BP917002 |
Clone id |
YMU001_000094_E11 |
Library |
YMU01 |
Length |
424 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_E11. |
Accession |
BP917002 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1761Contig1 |
Sequence |
CATCATCATCGCATCTGCATCATCTTCCATTTCATTGTCTGCTTCCTCAGAATCACTTCC GTCACCAAGAAGAATTTGCCCAGTGACAGACTTAGAAAGCACTTTCAAGGAAGTCTTGCC ATTAGAGGTGGCATACCCCTCCTTTTCCTTTGCAGGTCCAGCATGAGGAGGTGTAGCACT TTCAGCCCGAAGTGCTTCCTCTGCATTCAACTTCTCGACTTCTGGCAAAACCATCGAGTT CATGAAGGCATCAAGAGGATCAACATCATCCTCCTCAGCTGCAGCTGTTGCTAATGCAGC TGAAACATTAGCATTTGCTTGATCTCCTTCCATGATGGTGTCCACTTGTATATCTCCCAT AAAAATATCTCCACCATTCTCAATAGGACCAATGTCAATCTTCACTTTGTTCCCATCCGC ATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0J7Y8 |
Definition |
sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica |
Align length |
77 |
Score (bit) |
54.7 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BAV6 |
Definition |
tr|B8BAV6|B8BAV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
77 |
Score (bit) |
54.7 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917002|Adiantum capillus-veneris mRNA, clone: YMU001_000094_E11. (424 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BAV6|B8BAV6_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06 tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza... 54 4e-06 tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Ar... 49 1e-04 tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome ... 49 2e-04 tr|Q0WM14|Q0WM14_ARATH Putative RNA helicase (Fragment) OS=Arabi... 48 3e-04 tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A8JHQ1|A8JHQ1_CHLRE DnaJ-like protein OS=Chlamydomonas reinha... 38 0.28 tr|Q16HL1|Q16HL1_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 36 0.82 tr|A5UTM8|A5UTM8_ROSS1 Phosphonate metabolism OS=Roseiflexus sp.... 35 1.8 tr|B8G9J6|B8G9J6_9CHLR Phosphonate metabolism OS=Chloroflexus ag... 35 1.8 tr|B0WGF2|B0WGF2_CULQU Putative uncharacterized protein OS=Culex... 35 2.4 tr|A8NXX3|A8NXX3_COPC7 Putative uncharacterized protein OS=Copri... 33 5.3 tr|Q4CXX9|Q4CXX9_TRYCR Putative uncharacterized protein OS=Trypa... 33 7.0
>tr|B8BAV6|B8BAV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27844 PE=4 SV=1 Length = 238
Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGY-ATSNGKTSLKV 100 EED++DPLDAFM+SMVLPEV KL A ES + G K A SNG K Sbjct: 107 EEDEIDPLDAFMSSMVLPEVAKLETAVA-SMESMPASNMGDKNGKSAKDAVSNGD---KK 162
Query: 99 LSKSVTGQILLGDGSDS 49 K G+I+ GD SDS Sbjct: 163 GQKKAMGRIMQGDDSDS 179
>tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025029 PE=4 SV=1 Length = 1574
Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGY-ATSNGKTSLKV 100 EED++DPLDAFM+SMVLPEV KL A ES + G K A SNG K Sbjct: 787 EEDEIDPLDAFMSSMVLPEVAKLETAVA-SMESMPASNMGDKNGKSAKDAVSNGD---KK 842
Query: 99 LSKSVTGQILLGDGSDS 49 K G+I+ GD SDS Sbjct: 843 GQKKAMGRIMQGDDSDS 859
>tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27901 PE=4 SV=1 Length = 1049
Score = 53.9 bits (128), Expect = 4e-06 Identities = 35/76 (46%), Positives = 47/76 (61%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNGKTSLKVL 97 +ED++DPLDAFMNSMVLPEV KL E++ A + + AK+ A +NG K Sbjct: 274 DEDEIDPLDAFMNSMVLPEVAKL---ESMPAANVDDKNDKSAKD----AVTNGD---KKG 323
Query: 96 SKSVTGQILLGDGSDS 49 K V G+I+ G+ SDS Sbjct: 324 PKKVMGRIIQGEDSDS 339
>tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025075 PE=3 SV=1 Length = 1039
Score = 53.9 bits (128), Expect = 4e-06 Identities = 35/76 (46%), Positives = 47/76 (61%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNGKTSLKVL 97 +ED++DPLDAFMNSMVLPEV KL E++ A + + AK+ A +NG K Sbjct: 274 DEDEIDPLDAFMNSMVLPEVAKL---ESMPAANVDDKNDKSAKD----AVTNGD---KKG 323
Query: 96 SKSVTGQILLGDGSDS 49 K V G+I+ G+ SDS Sbjct: 324 PKKVMGRIIQGEDSDS 339
>tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Arabidopsis thaliana GN=At1g20920 PE=3 SV=1 Length = 828
Score = 48.9 bits (115), Expect = 1e-04 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Frame = -2
Query: 381 ENGGDIFMGDIQVDTIMEGDQXXXXXXXXXXXXXAEEDDVDPLDAFMNSMVLPEVEKLNA 202 EN GD M D++ +T + +E+++DPLDAFMN+MVLPEVEK Sbjct: 10 ENDGDAKMVDLENETAATVSESGGDGAV-------DEEEIDPLDAFMNTMVLPEVEKF-- 60
Query: 201 EEALRAESATPPHAGPAK-EKEGYATSNGKTSLKVLSKSVTGQILLGDGSDS 49 A PP + + +G K +K++ G+I+ G+ SDS Sbjct: 61 -----CNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKAL-GRIIQGEDSDS 106
>tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036305001 PE=4 SV=1 Length = 971
Score = 48.5 bits (114), Expect = 2e-04 Identities = 25/60 (41%), Positives = 36/60 (60%) Frame = -2
Query: 273 EDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNGKTSLKVLS 94 ++++DPLDAFMNSMVLPEVEKLN +A P+ ++ + + KT + LS Sbjct: 373 DEEIDPLDAFMNSMVLPEVEKLNNAAVSPTSNAVVPNPLEEEDDDEFMKRVKKTKAERLS 432
>tr|Q0WM14|Q0WM14_ARATH Putative RNA helicase (Fragment) OS=Arabidopsis thaliana GN=At3g09620 PE=2 SV=1 Length = 632
Score = 47.8 bits (112), Expect = 3e-04 Identities = 35/112 (31%), Positives = 53/112 (47%) Frame = -2
Query: 384 IENGGDIFMGDIQVDTIMEGDQXXXXXXXXXXXXXAEEDDVDPLDAFMNSMVLPEVEKLN 205 +ENGGD M + +T + + +ED++DPLDAFMN+MVLPEVEKL+ Sbjct: 184 LENGGDAKMVASENETAVTVSENGGDRAA-------DEDEIDPLDAFMNTMVLPEVEKLS 236
Query: 204 AEEALRAESATPPHAGPAKEKEGYATSNGKTSLKVLSKSVTGQILLGDGSDS 49 + + G + K +K+ G+I+ G+ SDS Sbjct: 237 NIV-----------IDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDSDS 277
>tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149955 PE=3 SV=1 Length = 1072
Score = 45.8 bits (107), Expect = 0.001 Identities = 31/76 (40%), Positives = 44/76 (57%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNGKTSLKVL 97 EE+++DPLDAFMNS+ +PEV +A E L A + P AK G N K +K Sbjct: 328 EEEEIDPLDAFMNSITIPEVSSTDAVE-LDAPESKPI---VAKSGSGKGQDNVK-PVKRN 382
Query: 96 SKSVTGQILLGDGSDS 49 +++ G+I+ GD S S Sbjct: 383 NRNTLGRIMPGDDSAS 398
>tr|A8JHQ1|A8JHQ1_CHLRE DnaJ-like protein OS=Chlamydomonas reinhardtii GN=DNJ16 PE=4 SV=1 Length = 415
Score = 37.7 bits (86), Expect = 0.28 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -2
Query: 270 DDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNGK-TSLKVLS 94 DD DPLDAFM + VLPEV++ A+E R + A +G G SLK+L Sbjct: 133 DDEDPLDAFMAAEVLPEVKQRQAQEEARRQEERRKMAEQLASGKGEKGRGGALPSLKLLE 192
Query: 93 K 91 + Sbjct: 193 E 193
>tr|Q16HL1|Q16HL1_AEDAE DEAD box ATP-dependent RNA helicase OS=Aedes aegypti GN=AAEL013985 PE=3 SV=1 Length = 1029
Score = 36.2 bits (82), Expect = 0.82 Identities = 23/53 (43%), Positives = 26/53 (49%) Frame = -2
Query: 276 EEDDVDPLDAFMNSMVLPEVEKLNAEEALRAESATPPHAGPAKEKEGYATSNG 118 EEDDVDPLDAFM V EV K+N + S+ P G A G G Sbjct: 220 EEDDVDPLDAFMKE-VNEEVRKVN-----KLPSSAPKQDGKAASNSGVTIITG 266
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