BP916990 |
Clone id |
YMU001_000094_D07 |
Library |
YMU01 |
Length |
451 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_D07. |
Accession |
BP916990 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCAAATTTGAATTGCTTCTGCCACTGCACCATTCTGATTTCGTAAAAAAGCTGCCATCGA AAGTGTCCACTTTCGCAGTCTTGTTTCACTGATACCTAAGCGTATTGTACATTCTATGTC AACTGCTCTAAGTGGGTAGCATTTTGGCATTTTGATTATCATGTCCATACCAGCTTCCTC TTTCTTATAAACGACTATCACTTCACCAAGACCTTGATTTGCTTTAATCGACAAGCTGTC ATCTGCAACAGTAGAGTTATGCACCTGAGCAAATTCATCAGCCAGTAATAGGGGGCTGCA GAACTTGGTTGTAAAAGACTCCACAGAAATAGCAGCAGATCGGTCTCGTAAGCCTGTAAA CCATACTCGTACACAAGCCGGCAGCACTTGTAATAACAATCCGTATAGACCAGCAGCCAA AGATGATACGGTGTCCTCCTCTATTGGCCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6A009 |
Definition |
sp|Q6A009|ZN294_MOUSE Zinc finger protein 294 OS=Mus musculus |
Align length |
127 |
Score (bit) |
84.7 |
E-value |
2.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S0A5 |
Definition |
tr|A9S0A5|A9S0A5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
150 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916990|Adiantum capillus-veneris mRNA, clone: YMU001_000094_D07. (451 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S0A5|A9S0A5_PHYPA Predicted protein OS=Physcomitrella paten... 191 2e-47 tr|Q5JNB3|Q5JNB3_ORYSJ Zinc finger protein-like (Os01g0977600 pr... 166 4e-40 tr|B8AA81|B8AA81_ORYSI Putative uncharacterized protein OS=Oryza... 166 4e-40 tr|A3A234|A3A234_ORYSJ Putative uncharacterized protein OS=Oryza... 166 4e-40 tr|A7NY51|A7NY51_VITVI Chromosome chr6 scaffold_3, whole genome ... 152 8e-36 tr|Q9FGI1|Q9FGI1_ARATH Genomic DNA, chromosome 5, P1 clone:MQJ2 ... 140 2e-32 tr|A8HYJ6|A8HYJ6_CHLRE Predicted protein OS=Chlamydomonas reinha... 105 1e-21 tr|Q00T84|Q00T84_OSTTA Predicted E3 ubiquitin ligase (ISS) OS=Os... 99 1e-19 tr|A4S9C1|A4S9C1_OSTLU Predicted protein OS=Ostreococcus lucimar... 97 5e-19 tr|Q4SFV1|Q4SFV1_TETNG Chromosome 7 SCAF14601, whole genome shot... 94 3e-18 tr|Q52KU8|Q52KU8_XENLA LOC733217 protein (Fragment) OS=Xenopus l... 94 4e-18 tr|A2VD60|A2VD60_XENLA Putative uncharacterized protein (Fragmen... 94 4e-18 tr|A7RPD8|A7RPD8_NEMVE Predicted protein OS=Nematostella vectens... 92 1e-17 tr|Q6C4G2|Q6C4G2_YARLI YALI0E27049p OS=Yarrowia lipolytica GN=YA... 92 1e-17 tr|A0JM49|A0JM49_XENTR Zinc finger protein 294 OS=Xenopus tropic... 91 2e-17 tr|A5DD93|A5DD93_PICGU Putative uncharacterized protein OS=Pichi... 90 6e-17 tr|A8PTC6|A8PTC6_MALGO Putative uncharacterized protein OS=Malas... 89 1e-16 tr|Q6BNW5|Q6BNW5_DEBHA DEHA2E18480p OS=Debaryomyces hansenii GN=... 