BP916999
Clone id YMU001_000094_E07
Library
Length 456
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTCGCGGCCTCCTCAACCCTAAACTTAAGTCTTGATGTCCCCCATCACTATCTCATATA
CCCTCTCCCTTTGCTGCTTTGGTAAGCATGCTTCTAGATTTTGTAAAACTCTCTCCTTCA
CTCTGTGTTAGTATCTCATGTACCCTCTCCTCCTCTCCTTCGGCTGCTCTGGTGAGCATG
GTTCTAGATTTTGTAGGACTCTTTCTTTGGTCGTAATACAGTTGATCACTCTTGTTGTGG
TTCACTTTGAGGTCCTCAATTGTAGTTGGTTGTTCTTCGATTAACTCTGCTCGCTTCGTT
GACTTTTGTTTGGCCTACCCACTATCTCAACCCGACTAATACCTTATTAAAACTTCTGAT
GATCTCTAGCACCTCTCACATGGCACTAAGTTCTTTTTGCTATTTATATAAGTCTCTGTG
CTCTTCATTTGGGTATCTTGTGGGTGTGCCATTTAC
■■Homology search results ■■ -
sp_hit_id Q9UJC3
Definition sp|Q9UJC3|HOOK1_HUMAN Protein Hook homolog 1 OS=Homo sapiens
Align length 121
Score (bit) 34.3
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916999|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_E07.
(456 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UJC3|HOOK1_HUMAN Protein Hook homolog 1 OS=Homo sapiens GN=... 34 0.26
sp|Q7N8V1|RAPA_PHOLL RNA polymerase-associated protein rapA OS=P... 32 0.99
sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi... 32 0.99
sp|A8MRT5|K220L_HUMAN Putative uncharacterized protein KIAA0220-... 32 1.3
sp|Q92617|K0220_HUMAN NPIP-like protein KIAA0220 OS=Homo sapiens... 32 1.3
sp|Q55CZ6|U557_DICDI UPF0557 protein OS=Dictyostelium discoideum... 32 1.7
sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helic... 31 2.9
sp|A9IMT5|IF2_BART1 Translation initiation factor IF-2 OS=Barton... 30 4.9
sp|Q57911|SYFA_METJA Phenylalanyl-tRNA synthetase alpha chain OS... 30 6.4
sp|Q5R1P0|NMDZ1_CANFA Glutamate [NMDA] receptor subunit zeta-1 O... 30 6.4
sp|Q07283|TRHY_HUMAN Trichohyalin OS=Homo sapiens GN=TCHH PE=1 SV=2 29 8.4
sp|A4G8D2|DNAK_HERAR Chaperone protein dnaK OS=Herminiimonas ars... 29 8.4
sp|Q7S2Y8|DML1_NEUCR Protein dml-1 OS=Neurospora crassa GN=dml-1... 29 8.4
sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculu... 29 8.4

>sp|Q9UJC3|HOOK1_HUMAN Protein Hook homolog 1 OS=Homo sapiens
GN=HOOK1 PE=1 SV=2
Length = 728

Score = 34.3 bits (77), Expect = 0.26
Identities = 33/121 (27%), Positives = 56/121 (46%)
Frame = -2

Query: 446 HPQDTQMKSTETYINSKKNLVPCERC*RSSEVLIRY*SG*DSG*AKQKSTKRAELIEEQP 267
H T +T++Y N ++P E EV IR +Q+ ++ + E Q
Sbjct: 439 HLNQTDASATKSYENLAAEIMPVEY----REVFIRLQHENKMLRLQQEGSENERIEELQ- 493

Query: 266 TTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGEEERVHEILTQSEGESFTKSRSM 87
E L+ H K ++L +QR S + R L + E ++ + E ++SEGES +K +
Sbjct: 494 ---EQLEQKHRKMNELETEQRLSKERIRE-LQQQIEDLQKSLQEQGSKSEGESSSKLKQK 549

