BP916997 |
Clone id |
YMU001_000094_E05 |
Library |
YMU01 |
Length |
423 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_E05. |
Accession |
BP916997 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2369Contig1 |
Sequence |
GCAGGTGGTCGCGTGATAGCTTGGAAGGGATATAGGGTGGGAGCTCTGTTGGCTGTATCG CGTGCTATAGGTGATCGCTATCTAAAGCGTTATGTCATTTCTGAACCGGATGTGGTTTGT TTCGAACGCACCGATGAGGACGAGTGCCTAATACTTGCAAGTGATGGTTTATGGGATGTG ATTGATAATGATACTGCTTGTGATGTGGCTCGGAGATGTTTGGCCTCTGCTCGTGGTCGT GAACGACGCCGCACATCGCGAGGAGAGGATTTTGCGTCTGCTACAGCCGCATCTACCTTG GTGAAACTAGCTTGTGGCGAGGGAAGCCAAGACAATATCACTGTGGTGGTGGTCGATTTG AGCCGCAGACAGCAATGAAACTTTTTTGCTCACATGGTCTATCGTGAAAAGCTTGCCATT CTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5SN75 |
Definition |
sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica |
Align length |
122 |
Score (bit) |
121.0 |
E-value |
1.0e-27 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1B5N6 |
Definition |
tr|B1B5N6|B1B5N6_PHYPA Protein phosphatase 2C OS=Physcomitrella patens |
Align length |
120 |
Score (bit) |
134.0 |
E-value |
3.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916997|Adiantum capillus-veneris mRNA, clone: YMU001_000094_E05. (423 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B1B5N6|B1B5N6_PHYPA Protein phosphatase 2C OS=Physcomitrella ... 134 3e-30 tr|A9SHN9|A9SHN9_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 3e-30 tr|B1B5N7|B1B5N7_PHYPA Protein phosphatase 2C OS=Physcomitrella ... 133 5e-30 tr|A9TT55|A9TT55_PHYPA Predicted protein (Fragment) OS=Physcomit... 133 5e-30 tr|B8A6V5|B8A6V5_ORYSI Putative uncharacterized protein OS=Oryza... 121 1e-26 tr|A2ZW56|A2ZW56_ORYSJ Putative uncharacterized protein OS=Oryza... 121 1e-26 tr|A9PFK6|A9PFK6_POPTR Putative uncharacterized protein OS=Popul... 120 4e-26 tr|Q9M3V1|Q9M3V1_FAGSY Protein phpsphatase 2C (PP2C) OS=Fagus sy... 119 1e-25 tr|Q71QD5|Q71QD5_PRUAV Protein phosphatase 2C OS=Prunus avium GN... 118 1e-25 tr|Q76BK7|Q76BK7_TOBAC Protein phosphatase 2C (Fragment) OS=Nico... 117 2e-25 tr|B8AW54|B8AW54_ORYSI Putative uncharacterized protein OS=Oryza... 117 2e-25 tr|A7QTW8|A7QTW8_VITVI Chromosome undetermined scaffold_171, who... 117 2e-25 tr|A3B6A1|A3B6A1_ORYSJ Putative uncharacterized protein OS=Oryza... 117 2e-25 tr|A1IGC7|A1IGC7_TOBAC Protein phosphatase 2C OS=Nicotiana tabac... 117 2e-25 tr|Q8RVG0|Q8RVG0_TOBAC Protein phosphatase 2C OS=Nicotiana tabac... 116 6e-25 tr|B6TY17|B6TY17_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 115 1e-24 tr|B8AWV1|B8AWV1_ORYSI Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|A5A6P9|A5A6P9_TRIMO Protein phosphatase 2C OS=Triticum monoco... 114 2e-24 tr|A5A6P8|A5A6P8_WHEAT Protein phosphatase 2C OS=Triticum aestiv... 114 2e-24 tr|A7PE34|A7PE34_VITVI Chromosome chr11 scaffold_13, whole genom... 114 2e-24 tr|A4Q9E3|A4Q9E3_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9D5|A4Q9D5_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9D3|A4Q9D3_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9D1|A4Q9D1_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9D0|A4Q9D0_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9C6|A4Q9C6_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9C5|A4Q9C5_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9C4|A4Q9C4_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9B9|A4Q9B9_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24 tr|A4Q9B7|A4Q9B7_POPTN Abscisic insensitive 1B OS=Populus tremul... 114 2e-24
