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NBDC - LSDB Archive
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BP917042
Clone id YMU001_000095_C01
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGGCTCCTCGGGAACTGGAGCTATATCCAAGCATGCCACATCACCAGTCATATCACGCTT
ATCAACCTCCATCAGCTGTCCAGTTAAATCCATCTCAAAATAGATAAGCTCTCCTCCACT
CAGAGCAATCACAACTTGCATTCTGTTGTAGCCCACTTTCACAATTGTCTTCTTTCCAGG
TGTCTTCCACTCATTTATACGAGCATCTGCCCTGATATGCCTAATCCCATTAGGATGTAC
CTGCATCAGAGAATCTTCACCAAGAAGAGAGACTGCCAATGACGGTGTTGTATCTAGAAA
GCCACTATCATTTACTTCCTCTACTGTCTCACCGATAGAAAGGACAAGGGTAGCATTCGT
GAAGGACACCACAATATATGCATCAAATTCGTCATTGACACTCTTTTTCACCGTCCAAAC
TGCACTTGGGAGACCGGGGAGTGCAGAAACGGCCATTTCAGTGACAGCCAATCCTGGCCT
GAGAACACGTAATGACGAC
■■Homology search results ■■ -
sp_hit_id Q921M3
Definition sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus musculus
Align length 164
Score (bit) 235.0
E-value 8.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917042|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C01.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus muscul...   235   8e-62
sp|Q15393|SF3B3_HUMAN Splicing factor 3B subunit 3 OS=Homo sapie...   235   8e-62
sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3 OS=Bos taurus...   235   8e-62
sp|Q1LVE8|SF3B3_DANRE Splicing factor 3B subunit 3 OS=Danio reri...   234   2e-61
sp|Q5RBI5|SF3B3_PONAB Splicing factor 3B subunit 3 OS=Pongo abel...   233   4e-61
sp|Q4WLI5|RSE1_ASPFU Pre-mRNA-splicing factor rse1 OS=Aspergillu...   199   6e-51
sp|Q5B1X8|RSE1_EMENI Pre-mRNA-splicing factor rse1 OS=Emericella...   196   7e-50
sp|Q7RYR4|RSE1_NEUCR Pre-mRNA-splicing factor rse-1 OS=Neurospor...   191   2e-48
sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3 OS=D...   189   6e-48
sp|Q52E49|RSE1_MAGGR Pre-mRNA-splicing factor RSE1 OS=Magnaporth...   187   3e-47
sp|Q5KP25|RSE1_CRYNE Pre-mRNA-splicing factor RSE1 OS=Cryptococc...   182   8e-46
sp|Q4PGM6|RSE1_USTMA Pre-mRNA-splicing factor RSE1 OS=Ustilago m...   175   1e-43
sp|Q9UTT2|RSE1_SCHPO Pre-mRNA-splicing factor rse1 OS=Schizosacc...   169   9e-42
sp|Q6BYK1|RSE1_DEBHA Pre-mRNA-splicing factor RSE1 OS=Debaryomyc...   102   8e-22
sp|Q5A7S5|RSE1_CANAL Pre-mRNA-splicing factor RSE1 OS=Candida al...   100   5e-21
sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidops...    95   2e-19
sp|O49552|DDB1B_ARATH DNA damage-binding protein 1b OS=Arabidops...    92   1e-18
sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lyc...    89   9e-18
sp|Q6E7D1|DDB1_SOLCE DNA damage-binding protein 1 OS=Solanum che...    89   9e-18
sp|Q5R649|DDB1_PONAB DNA damage-binding protein 1 OS=Pongo abeli...    86   7e-17
sp|Q16531|DDB1_HUMAN DNA damage-binding protein 1 OS=Homo sapien...    86   7e-17
sp|P33194|DDB1_CERAE DNA damage-binding protein 1 OS=Cercopithec...    86   7e-17
sp|Q9ESW0|DDB1_RAT DNA damage-binding protein 1 OS=Rattus norveg...    86   1e-16
sp|A1A4K3|DDB1_BOVIN DNA damage-binding protein 1 OS=Bos taurus ...    86   1e-16
sp|Q805F9|DDB1_CHICK DNA damage-binding protein 1 OS=Gallus gall...    86   1e-16
sp|Q3U1J4|DDB1_MOUSE DNA damage-binding protein 1 OS=Mus musculu...    84   5e-16
sp|Q9XYZ5|DDB1_DROME DNA damage-binding protein 1 OS=Drosophila ...    84   5e-16
sp|Q6P6Z0|DDB1_XENLA DNA damage-binding protein 1 OS=Xenopus lae...    81   3e-15
sp|Q6CAH5|RSE1_YARLI Pre-mRNA-splicing factor RSE1 OS=Yarrowia l...    63   7e-10
sp|Q753D4|RSE1_ASHGO Pre-mRNA-splicing factor RSE1 OS=Ashbya gos...    59   1e-08

>sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus musculus
           GN=Sf3b3 PE=2 SV=1
          Length = 1217

 Score =  235 bits (600), Expect = 8e-62
 Identities = 116/164 (70%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLRVLR GL V+EMAVS LPG P+AVWTV++ + DEFDAYI+VSF NATLVLSIGETVE
Sbjct: 433 SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVE 492

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV DSGFL TTP+L+ SLLG+D+L+QV+P+GIRHIRAD R+NEWKTPGKKTIVK   N+ 
Sbjct: 493 EVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQR 552

Query: 138 QVVIALSGGELIYFEMDLTGQLME-VDKRDMTGDVACLDIAPVP 10
           QVVIAL+GGEL+YFEMD +GQL E  ++++M+ DV C+ +A VP
Sbjct: 553 QVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596