Query: 86 L 84
L
Sbjct: 550 L 550


>sp|Q7N8V1|RAPA_PHOLL RNA polymerase-associated protein rapA
OS=Photorhabdus luminescens subsp. laumondii GN=rapA PE=3
SV=1
Length = 970

Score = 32.3 bits (72), Expect = 0.99
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = -2

Query: 305 KSTKRAELIEEQPTT----IEDLKVNHNKSDQLYYDQ--RKSPTKSRTMLTRAAEGEEER 144
++ KR +L P T + DLK N N +DQ+ ++ R+ +R ++ ++
Sbjct: 827 QAPKRLQLTRFLPPTPLRILMDLKGN-NLADQVEFESFNRQLNAVNRHTASKLVNAVQKE 885

Query: 143 VHEILTQSEGESFTKSRSMLTKA 75
VH IL Q+EG T+++S++ +A
Sbjct: 886 VHAILQQAEGLVETQAKSLIEQA 908


>sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi
GN=per PE=2 SV=1
Length = 849

Score = 32.3 bits (72), Expect = 0.99
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 8/44 (18%)
Frame = -2

Query: 314 AKQKSTKRAE--------LIEEQPTTIEDLKVNHNKSDQLYYDQ 207
AKQ+ +KR + LIEEQP ++DL++ +D YY++
Sbjct: 463 AKQQMSKRCQDLAHFMEMLIEEQPKPVDDLRLEIQDADHSYYER 506


>sp|A8MRT5|K220L_HUMAN Putative uncharacterized protein
KIAA0220-like OS=Homo sapiens GN=KIAA022L PE=5 SV=2
Length = 678

Score = 32.0 bits (71), Expect = 1.3
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -3

Query: 208 KERVLQNLEPCSPEQPKERRRGYMRY*HRVKERVLQNLEACLPKQQRERV 59
K R ++EP SPE PK RR G + + K R ++E LP+ +R R+
Sbjct: 629 KRRRAADVEPSSPE-PKRRRVGDVEPSRKPKRRRAADVEPSLPEPKRRRL 677


>sp|Q92617|K0220_HUMAN NPIP-like protein KIAA0220 OS=Homo sapiens
GN=KIAA0220 PE=2 SV=5
Length = 1050

Score = 32.0 bits (71), Expect = 1.3
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -3

Query: 208 KERVLQNLEPCSPEQPKERRRGYMRY*HRVKERVLQNLEACLPKQQRERV 59
K R ++EP SPE PK RR G + + K R ++E LP+ +R R+
Sbjct: 1001 KRRRAADVEPSSPE-PKRRRVGDVEPSRKPKRRRAADVEPSLPEPKRRRL 1049


>sp|Q55CZ6|U557_DICDI UPF0557 protein OS=Dictyostelium discoideum
GN=DDB_G0270664 PE=3 SV=1
Length = 719

Score = 31.6 bits (70), Expect = 1.7
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -2

Query: 290 AELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGEEERVHEILTQSEGE 111
+ L+ ++ I+D + N++D+ + + + T T + EGEEE EGE
Sbjct: 181 SSLLNKKKRNIDDADMK-NENDEENKKSKDQKSTTTTTTTTSKEGEEEG-------EEGE 232

Query: 110 SFTKSRSMLT 81
TKS+ +LT
Sbjct: 233 QLTKSKKLLT 242


>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase
PRP5 OS=Gibberella zeae GN=PRP5 PE=3 SV=1
Length = 1227

Score = 30.8 bits (68), Expect = 2.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2

Query: 212 DQRKSPTKSRTMLTRAAEGEEERVHEILTQSEGESFTKSRSMLTKAAKG 66
DQ + + R AEGEEE V E + E E K+ + AA G
Sbjct: 1008 DQEREAARLRERKVHKAEGEEEEVTEDKKEDEDEKAEKALDAIRAAASG 1056


>sp|A9IMT5|IF2_BART1 Translation initiation factor IF-2
OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=infB PE=3 SV=1
Length = 842