>tr|B1B5N6|B1B5N6_PHYPA Protein phosphatase 2C OS=Physcomitrella patens GN=PpABI1B PE=2 SV=1 Length = 587
Score = 134 bits (336), Expect = 3e-30 Identities = 70/120 (58%), Positives = 83/120 (69%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYRV +LA+SRAIGDRYLK YVI EP+V C +RT++DE LILASDGLWDV Sbjct: 462 AGGRVIYWNGYRVLGVLAMSRAIGDRYLKPYVIPEPEVKCVKRTEDDEFLILASDGLWDV 521
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + N+ ACDVA + +A AA+TLVK A +GS DNI+VVVVDL Sbjct: 522 MPNEVACDVARRSLNSKRNCQPKADGQDEETPAAQAAATLVKFALAKGSSDNISVVVVDL 581
>tr|A9SHN9|A9SHN9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_13662 PE=4 SV=1 Length = 315
Score = 134 bits (336), Expect = 3e-30 Identities = 70/120 (58%), Positives = 83/120 (69%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYRV +LA+SRAIGDRYLK YVI EP+V C +RT++DE LILASDGLWDV Sbjct: 195 AGGRVIYWNGYRVLGVLAMSRAIGDRYLKPYVIPEPEVKCVKRTEDDEFLILASDGLWDV 254
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + N+ ACDVA + +A AA+TLVK A +GS DNI+VVVVDL Sbjct: 255 MPNEVACDVARRSLNSKRNCQPKADGQDEETPAAQAAATLVKFALAKGSSDNISVVVVDL 314
>tr|B1B5N7|B1B5N7_PHYPA Protein phosphatase 2C OS=Physcomitrella patens GN=PpABI1A PE=2 SV=1 Length = 595
Score = 133 bits (334), Expect = 5e-30 Identities = 67/120 (55%), Positives = 82/120 (68%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYRV +LA+SRA+GDRYLK YVI EP+V C +R ++DECLILASDGLWDV Sbjct: 470 AGGRVIYWNGYRVLGVLAMSRALGDRYLKPYVIPEPEVQCIKRAEDDECLILASDGLWDV 529
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + N+ CD+A + +A AA+ LVKLA +GS DNI+VVVVDL Sbjct: 530 MSNEAVCDIARRALSCRRNVQPPVDGQEEETPAAQAAALLVKLALSKGSTDNISVVVVDL 589
>tr|A9TT55|A9TT55_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_32342 PE=4 SV=1 Length = 316
Score = 133 bits (334), Expect = 5e-30 Identities = 67/120 (55%), Positives = 82/120 (68%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYRV +LA+SRA+GDRYLK YVI EP+V C +R ++DECLILASDGLWDV Sbjct: 193 AGGRVIYWNGYRVLGVLAMSRALGDRYLKPYVIPEPEVQCIKRAEDDECLILASDGLWDV 252
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + N+ CD+A + +A AA+ LVKLA +GS DNI+VVVVDL Sbjct: 253 MSNEAVCDIARRALSCRRNVQPPVDGQEEETPAAQAAALLVKLALSKGSTDNISVVVVDL 312
>tr|B8A6V5|B8A6V5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03122 PE=4 SV=1 Length = 459
Score = 121 bits (304), Expect = 1e-26 Identities = 65/122 (53%), Positives = 80/122 (65%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYR+ +LA SR+IGD YLK YVI+EP+V +RTD+DE LILASDGLWDV Sbjct: 253 AGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDV 312
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + ND AC +A +A AA+ LV+LA GS+DNI+VVVV+L Sbjct: 313 VSNDVACKIARNCLSGRAASKYPESVSGS--TAADAAALLVELAISRGSKDNISVVVVEL 370
Query: 361 SR 366 R Sbjct: 371 RR 372
>tr|A2ZW56|A2ZW56_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002778 PE=3 SV=1 Length = 483