88 2e-16 tr|A3LZR0|A3LZR0_PICST Predicted protein (Fragment) OS=Pichia st... 88 2e-16 tr|Q2KI81|Q2KI81_BOVIN ZNF294 protein (Fragment) OS=Bos taurus G... 86 7e-16 tr|Q5RJS4|Q5RJS4_RAT Zfp294 protein OS=Rattus norvegicus GN=Znf2... 84 5e-15 tr|Q4PH01|Q4PH01_USTMA Putative uncharacterized protein OS=Ustil... 82 1e-14 tr|B6N2U1|B6N2U1_BRAFL Putative uncharacterized protein OS=Branc... 82 2e-14 tr|A5DRR1|A5DRR1_LODEL Putative uncharacterized protein OS=Lodde... 82 2e-14 tr|B5VQ16|B5VQ16_YEAS6 YMR247Cp-like protein (Fragment) OS=Sacch... 81 2e-14 tr|B3LMD6|B3LMD6_YEAS1 Putative uncharacterized protein OS=Sacch... 81 2e-14 tr|A7TP87|A7TP87_VANPO Putative uncharacterized protein OS=Vande... 81 2e-14 tr|A6ZMW1|A6ZMW1_YEAS7 Ring domain mutant killed by rtf1 deletio... 81 2e-14 tr|Q6FS84|Q6FS84_CANGA Similar to uniprot|Q04781 Saccharomyces c... 80 4e-14 tr|B7PSL8|B7PSL8_IXOSC Putative uncharacterized protein OS=Ixode... 80 7e-14
>tr|A9S0A5|A9S0A5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162093 PE=4 SV=1 Length = 1879
Score = 191 bits (484), Expect = 2e-47 Identities = 92/150 (61%), Positives = 115/150 (76%) Frame = -2
Query: 450 WPIEEDTXXXXXXXXXXXXXXXLPACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEF 271 WP++E++ LPACVR+WFTGLRDRS A ++E+FT+ CS LLADEF Sbjct: 1676 WPVKEESLVILAGAIYGLLIRVLPACVRIWFTGLRDRSTASAIENFTSSNCSTQLLADEF 1735
Query: 270 AQVHNSTVADDSLSIKANQGLGEVIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGI 91 Q+ S V DD+LSI+AN+ L EVI VYKKEEA +D++I++P CYPLRAV+++CT RLGI Sbjct: 1736 LQLQASVVPDDTLSIRANRTLREVIAVYKKEEACLDIVIRLPSCYPLRAVEVDCTRRLGI 1795
Query: 90 SETRLRKWTLSMAAFLRNQNGAVAEAIQIW 1 SET LRKW LSMAAFLRNQNGA+ EAIQ+W Sbjct: 1796 SETLLRKWILSMAAFLRNQNGAMLEAIQMW 1825
>tr|Q5JNB3|Q5JNB3_ORYSJ Zinc finger protein-like (Os01g0977600 protein) OS=Oryza sativa subsp. japonica GN=P0020E09.22-1 PE=4 SV=1 Length = 1921
Score = 166 bits (421), Expect = 4e-40 Identities = 75/127 (59%), Positives = 96/127 (75%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADDSLSIKANQGLGE 202 P+ VR WFT LRDRS + S+ESFT +CSP LL DEF+QV +S ADD+ S+ N+ E Sbjct: 1731 PSYVRTWFTSLRDRSLSSSIESFTRAWCSPPLLLDEFSQVKDSLYADDNFSVSVNRSAYE 1790
Query: 201 VIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQNGAV 22 ++ YKKEE G+D++I++P CYPLR VD+ECT LGISE + RKW LS+ AF+RNQNGA+ Sbjct: 1791 IVATYKKEETGIDLVIRLPSCYPLRHVDVECTRSLGISEVKCRKWLLSLTAFVRNQNGAI 1850
Query: 21 AEAIQIW 1 AEAI W Sbjct: 1851 AEAIHTW 1857
>tr|B8AA81|B8AA81_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05440 PE=4 SV=1 Length = 1754
Score = 166 bits (421), Expect = 4e-40 Identities = 75/127 (59%), Positives = 96/127 (75%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADDSLSIKANQGLGE 202 P+ VR WFT LRDRS + S+ESFT +CSP LL DEF+QV +S ADD+ S+ N+ E Sbjct: 1564 PSYVRTWFTSLRDRSLSSSIESFTRAWCSPPLLLDEFSQVKDSLYADDNFSVSVNRSAYE 1623
