BP916983 |
Clone id |
YMU001_000094_C10 |
Library |
YMU01 |
Length |
329 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_C10. |
Accession |
BP916983 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2776Contig1 |
Sequence |
TTATATCCAGATTATCGACTCTCTAGAGCCTAGGTGGTGCTTTTTCTTTCGGCGGGACCT TCAAACATTTTGGCCTAGCAGCTCCATGATAAAAGTAGCTAATAATTTTTAAAAGGTCAT CTGCAGTTAAGTATCCTGACTGATAGTGTATCAACTTTTGTCCCTTGATAAACAGAAGTG TTGGAATTTCTTTGATTCCTATCGCGCCAACAAGATCCTCCTCAAAAGATGCATGTATTT TTACAAGCCGGGGAGGCAATCGTCTGGTTTCCCACATACGATTAGCAGTATCCTCCAGCT CTCGAAGCACATGATAACACTCACGACCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q63081 |
Definition |
sp|Q63081|PDIA6_RAT Protein disulfide-isomerase A6 OS=Rattus norvegicus |
Align length |
89 |
Score (bit) |
35.8 |
E-value |
0.069 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5QLS7 |
Definition |
tr|Q5QLS7|Q5QLS7_ORYSJ cDNA clone:J013002F09, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
93 |
Score (bit) |
82.8 |
E-value |
8.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916983|Adiantum capillus-veneris mRNA, clone: YMU001_000094_C10. (329 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5QLS7|Q5QLS7_ORYSJ cDNA clone:J013002F09, full insert sequen... 83 8e-15 tr|A7Q1P7|A7Q1P7_VITVI Chromosome chr7 scaffold_44, whole genome... 79 9e-14 tr|B6TC88|B6TC88_MAIZE Thioredoxin family protein OS=Zea mays PE... 76 9e-13 tr|Q67XP3|Q67XP3_ARATH Putative uncharacterized protein At4g2859... 75 2e-12 tr|A9P058|A9P058_PICSI Putative uncharacterized protein OS=Picea... 74 5e-12 tr|A2ZZ71|A2ZZ71_ORYSJ Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A2Z5H3|A2Z5H3_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A7QB17|A7QB17_VITVI Chromosome chr5 scaffold_72, whole genome... 72 1e-11 tr|A5ALM5|A5ALM5_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|Q9SKB6|Q9SKB6_ARATH Putative uncharacterized protein At2g3184... 69 9e-11 tr|Q84RF5|Q84RF5_ARATH Putative uncharacterized protein At2g3184... 67 4e-10 tr|Q6AT71|Q6AT71_ORYSJ cDNA clone:J013081M10, full insert sequen... 55 1e-06 tr|Q0DI48|Q0DI48_ORYSJ Os05g0417200 protein OS=Oryza sativa subs... 55 1e-06 tr|A2Y4Q4|A2Y4Q4_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A9TWS6|A9TWS6_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06 tr|Q9M0H2|Q9M0H2_ARATH Putative uncharacterized protein AT4g2859... 52 2e-05 tr|B4FN47|B4FN47_MAIZE Putative uncharacterized protein OS=Zea m... 51 3e-05 tr|B6T6S0|B6T6S0_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04 tr|Q2KZZ7|Q2KZZ7_BORA1 Thioredoxin 2 OS=Bordetella avium (strain... 40 0.044 tr|A9IP21|A9IP21_BORPD Thioredoxin OS=Bordetella petrii (strain ... 40 0.044 tr|A3J6S1|A3J6S1_9FLAO Thioredoxin C-2 OS=Flavobacteria bacteriu... 40 0.044 tr|Q7WI31|Q7WI31_BORBR Thioredoxin 2 OS=Bordetella bronchiseptic... 39 0.098 tr|Q7VXN6|Q7VXN6_BORPE Thioredoxin 2 OS=Bordetella pertussis GN=... 39 0.098 tr|Q03JC0|Q03JC0_STRTD N-(5'-phosphoribosyl)anthranilate isomera... 39 0.17 tr|Q9X0M6|Q9X0M6_THEMA Putative uncharacterized protein OS=Therm... 38 0.22 tr|B1LCU5|B1LCU5_THESQ Thioredoxin-related protein-like protein ... 38 0.22 tr|A7HLC3|A7HLC3_FERNB Thioredoxin-related protein-like protein ... 38 0.22 tr|A5IN36|A5IN36_THEP1 Thioredoxin-related protein-like protein ... 38 0.22 tr|Q4FF19|Q4FF19_THESQ Putative uncharacterized protein (Fragmen... 38 0.22 tr|B7RCW6|B7RCW6_9THEM Putative uncharacterized protein OS=Marin... 38 0.22
