BP917040
Clone id YMU001_000095_B11
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTAAATATGGCCACAAATTTTGATTAGGTGGATACATGCCATGACCCAAACTAGGCAGGA
CAGTTTCCTGGGCAGTAGAGAAATCAAACAGATAATGTGTGCACACAGCCTCAAAACAAG
CTCCATCTCCCCTCGCAGCAAAAAGCTAATGTCTTGTGAGACCTCACTTGGCAGCAAACC
TTACCCCAATTGAACTTACAATGTATGGCTTTAAAATGGTACACATTTCTCACAAGTCAT
GGCTATATAATATGAGCAAGTACGAAAAACGCCCACAAAAGCCGGATCTCTTGCAAAGCA
CATATGATGCTAGCAGTACACTCCAGCCTCAAGCTCTGCCCCTCTTGAAGTCCTATCTCA
GGCACGCAAGCTTCCATTCCCACAGCTAATTGAAGTAAAGCCGCATGGCATTCAAGCTAC
TGAACCTCATCTGCAGTCATTATCTCTG
■■Homology search results ■■ -
sp_hit_id Q9UMR2
Definition sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo sapiens
Align length 69
Score (bit) 30.4
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917040|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_B11.
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo ... 30 3.5
sp|Q61655|DD19A_MOUSE ATP-dependent RNA helicase DDX19A OS=Mus m... 30 6.0
sp|Q9NUU7|DD19A_HUMAN ATP-dependent RNA helicase DDX19A OS=Homo ... 30 6.0
sp|Q3ZBV2|DD19A_BOVIN ATP-dependent RNA helicase DDX19A OS=Bos t... 30 6.0

>sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo
sapiens GN=DDX19B PE=1 SV=1
Length = 479

Score = 30.4 bits (67), Expect = 3.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3

Query: 153 LVRPHLAANLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTY----DASST 320
L+R +L N +E+ + S LY++ +E+ KP LLQ Y + S
Sbjct: 65 LIRSNLVDNTNQVEV-------LQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSK 117

Query: 321 LQPQALPLL 347
+Q ALPL+
Sbjct: 118 IQENALPLM 126


>sp|Q61655|DD19A_MOUSE ATP-dependent RNA helicase DDX19A OS=Mus
musculus GN=Ddx19a PE=1 SV=1
Length = 478

Score = 29.6 bits (65), Expect = 6.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3

Query: 153 LVRPHLAANLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTY----DASST 320
L+R +L N +E+ + S LY++ +E+ KP LLQ Y + S
Sbjct: 64 LIRSNLVDNTNQVEV-------LQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSK 116

Query: 321 LQPQALPLL 347
+Q ALP++
Sbjct: 117 IQENALPMM 125


>sp|Q9NUU7|DD19A_HUMAN ATP-dependent RNA helicase DDX19A OS=Homo
sapiens GN=DDX19A PE=1 SV=1
Length = 478

Score = 29.6 bits (65), Expect = 6.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3

Query: 153 LVRPHLAANLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTY----DASST 320
L+R +L N +E+ + S LY++ +E+ KP LLQ Y + S
Sbjct: 64 LIRSNLVDNTNQVEV-------LQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSK 116

Query: 321 LQPQALPLL 347
+Q ALP++
Sbjct: 117 IQENALPMM 125


>sp|Q3ZBV2|DD19A_BOVIN ATP-dependent RNA helicase DDX19A OS=Bos
taurus GN=DDX19A PE=2 SV=1
Length = 478

Score = 29.6 bits (65), Expect = 6.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3

Query: 153 LVRPHLAANLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTY----DASST 320
L+R +L N +E+ + S LY++ +E+ KP LLQ Y + S
Sbjct: 64 LIRSNLVDNTNQVEV-------LQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSK 116

Query: 321 LQPQALPLL 347
+Q ALP++
Sbjct: 117 IQENALPMM 125


tr_hit_id A5WGJ2
Definition tr|A5WGJ2|A5WGJ2_PSYWF Peptidase M16C associated domain protein OS=Psychrobacter sp. (strain PRwf-1)
Align length 79
Score (bit) 34.3
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917040|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_B11.
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5WGJ2|A5WGJ2_PSYWF Peptidase M16C associated domain protein ... 34 3.1
tr|Q1DIL6|Q1DIL6_COCIM Predicted protein OS=Coccidioides immitis... 33 5.3

>tr|A5WGJ2|A5WGJ2_PSYWF Peptidase M16C associated domain protein
OS=Psychrobacter sp. (strain PRwf-1) GN=PsycPRwf_1843
PE=3 SV=1
Length = 1032

Score = 34.3 bits (77), Expect = 3.1
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3

Query: 168 LAANLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTYDASS---TLQPQAL 338
L + L EL+ F+ + +H S + P+ PD L S + ++ + +P+A+
Sbjct: 610 LISELGTDELSARDFQALQAAHSSGVTARVSQRTSPKDPDSLSSYFVVATRALSRKPEAI 669

Query: 339 PLLKSYLRHASFHSHS*LK 395
L+K L H+ F H +K
Sbjct: 670 DLVKQVLEHSIFTEHDRIK 688


>tr|Q1DIL6|Q1DIL6_COCIM Predicted protein OS=Coccidioides immitis
GN=CIMG_09847 PE=4 SV=1
Length = 366

Score = 33.5 bits (75), Expect = 5.3
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3

Query: 177 NLTPIELTMYGFKMVHISHKSWLYNMSKYEKRPQKPDLLQSTYDASSTLQPQ 332
N T I + + F VH ++ +WL NM K + KP++L +S L PQ
Sbjct: 61 NTTGISTSEWNF--VHDNYSNWLANMGKENIKMNKPEILLLESTTASNLSPQ 110