein OS=Jant...    35   1.4  
tr|B2W1F1|B2W1F1_PYRTR Putative uncharacterized protein OS=Pyren...    35   1.9  
tr|B2TD60|B2TD60_BURPP Redoxin domain protein OS=Burkholderia ph...    35   2.4  
tr|A9AMI9|A9AMI9_BURM1 Redoxin domain protein (Putative uncharac...    35   2.4  
tr|B2JUY0|B2JUY0_BURP8 Redoxin domain protein OS=Burkholderia ph...    34   3.2  
tr|B1Z0N7|B1Z0N7_BURA4 Redoxin domain protein OS=Burkholderia am...    34   3.2  
tr|A4JJQ1|A4JJQ1_BURVG Redoxin domain protein OS=Burkholderia vi...    34   3.2  
tr|B1T267|B1T267_9BURK Redoxin domain protein OS=Burkholderia am...    34   3.2  
tr|B1FCD4|B1FCD4_9BURK Redoxin domain protein OS=Burkholderia am...    34   3.2  
tr|A6CB17|A6CB17_9PLAN Putative uncharacterized protein OS=Planc...    34   3.2  
tr|A2WGH5|A2WGH5_9BURK Thiol-disulfide isomerase and thioredoxin...    34   3.2  
tr|A8HUI8|A8HUI8_CHLRE Predicted protein OS=Chlamydomonas reinha...    34   3.2  
tr|A7RH97|A7RH97_NEMVE Predicted protein OS=Nematostella vectens...    34   3.2  

>tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_128572 PE=4 SV=1
          Length = 1040

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 40/64 (62%), Positives = 48/64 (75%)
 Frame = -1

Query: 192 QPSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVV 13
           QP +A+G   S+R  +F  YI D+E +  GQ VPEFQP+LEWL TAPL L+KDL GKVVV
Sbjct: 344 QPLLANG---SERVRQFKQYITDIESKYAGQVVPEFQPKLEWLNTAPLSLKKDLKGKVVV 400

Query: 12  LDFW 1
           LDFW
Sbjct: 401 LDFW 404


>tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022589001
           PE=4 SV=1
          Length = 1054

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = -1

Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1
           G +++ R  +F++YI DLE RG    VPEF  QL+WL +APL+L++DL GKVVVLDFW
Sbjct: 375 GESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPLQLRRDLKGKVVVLDFW 432


>tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21
           OS=Arabidopsis thaliana GN=F13N6.21 PE=4 SV=1
          Length = 1041

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = -1

Query: 189 PSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVL 10
           PS      E  R  +F+ YI DLE +     VPEF  +L+WL TAPL+ ++DL GKVV+L
Sbjct: 366 PSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVIL 424

Query: 9   DFW 1
           DFW
Sbjct: 425 DFW 427


>tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g56500
           OS=Arabidopsis thaliana GN=At1g56500 PE=2 SV=1
          Length = 1055

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = -1

Query: 189 PSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVL 10
           PS      E  R  +F+ YI DLE +     VPEF  +L+WL TAPL+ ++DL GKVV+L
Sbjct: 366 PSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVIL 424

Query: 9   DFW 1
           DFW
Sbjct: 425 DFW 427


>tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os03g0311300 PE=4 SV=1
          Length = 425

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 26/58 (44%), Positives = 35/58 (60%)
 Frame = -1

Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1
           G   + R  +   Y+ D E  G    VPEF  +L+WL TAPL+  +DL G+VV+LDFW
Sbjct: 64  GEQLTSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFW 121


>tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07299 PE=4 SV=1
          Length = 1103

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 26/58 (44%), Positives = 35/58 (60%)
 Frame = -1

Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1
           G   + R  +   Y+ D E  G    VPEF  +L+WL TAPL+  +DL G+VV+LDFW
Sbjct: 387 GEQLTSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFW 444


>tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030553 PE=4 SV=1
          Length = 659

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -1

Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1
           G +++ R  +F++YI DLE          F    +WL +APL+L++DL GKVVVLDFW
Sbjct: 405 GESQTGRIQQFVNYISDLES--------SFHLNFDWLNSAPLQLRRDLKGKVVVLDFW 454


>tr|Q4RG76|Q4RG76_TETNG Chromosome 2 SCAF15106, whole genome shotgun
           sequence OS=Tetraodon nigroviridis GN=GSTENG00034978001
           PE=4 SV=1
          Length = 805

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -1

Query: 135 YIEDLEKRGGGQQVPEFQPQLEWLYT-APLKLQKDLAGKVVVLDFW 1
           Y++ L+ R    ++P+FQP LEW+ T  PL L K+LAGKVV+LDF+
Sbjct: 37  YLKTLDGRDD-LKIPDFQPALEWINTEGPLSLHKELAGKVVLLDFF 81


>tr|Q9CW64|Q9CW64_MOUSE Putative uncharacterized protein (Fragment)
           OS=Mus musculus GN=Nhlrc2 PE=2 SV=1
          Length = 748

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = -1

Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1
           L+K  G +Q   VPEF   LEWL T  PL + KDL GKVVVLDF+
Sbjct: 65  LQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFF 109


>tr|B2RR26|B2RR26_MOUSE NHL repeat containing 2 OS=Mus musculus
           GN=Nhlrc2 PE=2 SV=1
          Length = 725

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = -1

Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1
           L+K  G +Q   VPEF   LEWL T  PL + KDL GKVVVLDF+
Sbjct: 42  LQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFF 86