BP917014
Clone id YMU001_000094_G02
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGGTAAGTCCTTGACGTATGAAGGTATTGACACAATCTCCAAGCCCCACCACAAGCGGTG
TTCAAAGTCGAAAATCGTACTTAAGCAAATACTAGAATTGTGGAGAAACTCATCTATGTA
GAAATGCGTTGTGTTAACGTATGCTCTTAGCAGATCCTTTAGCACAAGATTACGCTTTGT
AATTGTTGTAATCTGCCTATCCCCTTGGATAACTGACAATACTGAGGTGTGTTTTCCTCA
TGGTTTACAGACAGTCGTCACAGATGACTGGTGAACGGGAAATCACAGTAGTGTTTAACA
TTGGTGAAGAATCAACAATGTCCAAAATAACCATCGTGGTTAACGTGAAAAAATCCACAA
ACGCCCAAACCGAGCAATGACCTCTATTGGTGATTTATAGACTCAAAGGTAATCTCATAG
AGATAGTGCACATAAAGTGCAAAATGCTTCAT
■■Homology search results ■■ -
sp_hit_id P46572
Definition sp|P46572|SRG3_CAEEL Serpentine receptor class gamma-3 OS=Caenorhabditis elegans
Align length 46
Score (bit) 30.0
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917014|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_G02.
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P46572|SRG3_CAEEL Serpentine receptor class gamma-3 OS=Caenor... 30 4.4
sp|Q87Q30|ISPD2_VIBPA Putative 2-C-methyl-D-erythritol 4-phospha... 30 4.4
sp|Q89A98|PPID_BUCBP Putative peptidyl-prolyl cis-trans isomeras... 30 5.7

>sp|P46572|SRG3_CAEEL Serpentine receptor class gamma-3
OS=Caenorhabditis elegans GN=srg-3 PE=2 SV=1
Length = 332

Score = 30.0 bits (66), Expect = 4.4
Identities = 12/46 (26%), Positives = 29/46 (63%)
Frame = +1

Query: 61 IVLKQILELWRNSSM*KCVVLTYALSRSFSTRLRFVIVVICLSPWI 198
I +K ++ ++ + CV+ S+++S +LR +++VI L+P++
Sbjct: 110 IAIKPVIHIFIAVNRMSCVMFPVTYSQNWSQKLRIMLIVIFLAPFL 155


>sp|Q87Q30|ISPD2_VIBPA Putative 2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase 2 OS=Vibrio parahaemolyticus
GN=ispD2 PE=3 SV=1
Length = 238

Score = 30.0 bits (66), Expect = 4.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1

Query: 70 KQILELWRNSSM*KCVVLTYALSRSFSTRLRFVIVVICLSPWITDNTEVCFPHGLQTV 243
KQ LEL+ V+ Y L + + IVV+C+ PWI ++ F +Q V
Sbjct: 22 KQFLELYNKP------VIIYTLEKFEENKNIDAIVVVCVEPWIDYLRKLLFKFDIQKV 73


>sp|Q89A98|PPID_BUCBP Putative peptidyl-prolyl cis-trans isomerase D
OS=Buchnera aphidicola subsp. Baizongia pistaciae
GN=ppiD PE=5 SV=1
Length = 511

Score = 29.6 bits (65), Expect = 5.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3

Query: 182 QITTITKRNLVLKDLLRAYVNTTHFYIDEFLHNSSICLSTIF 57
+I IT N++ + LL+ YV+ HF ID + I TIF
Sbjct: 85 EIYNITLSNIIYESLLQQYVHQLHFNIDYSHVKNYIYKQTIF 126


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917014|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_G02.
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******