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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917016
Clone id YMU001_000094_G04
Library
Length 421
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000094_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATCATCGCTTATTTCTCGGCAAATAGGCCCCCATTCATCTTTGTCTAAGTTGGAAACAT
AATGTTGATCATGGCCCGGCTTCTTAAATGACATAAGAAATGGAGCTCCAAGCACACTTT
ATCCAAACATCTCAAGCCTTTTCACCAAGCCCTCAGTGCCTCAACCCACCACTCTAATGG
CTTCATTTTCCATAAATCTGCAGAGAGGAATGCGAGGAGGTTCCCCACCTCTCTTTACAA
TAAAACCCTCTACAATCTCCTCCAATATGCAACTATGAACATCCTTTCCAAACACTGTTG
GATGATCGGCAGGTTTAACACCAACTGTTGTTGCTTCAGACACGCTTTGGGCCACCAATT
CACTTTGTGTAGCATGAATATCTATGAGCTCCTCTTCTTCATGCACATCACTCAATATAT
C
■■Homology search results ■■ -
sp_hit_id A6ZVS5
Definition sp|A6ZVS5|PAN1_YEAS7 Actin cytoskeleton-regulatory complex protein PAN1 OS=Saccharomyces cerevisiae (strain YJM789)
Align length 56
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917016|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_G04.
         (421 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6ZVS5|PAN1_YEAS7 Actin cytoskeleton-regulatory complex prote...    34   0.26 
sp|Q6MD44|G6PI_PARUW Glucose-6-phosphate isomerase OS=Protochlam...    32   0.78 
sp|Q5SZK8|FREM2_HUMAN FRAS1-related extracellular matrix protein...    32   1.0  
sp|P32521|PAN1_YEAST Actin cytoskeleton-regulatory complex prote...    31   1.7  
sp|A5DHA3|NTE1_PICGU Lysophospholipase NTE1 OS=Pichia guilliermo...    31   1.7  
sp|O46256|HUNB_DROSL Protein hunchback (Fragments) OS=Drosophila...    31   2.2  
sp|Q0VC89|ZDH20_BOVIN Probable palmitoyltransferase ZDHHC20 OS=B...    29   6.6  
sp|Q6AK68|Y2529_DESPS Putative phosphotransferase DP2529 OS=Desu...    29   8.6  
sp|Q9W130|CP9C1_DROME Cytochrome P450 9c1 OS=Drosophila melanoga...    29   8.6  
sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion chann...    29   8.6  
sp|Q8K2A8|ALG3_MOUSE Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ...    29   8.6  

>sp|A6ZVS5|PAN1_YEAS7 Actin cytoskeleton-regulatory complex protein
           PAN1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PAN1
           PE=3 SV=2
          Length = 1460

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
 Frame = +3

Query: 75  PGFLNDIRNGAPSTLYPNISSLFTKPS----VPQPTTLM--ASFSINLQRGMRGGS 224
           PG    I  GAP+++ PNI+    +P     +PQ T +M   SF +NL   + GG+
Sbjct: 445 PGLNPQITGGAPASMQPNITGNALQPQTTGMMPQTTGMMPQTSFGVNLGPQLTGGA 500


>sp|Q6MD44|G6PI_PARUW Glucose-6-phosphate isomerase
           OS=Protochlamydia amoebophila (strain UWE25) GN=pgi PE=3
           SV=1
          Length = 537

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 82  KPGHDQHYVSNLDKDEWGPICREISD 5
           KPGH  H++SN+D D+   + R+I D
Sbjct: 175 KPGHHVHFISNVDPDDVAGVFRKIPD 200


>sp|Q5SZK8|FREM2_HUMAN FRAS1-related extracellular matrix protein 2
            OS=Homo sapiens GN=FREM2 PE=1 SV=2
          Length = 3169

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -1

Query: 418  ILSD-VHEEEELIDIHATQSELVAQSVSEATTVG-VKPADHPTVFGKDVHSCILEEIVEG 245
            ILSD  HE+ E   +  ++  L A       TV  V P D PTVF       + E++ E 
Sbjct: 1841 ILSDGEHEQSETFQVVLSEPVLAALEFPTVATVEIVDPGDEPTVFIPQSKYSVEEDVGEL 1900

Query: 244  FI-VKRGGE 221
            FI ++R G+
Sbjct: 1901 FIPIRRSGD 1909


>sp|P32521|PAN1_YEAST Actin cytoskeleton-regulatory complex protein
           PAN1 OS=Saccharomyces cerevisiae GN=PAN1 PE=1 SV=2
          Length = 1480

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 13/63 (20%)
 Frame = +3

Query: 75  PGFLNDIRNGAPSTLYPNISSLFTKPS----VPQPTTLM---------ASFSINLQRGMR 215
           PG    I  GAP+++ PNI+    +P     +PQ T +M          SF +NL   + 
Sbjct: 445 PGLNPQITGGAPASMQPNITGNALQPQTTGMMPQTTGMMPQTTGMMPQTSFGVNLGPQLT 504