Query: 201 VIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQNGAV 22 ++ YKKEE G+D++I++P CYPLR VD+ECT LGISE + RKW LS+ AF+RNQNGA+ Sbjct: 1624 IVATYKKEETGIDLVIRLPSCYPLRHVDVECTRSLGISEVKCRKWLLSLTAFVRNQNGAI 1683
Query: 21 AEAIQIW 1 AEAI W Sbjct: 1684 AEAIHTW 1690
>tr|A3A234|A3A234_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004856 PE=4 SV=1 Length = 1888
Score = 166 bits (421), Expect = 4e-40 Identities = 75/127 (59%), Positives = 96/127 (75%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADDSLSIKANQGLGE 202 P+ VR WFT LRDRS + S+ESFT +CSP LL DEF+QV +S ADD+ S+ N+ E Sbjct: 1698 PSYVRTWFTSLRDRSLSSSIESFTRAWCSPPLLLDEFSQVKDSLYADDNFSVSVNRSAYE 1757
Query: 201 VIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQNGAV 22 ++ YKKEE G+D++I++P CYPLR VD+ECT LGISE + RKW LS+ AF+RNQNGA+ Sbjct: 1758 IVATYKKEETGIDLVIRLPSCYPLRHVDVECTRSLGISEVKCRKWLLSLTAFVRNQNGAI 1817
Query: 21 AEAIQIW 1 AEAI W Sbjct: 1818 AEAIHTW 1824
>tr|A7NY51|A7NY51_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023986001 PE=4 SV=1 Length = 1814
Score = 152 bits (384), Expect = 8e-36 Identities = 67/127 (52%), Positives = 96/127 (75%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADDSLSIKANQGLGE 202 PA VR WF+ LRDRSA+ +E FT +CSP L+ADE +Q+ ++ AD++ S+ ++ E Sbjct: 1624 PAYVRQWFSDLRDRSASSLIEYFTKAWCSPPLIADELSQIKKASFADENFSVSVSKSANE 1683
Query: 201 VIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQNGAV 22 V+ Y K+E GMD++I++P YPLR+VD++CT LGISE + RKW +SM +F+RNQNGA+ Sbjct: 1684 VVATYTKDETGMDLVIRLPPSYPLRSVDVDCTRSLGISEVKQRKWLMSMTSFVRNQNGAL 1743
Query: 21 AEAIQIW 1 AEAI+IW Sbjct: 1744 AEAIRIW 1750
>tr|Q9FGI1|Q9FGI1_ARATH Genomic DNA, chromosome 5, P1 clone:MQJ2 OS=Arabidopsis thaliana GN=At5g58410 PE=4 SV=1 Length = 1873
Score = 140 bits (354), Expect = 2e-32 Identities = 65/150 (43%), Positives = 95/150 (63%) Frame = -2
Query: 450 WPIEEDTXXXXXXXXXXXXXXXLPACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEF 271 WPIE LPA VR WF+ +RDRSA+ +E+FT +CSP L+ +E Sbjct: 1660 WPIETGKMASLAGAIYGLMLRVLPAYVREWFSEMRDRSASSLIEAFTRTWCSPSLIKNEL 1719
Query: 270 AQVHNSTVADDSLSIKANQGLGEVIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGI 91 +Q+ + D+S S+ ++ EV+ Y K+E GMD++I++P YPL+ VD+ C +GI Sbjct: 1720 SQIKKADFNDESFSVSISKAANEVVATYTKDETGMDLVIRLPVSYPLKPVDVNCAKSIGI 1779
Query: 90 SETRLRKWTLSMAAFLRNQNGAVAEAIQIW 1 SE + RKW +SM F+R+QNGA+AEAI+IW Sbjct: 1780 SEAKQRKWLMSMQMFVRHQNGALAEAIRIW 1809
>tr|A8HYJ6|A8HYJ6_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_142457 PE=4 SV=1 Length = 936