>tr|Q5QLS7|Q5QLS7_ORYSJ cDNA clone:J013002F09, full insert sequence OS=Oryza sativa subsp. japonica GN=B1088C09.28 PE=2 SV=1 Length = 317
Score = 82.8 bits (203), Expect = 8e-15 Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 1/93 (1%) Frame = -2
Query: 307 LRELEDTANRMWETR-RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGY 131 L+ELE A W ++ RLPPR VK+ + E DL A+ +KE P LLF++G K+++ + Sbjct: 226 LQELEKAAKVYWNSKDRLPPRTVKVDMNIERDLAFALQVKECPQLLFLRGNKILYREKEL 285
Query: 130 LTADDLLKIISYFYHGAARPKCLKVPPKEKAPP 32 TAD+L+++I++FY+ A RP C V P+ APP Sbjct: 286 RTADELVQMIAHFYYNAKRPSC--VNPEAIAPP 316
>tr|A7Q1P7|A7Q1P7_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028550001 PE=4 SV=1 Length = 326
Score = 79.3 bits (194), Expect = 9e-14 Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -2
Query: 316 YHVLRELEDTANRMWETR-RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQ 140 + VL+ELE A W + RLPPR VKI + E D+ A+ KE P +LF++G ++++ + Sbjct: 233 WKVLKELEKAAKVYWSAKDRLPPRTVKIDINIERDMAYALQAKECPQILFLRGNRILYRE 292
Query: 139 SGYLTADDLLKIISYFYHGAARPKCL 62 + TAD+L+ +I+YFY+ A +P C+ Sbjct: 293 KDFRTADELVHMIAYFYYNAKKPSCI 318
>tr|B6TC88|B6TC88_MAIZE Thioredoxin family protein OS=Zea mays PE=2 SV=1 Length = 327
Score = 75.9 bits (185), Expect = 9e-13 Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%) Frame = -2
Query: 307 LRELEDTANRMWETR-RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGY 131 L+ELE A W + RLPPR VK+ + E DL A+ +E P LLF++G K+++ + Sbjct: 237 LQELEKAAKVYWNAKDRLPPRTVKVDINIERDLAYALQARECPQLLFLRGNKILYREKEI 296
Query: 130 LTADDLLKIISYFYHGAARPKCL 62 TAD+L+++I++FY+ A RP C+ Sbjct: 297 RTADELVQMIAHFYYNAKRPSCV 319
>tr|Q67XP3|Q67XP3_ARATH Putative uncharacterized protein At4g28590 (Fragment) OS=Arabidopsis thaliana GN=At4g28590 PE=2 SV=1 Length = 327
Score = 75.1 bits (183), Expect = 2e-12 Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Frame = -2
Query: 316 YHVLRELEDTANRMWETR-RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQ 140 + L+ELE W+ + RLPPR VKI + E DL A+ KE P +LF++G ++++ + Sbjct: 233 WKTLKELEKAIKVYWDAKDRLPPRAVKIDLNIETDLAYALKAKECPQILFLRGNRILYRE 292
Query: 139 SGYLTADDLLKIISYFYHGAARPKCL 62 + TAD+L+ +I++FY+ A RP C+ Sbjct: 293 KDFRTADELVHMIAHFYYKAKRPSCV 318
>tr|A9P058|A9P058_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 359
Score = 73.6 bits (179), Expect = 5e-12 Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = -2
Query: 316 YHVLRELEDTANRMWETR-RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQ 140 + L+ELE WE+ +LPPR VKI A E DL A+ +K P +LFI+G KL++ + Sbjct: 264 WKALKELEKAFQVYWESHNKLPPRTVKIDAKIERDLASALRVKGTPEILFIRGGKLLYRE 323