Score = 30.0 bits (66), Expect = 4.9
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -2

Query: 284 LIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGEEERVHEILTQS---EG 114
++ + T IE K++ N+ ++ + +R +P KS + +G +ER LT + +
Sbjct: 168 IVPKNTTVIEKRKIDENQEEERH-SRRANPAKSEIRAPKIVKGADERRRGKLTLNSALDE 226

Query: 113 ESFTKSRSMLTKAAKGE 63
E + RSM + E
Sbjct: 227 EGSARGRSMAAMRRRQE 243


>sp|Q57911|SYFA_METJA Phenylalanyl-tRNA synthetase alpha chain
OS=Methanocaldococcus jannaschii GN=pheS PE=3 SV=1
Length = 480

Score = 29.6 bits (65), Expect = 6.4
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -3

Query: 223 NCITTKERVLQNLEPCSPEQPKERRRGYMRY*HRVKERVLQNLEACLPKQQ 71
N + T+E+V + ++ E+ ER+ H +KE ++NL+ LPK++
Sbjct: 47 NLVETEEKVKKIIKLIKEEEFPERKIANYLKQHNIKEIEIKNLKDILPKEE 97


>sp|Q5R1P0|NMDZ1_CANFA Glutamate [NMDA] receptor subunit zeta-1
OS=Canis familiaris GN=GRIN1 PE=2 SV=2
Length = 943

Score = 29.6 bits (65), Expect = 6.4
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Frame = -2

Query: 296 KRAE-LIEEQPTTIEDLKVNHNKSDQLYYDQRKSP-----------TKSRTMLTRAAEGE 153
KR E L+EE+ + + K N+ DQL YD ++ P TK+ T L A
Sbjct: 178 KRLETLLEERES--KSKKRNYENLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLMEAREL 235

Query: 152 EERVHEILTQSEGESFTKSRSMLTKAAKGEG 60
E RV IL+ SE ++ T R+ G G
Sbjct: 236 EARV-IILSASEDDAATVYRAAAMLNMTGSG 265


tr_hit_id B7FM69
Definition tr|B7FM69|B7FM69_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 83
Score (bit) 39.7
E-value 0.076
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916999|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_E07.
(456 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FM69|B7FM69_MEDTR Putative uncharacterized protein OS=Medic... 40 0.076
tr|B6QS43|B6QS43_PENMA Putative uncharacterized protein OS=Penic... 39 0.13
tr|B8LWI1|B8LWI1_9EURO Putative uncharacterized protein OS=Talar... 38 0.22
tr|Q228T6|Q228T6_TETTH Putative uncharacterized protein OS=Tetra... 37 0.38
tr|A1CIF7|A1CIF7_ASPCL Putative uncharacterized protein OS=Asper... 36 0.84
tr|B6PG60|B6PG60_BRAFL Putative uncharacterized protein OS=Branc... 36 1.1
tr|Q5AMQ2|Q5AMQ2_CANAL Putative uncharacterized protein CLC1 OS=... 36 1.1
tr|Q4WQC6|Q4WQC6_ASPFU Putative uncharacterized protein OS=Asper... 36 1.1
tr|B0Y4J5|B0Y4J5_ASPFC Putative uncharacterized protein OS=Asper... 36 1.1
tr|Q54W10|Q54W10_DICDI Putative uncharacterized protein OS=Dicty... 35 2.4
tr|B6KJY4|B6KJY4_TOXGO Putative uncharacterized protein OS=Toxop... 34 3.2
tr|B4DX15|B4DX15_HUMAN cDNA FLJ53232, highly similar to Hook hom... 34 3.2
tr|A8K8E9|A8K8E9_HUMAN cDNA FLJ76934, highly similar to Homo sap... 34 3.2
tr|B8NRQ0|B8NRQ0_ASPFL Myosin heavy chain, clone, putative OS=As... 34 3.2
tr|A1CWA3|A1CWA3_NEOFI Putative uncharacterized protein OS=Neosa... 34 3.2
tr|A9V8L8|A9V8L8_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.1
tr|B4LB91|B4LB91_DROVI GJ12575 OS=Drosophila virilis GN=GJ12575 ... 34 4.2
tr|B1H1H9|B1H1H9_DANRE Pus7 protein OS=Danio rerio GN=pus7 PE=2 ... 33 5.4
tr|Q8CNV6|Q8CNV6_STAES Smooth muscle caldesmon OS=Staphylococcus... 33 5.4
tr|Q5HNH1|Q5HNH1_STAEQ Putative uncharacterized protein OS=Staph... 33 5.4
tr|B0N695|B0N695_9FIRM Putative uncharacterized protein OS=Clost... 33 5.4
tr|B8C8W3|B8C8W3_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.1
tr|Q64JW5|Q64JW5_PLAVI Merozoite surface protein 3b (Fragment) O... 33 7.1
tr|B6NNY2|B6NNY2_BRAFL Putative uncharacterized protein OS=Branc... 33 7.1
tr|A7F074|A7F074_SCLS1 Putative uncharacterized protein OS=Scler... 33 7.1
tr|A6L9V6|A6L9V6_PARD8 DNA repair protein recN OS=Parabacteroide... 33 9.3
tr|B3Y970|B3Y970_LACPL Amylopullulanase OS=Lactobacillus plantar... 33 9.3
tr|A9EEQ2|A9EEQ2_LACPL Amylopullulanase OS=Lactobacillus plantar... 33 9.3
tr|Q8I8F0|Q8I8F0_EUPCR Chromosome scaffold protein p85 OS=Euplot... 33 9.3
tr|Q4XV56|Q4XV56_PLACH Putative uncharacterized protein (Fragmen... 33 9.3

