BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916974|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B12.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q64632|ITB4_RAT Integrin beta-4 OS=Rattus norvegicus GN=Itgb4...    33   0.43 
sp|Q6PEX3|KR261_HUMAN Keratin-associated protein 26-1 OS=Homo sa...    27   1.3  
sp|Q10313|YD61_SCHPO Uncharacterized protein C17G8.01c OS=Schizo...    30   3.6  
sp|Q8IUC1|KR111_HUMAN Keratin-associated protein 11-1 OS=Homo sa...    30   4.7  
sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056 ...    29   8.0  
sp|Q2JT76|MRAY_SYNJA Phospho-N-acetylmuramoyl-pentapeptide-trans...    29   8.0  

>sp|Q64632|ITB4_RAT Integrin beta-4 OS=Rattus norvegicus GN=Itgb4 PE=2
            SV=1
          Length = 1807

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +3

Query: 183  SPPIPR*SFGSTTIVRGHGASSSIIHVRWLTSIG-DMGIPCRQWRQNDNSQSIPTPQTHA 359
            SPP+PR   G+        A S  IH  WL   G  MG   + W Q D+       + H 
Sbjct: 1121 SPPLPRGDLGAPQNPNAKAAGSRKIHFNWLPPPGKPMGYRVKYWVQGDSES-----EAHL 1175

Query: 360  LNS 368
            L+S
Sbjct: 1176 LDS 1178


>sp|Q6PEX3|KR261_HUMAN Keratin-associated protein 26-1 OS=Homo
           sapiens GN=KRTAP26-1 PE=1 SV=1
          Length = 210

 Score = 26.9 bits (58), Expect(2) = 1.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 443 CQFTCSWPTSCNPV 402
           CQ TC  PTSC PV
Sbjct: 56  CQETCGEPTSCQPV 69



 Score = 23.5 bits (49), Expect(2) = 1.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 422 PTSCNPVAYVVNGC 381
           P SC P  YV +GC
Sbjct: 109 PVSCRPQRYVSSGC 122


>sp|Q10313|YD61_SCHPO Uncharacterized protein C17G8.01c
           OS=Schizosaccharomyces pombe GN=SPAC17G8.01c PE=2 SV=2
          Length = 787

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  VQATTWQAVAQHLHSRT*LSLGSVPTRDCHLRYLDRVL 210
           V +  W+   QH+H +    +G++  R  HL + DRV+
Sbjct: 673 VNSRIWEQYLQHMHDKNTTKMGNISFRITHLVWDDRVI 710


>sp|Q8IUC1|KR111_HUMAN Keratin-associated protein 11-1 OS=Homo
           sapiens GN=KRTAP11-1 PE=1 SV=1
          Length = 163

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = -1

Query: 443 CQFTCSWPTSCNPVAYVVNGCNYWM*VEGVCLWSGYRLAVVILSPLST 300
           CQ TC  PT+C P  Y    C     V   C  +  R    I +P ST
Sbjct: 56  CQETCCEPTACQPTCYRRTSC-----VSNPCQVTCSRQTTCISNPCST 98


>sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056
            OS=Dictyostelium discoideum GN=DDB_G0292056 PE=4 SV=1
          Length = 1823

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 364  LRACVCGVGIDWLLSFCLHCRHG 296
            ++  +C + +  L SFCL+C HG
Sbjct: 1617 VKCSICNISVRGLSSFCLYCGHG 1639


>sp|Q2JT76|MRAY_SYNJA
           Phospho-N-acetylmuramoyl-pentapeptide-transferase
           OS=Synechococcus sp. (strain JA-3-3Ab) GN=mraY PE=3 SV=1
          Length = 340

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 421 LHHATQLLTWSMVAIIGC--ELRACVCGVGIDW 329
           LHH  +L  WS V ++GC   L A + G+G  W
Sbjct: 302 LHHHLELGGWSEVQVVGCFYGLTALLVGLGWAW 334

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916974|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_B12.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5AX06|Q5AX06_EMENI Putative uncharacterized protein OS=Emeri...    33   9.4  

>tr|Q5AX06|Q5AX06_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN7174.2 PE=4 SV=1
          Length = 305

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 37  ELYQIDEICPCGKLPSITFIVQATTWQAVAQHLHSRT*LSLGSVPTRDCHLRYLDR 204
           +LYQ+ E  P GK        Q   W  +A+H+  RT         +DC  RY +R
Sbjct: 18  DLYQVQEKAPTGK-------CQKINWNEIARHIPGRT--------NKDCRKRYYNR 58