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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916980
Clone id YMU001_000094_C06
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATGTCCTTGCCACTACCAAAGGCACTTGTGGATAAAGATTATTCCATCAAAGCCGACCAC
AAAATTCAAGCATCCCCTCGCTAAGCCTTTGCTTTTAATTTACCTTATCTAGAGCATGTT
GAATCTTCACAAAATAGCTCTAGTTTGAATACCAAGGGACAGCATAACCTGCAGATTGGC
CCTGTATAATCTCTGTCATCTAATCAATAAGCGGTCGCTCCTCAAACCCCAACAAATGAG
ATACATCTCTAGGAGCCATGAGGAAGAACGAGTCTGTGACGTATTGGTCCGATGTAGAAC
TAAGGTAACAGGGAGAAGCCATCTGGTCAATGAATCCATCCACACCAGTCAAACAAGTCT
TTGGCTAGCTCACCCATCCAAGAGTACAATTCACCTCGAACCTCGTCAAAGACAGCGCCA
CATATGTCATCGCTCTCATCTGTCACAAATCTGCTGAAGACACAGTAAACCTGTAAAAAG
GTCCTTTTCCAATGAAGTGTGGCCCTCTCCTCCTGGAATCCTATAAGAGGTAGA
■■Homology search results ■■ -
sp_hit_id Q68DN1
Definition sp|Q68DN1|CB016_HUMAN Uncharacterized protein C2orf16 OS=Homo sapiens
Align length 99
Score (bit) 31.2
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916980|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_C06.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68DN1|CB016_HUMAN Uncharacterized protein C2orf16 OS=Homo sa...    31   3.3  
sp|Q6C030|DPB2_YARLI DNA polymerase epsilon subunit B OS=Yarrowi...    31   4.3  

>sp|Q68DN1|CB016_HUMAN Uncharacterized protein C2orf16 OS=Homo sapiens
            GN=C2orf16 PE=1 SV=2
          Length = 1984

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +2

Query: 194  CHLINKRSLLKPQQMRYISRSHEEERVCDVLVRCRTKVTGRSHLVN-ESIHTSQTSLWLA 370
            CH +++R L  P Q  +  R   + R      R     + RSH  + E  H S +     
Sbjct: 1622 CHSLSERGLHSPSQRSH--RGPSQRRHHSPSERSHRSPSERSHRSSSERRHRSPSQRSHR 1679

Query: 371  HPSKSTIHLEPRQRQ-RHICHRSHLSQIC*RHSKPVKRS 484
             PS+ + H  P +R+ R    RSH      RH  P KRS
Sbjct: 1680 GPSERS-HCSPSERRHRSPSQRSHRGPSERRHHSPSKRS 1717


>sp|Q6C030|DPB2_YARLI DNA polymerase epsilon subunit B OS=Yarrowia
           lipolytica GN=DPB2 PE=3 SV=1
          Length = 652

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 383 STIHLEPRQRQRHICHRSHLSQIC*RHSKPVKRSFSNEVWPSP-PGIL 523
           S   +E R+  R IC + HLS    RH +PV   +   +W SP P IL
Sbjct: 556 SAKEVESRKIVRTICDQGHLSPFN-RHDRPVAWDYDETLWLSPLPTIL 602
tr_hit_id Q4P4N2
Definition tr|Q4P4N2|Q4P4N2_USTMA Putative uncharacterized protein OS=Ustilago maydis
Align length 81
Score (bit) 34.7
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916980|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_C06.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4P4N2|Q4P4N2_USTMA Putative uncharacterized protein OS=Ustil...    35   3.2  
tr|B2VVQ5|B2VVQ5_PYRTR Cephalosporin C regulator 1 OS=Pyrenophor...    35   3.2  
tr|A1CF23|A1CF23_ASPCL Putative uncharacterized protein OS=Asper...    33   7.2  

>tr|Q4P4N2|Q4P4N2_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM04931.1 PE=4 SV=1
          Length = 1302

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +2

Query: 191 LCHLINKRSLLKPQQMRYISRSHEEERVCDVLVRCRTKVTGRSHLVNESIHTSQTSLWLA 370
           LCHL+    + KP + R +         C +L RC           ++S+H +  +LW  
Sbjct: 56  LCHLL----ITKPSESRALE--------CFILRRC-----------SQSVHVALLTLWYF 92

Query: 371 HPSKSTIHLEPRQRQRHICHR 433
             + S +   P     H+CHR
Sbjct: 93  QAALSDLSSNPHTASFHVCHR 113


>tr|B2VVQ5|B2VVQ5_PYRTR Cephalosporin C regulator 1 OS=Pyrenophora
           tritici-repentis (strain Pt-1C-BFP) GN=PTRG_01267 PE=4
           SV=1
          Length = 833

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = +2

Query: 212 RSLLKPQQMRYISRSHEEERVCDVLVRCRTKVTGRSHLVNESIHTSQTSLWLAHPSKSTI 391
           RS   PQQ +Y +     E +   L++   +V+ + HL+N S+ + Q   +L +P++S  
Sbjct: 42  RSAQFPQQPQYHAPFTTSEALQPALIQAAQQVSAQDHLINMSLESVQQ--YLGYPAESNT 99

Query: 392 HLE-----PRQRQRHICHRSHLSQ 448
           +       P Q+  H  H S LSQ
Sbjct: 100 NQPQHSGLPAQQHHHAYHNS-LSQ 122


>tr|A1CF23|A1CF23_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_091700 PE=4 SV=1
          Length = 176

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 103 PYLEHVESSQNSSSLNTKGQHNLQIGPV*SLSSNQ*AVAPQTPTNE 240
           PYLEH    +  SSL+  G  N   G     S NQ +  P+ PTN+
Sbjct: 6   PYLEHPPKRKRESSLSQSGPANESRGAKPIESPNQDSTQPEPPTND 51