Query: 216 GGS 224
           GG+
Sbjct: 505 GGA 507


>sp|A5DHA3|NTE1_PICGU Lysophospholipase NTE1 OS=Pichia
           guilliermondii GN=NTE1 PE=3 SV=2
          Length = 1438

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
 Frame = +3

Query: 84  LNDIRNGAPSTLYPNISSLFTKPSVPQPTTLMASFS------INLQRGMRGGSPPLFTIK 245
           LN++++GAP +   +   LFT   VP   T   S+S      + L     GG+ P  ++ 
Sbjct: 220 LNEVKSGAPLSSLMSTLDLFTSNEVPLSPTKFGSYSLTAVTPLELSPNNTGGNSPPPSLA 279

Query: 246 PSTIS 260
           P  ++
Sbjct: 280 PEIVA 284


>sp|O46256|HUNB_DROSL Protein hunchback (Fragments) OS=Drosophila
           silvestris GN=hb PE=3 SV=2
          Length = 196

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 75  PGFLNDIRNGAPSTLYPN-ISSLFTKPSVPQPTTLMASFSINLQRGMRGGSPPLFTIKPS 251
           PG  N +++  P+ L P+  ++  T P+   PTT  A+ ++     ++  +PP+    P 
Sbjct: 107 PGLPNPMQSIMPANLRPSPTATTTTTPAAAAPTTTAATIALQANDKLQALTPPMDVTPPK 166

Query: 252 TISSNMQ 272
           + + + Q
Sbjct: 167 SPAKSQQ 173


>sp|Q0VC89|ZDH20_BOVIN Probable palmitoyltransferase ZDHHC20 OS=Bos
           taurus GN=ZDHHC20 PE=2 SV=1
          Length = 365

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
 Frame = +2

Query: 269 ATMNILSKHCWMIGRFNTNCCCFRHAL------GHQFTL-CSMN 379
           + +++LS HCW++G+  T    FR  +      G+ F+L CS N
Sbjct: 223 SVLSLLSYHCWLVGKNRTTIESFRAPMFSYGTDGNGFSLGCSKN 266


>sp|Q6AK68|Y2529_DESPS Putative phosphotransferase DP2529
           OS=Desulfotalea psychrophila GN=DP2529 PE=3 SV=1
          Length = 272

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -1

Query: 403 HEEEELIDIHATQSELVAQSVSEATTVGVKPADHPTVFGKDVHSCILEE 257
           +EE +LI +  ++S     SV  AT +G+K A++P V  +D+  C L E
Sbjct: 142 YEEADLIIVGVSRSGKTPISVFLATQMGIKTANYPLV-EQDLTFCQLPE 189


>sp|Q9W130|CP9C1_DROME Cytochrome P450 9c1 OS=Drosophila
           melanogaster GN=Cyp9c1 PE=2 SV=1
          Length = 522

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -1

Query: 391 ELIDIHATQSELVAQSVSEATTVGVKPADHPTVFGKDVHSCILEEIVE----GFIVKR 230
           EL+     Q +L+A+ ++    +G KP D+ T+ G    +C++ E +      FIV R
Sbjct: 334 ELMMNPEVQEKLLAEILAVKEQLGEKPLDYDTLMGMKYLNCVVSESLRKWPPAFIVDR 391


>sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion channel
           15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1
          Length = 678

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 251 YNLLQYATMNILSKHCWMIGRFNTNCCCFRHALGHQFTLCSMNIYE 388
           YNL+ Y   + +   CW +        C+RHA   +  +C    +E
Sbjct: 244 YNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKQICQYRFFE 289
tr_hit_id A8P5M5
Definition tr|A8P5M5|A8P5M5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 53
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917016|Adiantum capillus-veneris mRNA, clone:
YMU001_000094_G04.
         (421 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8P5M5|A8P5M5_COPC7 Predicted protein OS=Coprinopsis cinerea ...    35   1.4  
tr|A7EY45|A7EY45_SCLS1 Putative uncharacterized protein OS=Scler...    35   1.4  
tr|A8L0N1|A8L0N1_FRASN Polysaccharide deacetylase OS=Frankia sp....    34   3.1  
tr|Q7YZF4|Q7YZF4_AEDAE Cholinephosphate cytidylyl transferase is...    34   4.1  
tr|Q556T2|Q556T2_DICDI Putative uncharacterized protein (Similar...    33   5.4  
tr|B4J6J9|B4J6J9_DROGR GH21752 OS=Drosophila grimshawi GN=GH2175...    33   5.4  
tr|B6M3B4|B6M3B4_BRAFL Putative uncharacterized protein OS=Branc...    33   7.0  
tr|B6P4E7|B6P4E7_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  
tr|B4L1T1|B4L1T1_DROMO GI15243 OS=Drosophila mojavensis GN=GI152...    33   9.2  

>tr|A8P5M5|A8P5M5_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05531 PE=3
           SV=1
          Length = 460

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 75  PGFLNDIRNGAPSTLYPNISSLFTKPSVPQPTTLMASFSINLQRGMRGGSPPL 233
           P  +     G  ++  P+ SS    P VP PTT +ASF  ++      G PPL
Sbjct: 244 PAMVRRSSGGVVASAIPSSSSTRASPLVPSPTTRIASFGSSVSGSPVAGQPPL 296