Query: 139 SGYLTADDLLKIISYFYHGAARPKCLK 59 + TA++L+++I++FY+ A RP L+ Sbjct: 324 TEVRTANELVQMIAHFYYNAKRPTWLR 350
>tr|A2ZZ71|A2ZZ71_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003843 PE=4 SV=1 Length = 332
Score = 73.6 bits (179), Expect = 5e-12 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 16/108 (14%) Frame = -2
Query: 307 LRELEDTANRMWETR-RLPPRL---------------VKIHASFEEDLVGAIGIKEIPTL 176 L+ELE A W ++ RLPPR+ VK+ + E DL A+ +KE P L Sbjct: 226 LQELEKAAKVYWNSKDRLPPRVIEVVGHMLNLIEFQTVKVDMNIERDLAFALQVKECPQL 285
Query: 175 LFIKGQKLIHYQSGYLTADDLLKIISYFYHGAARPKCLKVPPKEKAPP 32 LF++G K+++ + TAD+L+++I++FY+ A RP C V P+ APP Sbjct: 286 LFLRGNKILYREKELRTADELVQMIAHFYYNAKRPSC--VNPEAIAPP 331
>tr|A2Z5H3|A2Z5H3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32898 PE=4 SV=1 Length = 332
Score = 73.6 bits (179), Expect = 5e-12 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 16/108 (14%) Frame = -2
Query: 307 LRELEDTANRMWETR-RLPPRL---------------VKIHASFEEDLVGAIGIKEIPTL 176 L+ELE A W ++ RLPPR+ VK+ + E DL A+ +KE P L Sbjct: 226 LQELEKAAKVYWNSKDRLPPRVIEVVGHMLNLIEFQTVKVDMNIERDLAFALQVKECPQL 285
Query: 175 LFIKGQKLIHYQSGYLTADDLLKIISYFYHGAARPKCLKVPPKEKAPP 32 LF++G K+++ + TAD+L+++I++FY+ A RP C V P+ APP Sbjct: 286 LFLRGNKILYREKELRTADELVQMIAHFYYNAKRPSC--VNPEAIAPP 331
>tr|A7QB17|A7QB17_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034767001 PE=4 SV=1 Length = 239
Score = 72.0 bits (175), Expect = 1e-11 Identities = 35/88 (39%), Positives = 52/88 (59%) Frame = -2
Query: 325 RECYHVLRELEDTANRMWETRRLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIH 146 +E + ELE + +W R PR V I A E DLV A+ + P ++F K K++H Sbjct: 135 KENQKIREELEKAVHIIWNCRLPSPRCVAIDAVVEVDLVSALQVSVFPEVIFTKAGKILH 194
Query: 145 YQSGYLTADDLLKIISYFYHGAARPKCL 62 + TAD+L KI+++FY+GAA+P CL Sbjct: 195 REKVIQTADELSKIMAFFYYGAAKPPCL 222
>tr|A5ALM5|A5ALM5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004630 PE=4 SV=1 Length = 324
Score = 72.0 bits (175), Expect = 1e-11 Identities = 35/88 (39%), Positives = 52/88 (59%) Frame = -2
Query: 325 RECYHVLRELEDTANRMWETRRLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIH 146 +E + ELE + +W R PR V I A E DLV A+ + P ++F K K++H Sbjct: 220 KENQKIREELEKAVHIIWNCRLPSPRCVAIDAVVEVDLVSALQVSVFPEVIFTKAGKILH 279
Query: 145 YQSGYLTADDLLKIISYFYHGAARPKCL 62 + TAD+L KI+++FY+GAA+P CL Sbjct: 280 REKVIQTADELSKIMAFFYYGAAKPPCL 307
>tr|Q9SKB6|Q9SKB6_ARATH Putative uncharacterized protein At2g31840 OS=Arabidopsis thaliana GN=At2g31840 PE=2 SV=1 Length = 350
Score = 69.3 bits (168), Expect = 9e-11 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%) Frame = -2
Query: 301 ELEDTANRMWETRRLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTA 122 ELE +W PR V + A E DLV A+ + P ++F K K+++ + G TA Sbjct: 253 ELEKAIQVIWNCGLPSPRCVAVDAVVETDLVSALKVSVFPEIIFTKAGKILYREKGIRTA 312
Query: 121 DDLLKIISYFYHGAARPKCLK--VPPKEKAP 35 D+L KI+++FY+GAA+P CL V +E+ P Sbjct: 313 DELSKIMAFFYYGAAKPPCLNGVVNSQEQIP 343
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