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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917034
Clone id YMU001_000095_B04
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACACACACAGTTGCGCGCGCGTGCACACGCACACGCTAAACAGTAGTCATGTTCAACAC
TCATGAAGGCAGTCACTCGTGCTGGATGCATCATGCAAGTGTAATATAATACTTATAATA
AGTTCTCTGCAGGGTGCAGCGGTAGCTTGCTTTCTTTCCAGCTGCTAACAAAGCCTCACT
AAGGTCCTCTAACTTTATACACCCAGGATACCTACAGCTTAATCAACACTAATTGTCTTC
AACGATGGATAATTATTCATTTAACGCTTGGAGTGCTGATCGAGAGCAGGAGATAAAGAA
TGGGTGCTGGTACCAGATTCTTCCCGCCACTCTTCTGTTCCAGGAGGTTGTGCAGGGCTC
TTTCAAGCGTGTGAAGGCCAGACATTCATATGAAGCTGCTTGGTTATTTCTAAGGGTACT
TTTTGGGCCAGTTTCTCCCAGCTCAAGTCTACCTCCTACACTCGATTTTGAATTAAAACC
CG
■■Homology search results ■■ -
sp_hit_id Q9CEK0
Definition sp|Q9CEK0|OPPA1_LACLA Oligopeptide-binding protein oppA OS=Lactococcus lactis subsp. lactis
Align length 52
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917034|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_B04.
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CEK0|OPPA1_LACLA Oligopeptide-binding protein oppA OS=Lacto...    32   2.0  
sp|Q02VA9|OPPA_LACLS Oligopeptide-binding protein oppA OS=Lactoc...    30   4.4  
sp|Q07741|OPPA2_LACLA Oligopeptide-binding protein oppA OS=Lacto...    30   4.4  
sp|Q9WTR6|XCT_MOUSE Cystine/glutamate transporter OS=Mus musculu...    30   7.5  

>sp|Q9CEK0|OPPA1_LACLA Oligopeptide-binding protein oppA
           OS=Lactococcus lactis subsp. lactis GN=oppA PE=3 SV=1
          Length = 600

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 440 WEKLAQKVPLEITKQLHMNVWPSHA*KSPAQPPGTEEWREESGTSTHSLSPA 285
           W+K+  KV L   K +  N W  H       PPG+++W    G  + S  P+
Sbjct: 455 WKKIGVKVSLYHGKLMEFNSWVDHM----TTPPGSDDWDITDGAWSLSGEPS 502


>sp|Q02VA9|OPPA_LACLS Oligopeptide-binding protein oppA
           OS=Lactococcus lactis subsp. cremoris (strain SK11)
           GN=oppA PE=3 SV=1
          Length = 600

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1

Query: 440 WEKLAQKVPLEITKQLHMNVWPSHA*KSPAQPPGTEEWREESGTSTHSLSPA 285
           W+K+  KV L   K +  N W  H       PPG  +W    G+ + +  P+
Sbjct: 455 WKKIGVKVSLYNGKLMEFNSWVDHM----TTPPGANDWDITDGSWSLASEPS 502


>sp|Q07741|OPPA2_LACLA Oligopeptide-binding protein oppA
           OS=Lactococcus lactis subsp. lactis GN=oppA PE=3 SV=1
          Length = 600

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1

Query: 440 WEKLAQKVPLEITKQLHMNVWPSHA*KSPAQPPGTEEWREESGTSTHSLSPA 285
           W+K+  KV L   K +  N W  H       PPG  +W    G+ + +  P+
Sbjct: 455 WKKIGVKVSLYNGKLMEFNSWVDHM----TTPPGANDWDITDGSWSLASEPS 502


>sp|Q9WTR6|XCT_MOUSE Cystine/glutamate transporter OS=Mus musculus
           GN=Slc7a11 PE=2 SV=1
          Length = 502

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 186 PLT---LYTQDTYSLINTNCLQRWIIIHLTLGVLIESRR*RMGAGTRFFPPLF 335
           PLT   L++ D YSL+N     RW+ + L +  LI  R  R      F  PLF
Sbjct: 374 PLTMVMLFSGDLYSLLNFLSFARWLFMGLAVAGLIYLRYKRPDMHRPFKVPLF 426
tr_hit_id A9V6K0
Definition tr|A9V6K0|A9V6K0_MONBE Predicted protein OS=Monosiga brevicollis
Align length 55
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917034|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_B04.
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9V6K0|A9V6K0_MONBE Predicted protein OS=Monosiga brevicollis...    34   4.1  

>tr|A9V6K0|A9V6K0_MONBE Predicted protein OS=Monosiga brevicollis
           GN=33611 PE=4 SV=1
          Length = 3940

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   HTHSCARVHTHTLNSSHVQHS*RQSLVLDASCKCNIILIIS-SLQGAAVACFLSS 162
           HTH+    HTHT   +HV+ + R SL L  S   ++ L +S SL  +    F +S
Sbjct: 138 HTHTHTHTHTHTHTHTHVERALRFSLSLSLSLSLSLSLSLSLSLSDSIFFFFFNS 192