>tr|A7EY45|A7EY45_SCLS1 Putative uncharacterized protein
           OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
           Ss-1) GN=SS1G_10260 PE=4 SV=1
          Length = 1086

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 75  PGFLNDIRNGAPSTLYPNISSLFTKPSVP-QPTTLMASFSINLQRGMRGGSPPLFTIKPS 251
           P FL D   G P +LYPNIS + T  S P  P T    FS   +       P L  +  +
Sbjct: 135 PAFLGDADQGYPPSLYPNISYIPTTSSDPNDPGTNFTEFSYAKRPATATYEPSLHNLTKA 194

Query: 252 TI 257
           T+
Sbjct: 195 TV 196


>tr|A8L0N1|A8L0N1_FRASN Polysaccharide deacetylase OS=Frankia sp.
           (strain EAN1pec) GN=Franean1_5206 PE=4 SV=1
          Length = 259

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 361 ELVAQSVSEATTVGVKPADHPTVFGKDVHSCILEEI--VEGFIVKRGGEPPR 212
           ELV + ++E  TVG    DHPT FG    + +  EI   +  I   GG  PR
Sbjct: 120 ELVRRVLAEGHTVGNHSLDHPTPFGAGSAATVAREISAAQAIITAAGGIAPR 171


>tr|Q7YZF4|Q7YZF4_AEDAE Cholinephosphate cytidylyl transferase
           isoform B2 OS=Aedes aegypti GN=CCT PE=2 SV=1
          Length = 497

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +3

Query: 72  WPGFLNDIRNGAPSTLYPNISSLFTKPSVPQPTTLMASFSINLQRGMRGGSPPLFTIKPS 251
           WP  ++ IRNG  S   P+ SS  +KP +  PT  ++S+S  L  G+   SPP+   KP+
Sbjct: 96  WPPNVDSIRNGHVSFDTPSSSS--SKP-MTGPTVSLSSYSKQLGSGVE-HSPPVTICKPA 151

Query: 252 TISSNM 269
             S  +
Sbjct: 152 PFSDEL 157


>tr|Q556T2|Q556T2_DICDI Putative uncharacterized protein (Similar to
           Dictyostelium discoideum (Slime mold). MkpA protein)
           OS=Dictyostelium discoideum GN=DDB_0168053 PE=4 SV=1
          Length = 348

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -1

Query: 370 TQSELVAQSVSEATTVGVKPADHPTVFGKDVHSCILEEIVEGFIVKRGGEPPRIPL 203
           T+S    Q+VS +TTVGV  A   T+   ++ + I+E   E   VK+   PP  P+
Sbjct: 197 TESTTPPQTVSISTTVGVAAATTTTINKSNIETEIVEFAGERIEVKKSSPPPPKPM 252


>tr|B4J6J9|B4J6J9_DROGR GH21752 OS=Drosophila grimshawi GN=GH21752
           PE=4 SV=1
          Length = 803

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -1

Query: 382 DIHATQSELVAQSVSEATTVGVKPADHPTVFGKDVHSCILEEIVEGFIVKRGGEPPRIP 206
           D+H  QSELV + V     +G+  +D+  +  +D+  CIL +    ++   GG+P  IP
Sbjct: 160 DVHDRQSELVIKGVVYNEMIGIF-SDNSRILRRDLLKCILPDTAYHYM--NGGDPLEIP 215


>tr|B6M3B4|B6M3B4_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_77706 PE=4 SV=1
          Length = 764

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 308 GRFNTNCCCFRHALGHQFTLCSMNIYELLFFMHI 409
           G  N  CCC++HA  ++ T CS   +  LFF  I
Sbjct: 380 GSRNAYCCCYKHAEDYRRTECSQKDHLQLFFQKI 413


>tr|B6P4E7|B6P4E7_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_102592 PE=4 SV=1
          Length = 785

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 308 GRFNTNCCCFRHALGHQFTLCSMNIYELLFFMHI 409
           G  N  CCC++HA  ++ T CS   +  LFF  I
Sbjct: 386 GSRNAYCCCYKHAEDYRPTECSQKDHLQLFFQKI 419


>tr|B4L1T1|B4L1T1_DROMO GI15243 OS=Drosophila mojavensis GN=GI15243
            PE=4 SV=1
          Length = 2194

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 25/93 (26%), Positives = 40/93 (43%)
 Frame = +3

Query: 84   LNDIRNGAPSTLYPNISSLFTKPSVPQPTTLMASFSINLQRGMRGGSPPLFTIKPSTISS 263
            LN  + GAP+T    +   F  P  P P     + +   Q+ +   +P   T   +T SS
Sbjct: 1335 LNTFKFGAPTTAAKTLGFTFGAPPAPAPAPAATATAAPQQQQLSLAAPKASTALTATSSS 1394

Query: 264  NMQL*TSFPNTVG*SAGLTPTVVASDTLWATNS 362
             + L T+   TV  +   T T  A+  ++A  S
Sbjct: 1395 GLGLFTA--TTVSVAPTATTTTAAAAPIFAFGS 1425