>tr|B7FM69|B7FM69_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 488

Score = 39.7 bits (91), Expect = 0.076
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -2

Query: 314 AKQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGE-EERVH 138
A K K+ ++E TT++DL++ + Y+ + S K+ LT E E E ++
Sbjct: 2 ASSKLNKKVFDLKEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTEKHEKEIVEALY 61

Query: 137 EILTQSEGESFTKSRSMLTKAAK 69
L++SE ESF + ML + K
Sbjct: 62 SDLSKSEAESFIQEVGMLKNSCK 84


>tr|B6QS43|B6QS43_PENMA Putative uncharacterized protein
OS=Penicillium marneffei ATCC 18224 GN=PMAA_043700 PE=4
SV=1
Length = 534

Score = 38.9 bits (89), Expect = 0.13
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -2

Query: 314 AKQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKS 186
A + + +LIEE TT+ +LKVN K D++Y ++K+P KS
Sbjct: 488 AHTRRLRGGKLIEETSTTLTELKVNDRKRDKMYLVRKKNPGKS 530


>tr|B8LWI1|B8LWI1_9EURO Putative uncharacterized protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_076580 PE=4
SV=1
Length = 524

Score = 38.1 bits (87), Expect = 0.22
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2

Query: 287 ELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKS 186
+LIEE TT+ +LKVN K D++Y ++K+P KS
Sbjct: 487 KLIEETSTTLTELKVNDRKRDKMYLVRKKNPGKS 520


>tr|Q228T6|Q228T6_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01499910 PE=4
SV=1
Length = 243

Score = 37.4 bits (85), Expect = 0.38
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Frame = -2

Query: 311 KQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGEEER---- 144
KQK T+ +E+ T E+ NH + ++L YD+RK + L EEE+
Sbjct: 25 KQKITEETNEDKEEDPTTEENNENHEEEEELDYDERKRREEEEERLAEQEYLEEEKRKND 84

Query: 143 -------VHEILTQSEGESFTKSRSMLTKAAKG 66
VH+ +++G+ F + S + + +G
Sbjct: 85 EINEMMAVHQRERKNDGKCFLDAFSSIVQNDRG 117


>tr|A1CIF7|A1CIF7_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_051340 PE=4 SV=1
Length = 553