Score = 121 bits (304), Expect = 1e-26 Identities = 65/122 (53%), Positives = 80/122 (65%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W GYR+ +LA SR+IGD YLK YVI+EP+V +RTD+DE LILASDGLWDV Sbjct: 303 AGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDV 362
Query: 181 IDNDTACDVAXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVVVDL 360 + ND AC +A +A AA+ LV+LA GS+DNI+VVVV+L Sbjct: 363 VSNDVACKIARNCLSGRAASKYPESVSGS--TAADAAALLVELAISRGSKDNISVVVVEL 420
Query: 361 SR 366 R Sbjct: 421 RR 422
>tr|A9PFK6|A9PFK6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 390
Score = 120 bits (300), Expect = 4e-26 Identities = 69/127 (54%), Positives = 77/127 (60%), Gaps = 3/127 (2%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W G RV +LA+SRAIGD YLK YVI EP+V ER +EDECLILASDGLWDV Sbjct: 263 AGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVIPEPEVTVTERMEEDECLILASDGLWDV 322
Query: 181 IDNDTACDV---AXXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITVVV 351 + NDTAC V D A + A+ L KLA S DNI+VVV Sbjct: 323 VSNDTACGVVRMCLRAQKPPSPPGSNGALGSSDKACSDASVLLTKLALARHSTDNISVVV 382
Query: 352 VDLSRRQ 372 VDL R Q Sbjct: 383 VDLRRNQ 389
>tr|Q9M3V1|Q9M3V1_FAGSY Protein phpsphatase 2C (PP2C) OS=Fagus sylvatica GN=pp2C1 PE=2 SV=1 Length = 413
Score = 119 bits (297), Expect = 1e-25 Identities = 69/135 (51%), Positives = 79/135 (58%), Gaps = 10/135 (7%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W G RV +LA+SRAIGD YLK YVISEP+V +RT EDECLILASDGLWDV Sbjct: 278 AGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTITDRTAEDECLILASDGLWDV 337
Query: 181 IDNDTACDVA----------XXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQ 330 + N+TAC VA D A + A+ L KLA S Sbjct: 338 VSNETACGVARMCLRAQKPSSPPRSPGNDMAVGAASESSDKACSDASILLTKLALARHST 397
Query: 331 DNITVVVVDLSRRQQ 375 DN++VVVVDL R Q Sbjct: 398 DNVSVVVVDLRRNHQ 412
>tr|Q71QD5|Q71QD5_PRUAV Protein phosphatase 2C OS=Prunus avium GN=pp2c PE=2 SV=1 Length = 426
Score = 118 bits (296), Expect = 1e-25 Identities = 67/127 (52%), Positives = 77/127 (60%), Gaps = 5/127 (3%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W G RV +LA+SRAIGD YLK YVISEP+V +R+ EDECLILASDGLWDV Sbjct: 296 AGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTIMDRSAEDECLILASDGLWDV 355
Query: 181 IDNDTACDVA-----XXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQDNITV 345 + NDTAC V D A + A+ L KLA S DN++V Sbjct: 356 VSNDTACGVVRMCLRAQKTTSHSESSGRDAAVRSDKACSDASILLTKLALARQSSDNVSV 415
Query: 346 VVVDLSR 366 VVVDL R Sbjct: 416 VVVDLRR 422
>tr|Q76BK7|Q76BK7_TOBAC Protein phosphatase 2C (Fragment) OS=Nicotiana tabacum GN=NtPP2C2 PE=2 SV=1 Length = 143
Score = 117 bits (294), Expect = 2e-25 Identities = 68/132 (51%), Positives = 78/132 (59%), Gaps = 10/132 (7%) Frame = +1
Query: 1 AGGRVIAWKGYRVGALLAVSRAIGDRYLKRYVISEPDVVCFERTDEDECLILASDGLWDV 180 AGGRVI W G RV +LA+SRAIGD YLK YVISEP+V ERTDEDECLILASDGLWDV Sbjct: 10 AGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTITERTDEDECLILASDGLWDV 69
Query: 181 IDNDTACDVA----------XXXXXXXXXXXXXXXXXXXDFASATAASTLVKLACGEGSQ 330 + N+TAC VA D + A+ L KLA S Sbjct: 70 VSNETACGVARMCLQSRRPPSPQGPPENDVTVTGAGESSDQLCSDASILLTKLALARHST 129
Query: 331 DNITVVVVDLSR 366 DN++VVVVDL + Sbjct: 130 DNVSVVVVDLRK 141
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