BP916998
Clone id YMU001_000094_E06
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACTGGAAGAATTCGCGGCCGCAGGACACCCTCAGGACACCTGATGGAAACGCTCTCGGAA
TGCTGAATTGCCGATGCCAAAATCGGAAACCTGTTTGCACTTTTGAAAGTGCACGCGCAC
GGACGCGAAAACGGCAAACACAAACCCTGCTCTGATACCAGTTGAAGGTGCCACGAGAAG
CGTGTGCGAGTGCAAGTGCGAGAGCAGAGAGAGGGAGAGAGACCTGCTTTGGGTGTAGCG
CACAACAACATTATCCTGTGCAGCTCTTTATTCTGTTGTATTAAAGAATAAGTGTCTACA
TGGTTAAGTTAGTAGATAGGTTAGCAGTAAGTGGGATGTCCGGCCAGTTGGCCTGAATCC
CAACATAGGCATTTTTGCATGGCAATAGAAAATGCATGGAAATATAGTATTTCAACCGCC
CTTAGTGCCCAACATGCATTTAAGGGTCTTCTAGTCACCACCAAGGTGCCACTCTATTTC
AAAGTCTCCAATTTCAAGGACTTTGA
■■Homology search results ■■ -
sp_hit_id Q06194
Definition sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus
Align length 55
Score (bit) 29.6
E-value 7.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916998|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_E06.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus GN=F... 30 7.4
sp|Q2M243|CCD27_HUMAN Coiled-coil domain-containing protein 27 O... 30 7.5
sp|O14200|YDQ7_SCHPO Uncharacterized protein C5D6.07c OS=Schizos... 29 9.6
sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Asper... 29 9.8

>sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus GN=F8
PE=2 SV=1
Length = 2319

Score = 29.6 bits (65), Expect = 7.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3

Query: 315 PASWPESQHRHFCMAIENAWKYSISTALSAQHAFKGLLVTTKVPLYFKVSNFKDF 479
P S+ + +F A+E W Y +ST+ H + + VP + KV F++F
Sbjct: 1677 PRSFQQKTRHYFIAAVERLWDYGMSTS----HVLRNRYQSDNVPQFKKVV-FQEF 1726


>sp|Q2M243|CCD27_HUMAN Coiled-coil domain-containing protein 27
OS=Homo sapiens GN=CCDC27 PE=2 SV=2
Length = 656

Score = 29.6 bits (65), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1

Query: 193 SPSLCSRTCTRTRFSWHLQLVSEQGLCL 110
S S+ S++C R R W+L ++ E+ CL
Sbjct: 214 SSSVASQSCLRKRMPWYLSVIHEKDHCL 241


>sp|O14200|YDQ7_SCHPO Uncharacterized protein C5D6.07c
OS=Schizosaccharomyces pombe GN=SPAC5D6.07c PE=2 SV=1
Length = 495

Score = 29.3 bits (64), Expect = 9.6
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +3

Query: 318 ASWPESQHRHFCMAIENA--------WKYSISTALS-AQHAFKGLLVTTKVPLYFKVSNF 470
AS PE+ ++ F + + A WK SI+TA+ HAF+ LL+T VP YF + F
Sbjct: 157 ASSPETMYK-FIIYLSKAILQPSRRPWKESITTAVRWVWHAFRILLITRGVP-YFSTAWF 214

Query: 471 K 473
+
Sbjct: 215 Q 215


>sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16
OS=Aspergillus oryzae GN=sec16 PE=3 SV=1
Length = 1843

Score = 29.3 bits (64), Expect = 9.8
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1

Query: 163 RTRFSWHLQLVSEQGLCLPFSRPCACTFKSANRFPILASAIQHSESVSIRCPEG 2
RTR++ VS QG LPF P +S + H E VS + PEG
Sbjct: 688 RTRYASQPSSVSSQGAVLPFQ-------------PRTSSPLAHHEKVSYQPPEG 728


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916998|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_E06.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******