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -2

Query: 314 AKQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLT 171
A + + +LI E +++ +LKVN K D++Y ++KSP + +LT
Sbjct: 506 AHTRRLREGKLITETSSSLTELKVNDRKKDRMYLVRKKSPNRRAWILT 553


>tr|B6PG60|B6PG60_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_106560 PE=4 SV=1
Length = 4680

Score = 35.8 bits (81), Expect = 1.1
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -2

Query: 287 ELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLTRAAEGEEERVHEILTQSEGES 108
E + PT +EDL + + L+ D K K +T LT + +GEEE HE ES
Sbjct: 3292 ETVTSTPTLVEDL---FDTEEALHVDNEKLEVKEQT-LTESNDGEEEECHECPDNEFEES 3347

Query: 107 FTKSRSML----TKAAKGEGI*DSDGG 39
T S ++ T + + DS GG
Sbjct: 3348 PTISERLVDMYCTAMLPEKSVIDSCGG 3374


>tr|Q5AMQ2|Q5AMQ2_CANAL Putative uncharacterized protein CLC1
OS=Candida albicans GN=CLC1 PE=4 SV=1
Length = 225

Score = 35.8 bits (81), Expect = 1.1
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Frame = -2

Query: 311 KQKSTKRAELIEEQPTTIEDLKVNHNK-----SDQLYYDQRKSPTKSRTMLTRAAEGEEE 147
K S K+ E+IE+ +TI+D N+N ++ +Q K +K L R +
Sbjct: 124 KLNSKKKEEIIEKAKSTIDDFYENYNSKRDNHQKEILSEQEKFISKRDDFLKRGTLW--D 181

Query: 146 RVHEILTQ------SEGESFTKSRSMLTKAAKGEGI*DSDGGHQD 30
RV+E++T+ E T+ + +LTK KG+ GG+Q+
Sbjct: 182 RVNELVTEVGELPGDESRDKTRFKELLTK-LKGKENVPGAGGYQE 225


>tr|Q4WQC6|Q4WQC6_ASPFU Putative uncharacterized protein
OS=Aspergillus fumigatus GN=AFUA_4G12350 PE=4 SV=1
Length = 499

Score = 35.8 bits (81), Expect = 1.1
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -2

Query: 314 AKQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLT 171
A + + +L+ E +T+ +LKVN K D++Y ++KSP + + T
Sbjct: 452 AHTRRLREGKLVTETSSTLTELKVNDRKKDRMYLVRKKSPNRRAWIFT 499


>tr|B0Y4J5|B0Y4J5_ASPFC Putative uncharacterized protein
OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=AFUB_069310 PE=4 SV=1
Length = 499

Score = 35.8 bits (81), Expect = 1.1
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -2

Query: 314 AKQKSTKRAELIEEQPTTIEDLKVNHNKSDQLYYDQRKSPTKSRTMLT 171
A + + +L+ E +T+ +LKVN K D++Y ++KSP + + T
Sbjct: 452 AHTRRLREGKLVTETSSTLTELKVNDRKKDRMYLVRKKSPNRRAWIFT 499


>tr|Q54W10|Q54W10_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0205903 PE=4 SV=1
Length = 397

Score = 34.7 bits (78), Expect = 2.4
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = -2

Query: 260 IEDLKVNHNKSDQLYYD---QRKSPTKSRTMLTRAAEGEEERVHEILTQSEGESFTKSRS 90
++ L NKSD++YYD Q KS ++ + +E E+E L + + E S+
Sbjct: 30 VKKLNPRENKSDKVYYDAIKQGKSKQEASKIYKEFSEKEKE-----LYEKKIEDICNSKK 84

Query: 89 MLTKAAKGEGI*DSDGG 39
+L + GE D DGG
Sbjct: 85 VLKSSFVGEPSGDCDGG 101