Score = 105 bits (262), Expect = 1e-21 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 7/134 (5%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHN------STVADDSLSIKA 220 PA R WF LRDR A +VE++T P LLA E V ++ +D S++ Sbjct: 739 PATARGWFGDLRDRGLAAAVEAYTAAAEGPALLAAEMEAVQALGKGAATSDSDSKFSVRC 798
Query: 219 NQGLGEVIVVYKKEE-AGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFL 43 + EV+ V + E+ A +++ +++P C PLRA ++EC ++G++E RLRKW LS++ FL Sbjct: 799 SAAAREVVAVLEVEDGAVLELAVRLPACMPLRAPEVECRRKVGVNEGRLRKWLLSISTFL 858
Query: 42 RNQNGAVAEAIQIW 1 R+QNG+VA+AI +W Sbjct: 859 RHQNGSVADAICLW 872
>tr|Q00T84|Q00T84_OSTTA Predicted E3 ubiquitin ligase (ISS) OS=Ostreococcus tauri GN=Ot17g02050 PE=4 SV=1 Length = 1680
Score = 98.6 bits (244), Expect = 1e-19 Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 3/130 (2%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADD---SLSIKANQG 211 PA VR + + ++ + A +E+ T SP L+ADEF V T D SL++K + Sbjct: 1482 PASVRTFVSDMKPQRDAKLLEAATAATVSPALIADEFRAVSAMTFTSDGSGSLTVKPSVN 1541
Query: 210 LGEVIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQN 31 EV+ Y+ +E+ + + +K+P YPL ++ C R+G+SE RLRKW L ++A L++QN Sbjct: 1542 TREVLTTYEIDESSLQLAVKLPNSYPLAPAELVCAERVGVSEARLRKWMLGISAILKHQN 1601
Query: 30 GAVAEAIQIW 1 GAVA+ + W Sbjct: 1602 GAVAQGLLQW 1611
>tr|A4S9C1|A4S9C1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_18578 PE=4 SV=1 Length = 1744
Score = 96.7 bits (239), Expect = 5e-19 Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 3/130 (2%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADD---SLSIKANQG 211 PA VR + + ++ + A +E T+ SP L+A EF V T A D SL++K + Sbjct: 1546 PASVRAFVSDMKPQRDAKRLEGATSATVSPTLIAAEFKAVSAMTFAGDGTGSLTVKPSIA 1605
Query: 210 LGEVIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQN 31 E + Y+ +E+ +++ +++P YPL ++ C R+GISE RLRKW L ++A L++QN Sbjct: 1606 TREFLTTYEIDESSLELTVRLPNAYPLAPAELVCAKRVGISEARLRKWMLGISAILKHQN 1665
Query: 30 GAVAEAIQIW 1 GAVA+A+ W Sbjct: 1666 GAVAQALLQW 1675
>tr|Q4SFV1|Q4SFV1_TETNG Chromosome 7 SCAF14601, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00018943001 PE=4 SV=1 Length = 1818
Score = 94.4 bits (233), Expect = 3e-18 Identities = 43/127 (33%), Positives = 77/127 (60%) Frame = -2
Query: 381 PACVRVWFTGLRDRSAAISVESFTTKFCSPLLLADEFAQVHNSTVADDSLSIKANQGLGE 202 PA VR+W+ R + + VE FT K+ SP+L A E + V S DS+++KA E Sbjct: 1628 PAMVRLWWNSQEKRVSTV-VEKFTVKYISPVLSAQEISSVQLSDQLSDSMAVKARSAARE 1686
Query: 201 VIVVYKKEEAGMDMIIKMPKCYPLRAVDIECTIRLGISETRLRKWTLSMAAFLRNQNGAV 22 VI Y ++ ++++I++P+ YPL ++ ++ R+GI+ + R W L ++ +L +QNG++ Sbjct: 1687 VIATYSVDDIFIELVIQLPQNYPLGSIAVDSGRRVGIALQQWRNWMLQLSTYLTHQNGSI 1746
Query: 21 AEAIQIW 1 E + +W Sbjct: 1747 MEGLTLW 1753
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