>sp|Q15393|SF3B3_HUMAN Splicing factor 3B subunit 3 OS=Homo sapiens
           GN=SF3B3 PE=1 SV=4
          Length = 1217

 Score =  235 bits (600), Expect = 8e-62
 Identities = 116/164 (70%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLRVLR GL V+EMAVS LPG P+AVWTV++ + DEFDAYI+VSF NATLVLSIGETVE
Sbjct: 433 SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVE 492

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV DSGFL TTP+L+ SLLG+D+L+QV+P+GIRHIRAD R+NEWKTPGKKTIVK   N+ 
Sbjct: 493 EVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQR 552

Query: 138 QVVIALSGGELIYFEMDLTGQLME-VDKRDMTGDVACLDIAPVP 10
           QVVIAL+GGEL+YFEMD +GQL E  ++++M+ DV C+ +A VP
Sbjct: 553 QVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596


>sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3 OS=Bos taurus
           GN=SF3B3 PE=2 SV=1
          Length = 1217

 Score =  235 bits (600), Expect = 8e-62
 Identities = 116/164 (70%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLRVLR GL V+EMAVS LPG P+AVWTV++ + DEFDAYI+VSF NATLVLSIGETVE
Sbjct: 433 SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVE 492

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV DSGFL TTP+L+ SLLG+D+L+QV+P+GIRHIRAD R+NEWKTPGKKTIVK   N+ 
Sbjct: 493 EVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQR 552

Query: 138 QVVIALSGGELIYFEMDLTGQLME-VDKRDMTGDVACLDIAPVP 10
           QVVIAL+GGEL+YFEMD +GQL E  ++++M+ DV C+ +A VP
Sbjct: 553 QVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596


>sp|Q1LVE8|SF3B3_DANRE Splicing factor 3B subunit 3 OS=Danio rerio
           GN=sf3b3 PE=2 SV=1
          Length = 1217

 Score =  234 bits (597), Expect = 2e-61
 Identities = 115/164 (70%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+LRVLR GL V+EMAVS LPG P+AVWTV++ V DEFDAYI+VSF NATLVLSIGETVE
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVE 492

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV DSGFL TTP+L+ SLLGED+L+QV+P+GIRHIRAD R+NEWKTPGKKTI++   N+ 
Sbjct: 493 EVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPGKKTIIRCAVNQR 552

Query: 138 QVVIALSGGELIYFEMDLTGQLME-VDKRDMTGDVACLDIAPVP 10
           QVVIAL+GGEL+YFEMD +GQL E  ++++M+ DV C+ +A VP
Sbjct: 553 QVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596


>sp|Q5RBI5|SF3B3_PONAB Splicing factor 3B subunit 3 OS=Pongo abelii
           GN=SF3B3 PE=2 SV=1
          Length = 1217

 Score =  233 bits (594), Expect = 4e-61
 Identities = 115/164 (70%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLRVLR GL V+E AVS LPG P+AVWTV++ + DEFDAYI+VSF NATLVLSIGETVE
Sbjct: 433 SSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVE 492

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV DSGFL TTP+L+ SLLG+D+L+QV+P+GIRHIRAD R+NEWKTPGKKTIVK   N+ 
Sbjct: 493 EVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQR 552

Query: 138 QVVIALSGGELIYFEMDLTGQLME-VDKRDMTGDVACLDIAPVP 10
           QVVIAL+GGEL+YFEMD +GQL E  ++++M+ DV C+ +A VP
Sbjct: 553 QVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596


>sp|Q4WLI5|RSE1_ASPFU Pre-mRNA-splicing factor rse1 OS=Aspergillus
           fumigatus GN=rse1 PE=3 SV=1
          Length = 1225

 Score =  199 bits (506), Expect = 6e-51
 Identities = 100/165 (60%), Positives = 119/165 (72%), Gaps = 1/165 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SS R L+ GL V+E+  S LP +PSAVWT K +  DEFDAYI++SF N TLVLSIGETVE
Sbjct: 449 SSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVE 508

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV D+GFL T P+LAV  LGEDSL+QVHP GIRHI AD R+NEW  P  ++IV    N  
Sbjct: 509 EVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHILADRRVNEWPAPQHRSIVAAATNER 568

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVD-KRDMTGDVACLDIAPVPE 7
           QV +ALS GE++YFEMD  G L E D +R M+G V CL +  VPE
Sbjct: 569 QVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCLSLGEVPE 613


>sp|Q5B1X8|RSE1_EMENI Pre-mRNA-splicing factor rse1 OS=Emericella
           nidulans GN=rse1 PE=3 SV=1
          Length = 1226

 Score =  196 bits (497), Expect = 7e-50
 Identities = 97/165 (58%), Positives = 119/165 (72%), Gaps = 1/165 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+ R L+ GL V+E+  S LP +PSAVWT K +  DEFDAYIV+SF N TLVLSIGETVE
Sbjct: 449 STFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEFDAYIVLSFANGTLVLSIGETVE 508

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV D+GFL + P+LAV  LGEDSL+Q+HP GIRHI AD R+NEW  P  ++IV    N  
Sbjct: 509 EVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHILADRRVNEWPAPQHRSIVAAATNER 568

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVD-KRDMTGDVACLDIAPVPE 7
           QV +ALS GE++YFE+D  G L E D +R M+G V CL +  VPE
Sbjct: 569 QVAVALSSGEIVYFELDADGSLAEYDERRQMSGTVTCLSLGEVPE 613


>sp|Q7RYR4|RSE1_NEUCR Pre-mRNA-splicing factor rse-1 OS=Neurospora
           crassa GN=rse-1 PE=3 SV=2
          Length = 1209

 Score =  191 bits (484), Expect = 2e-48
 Identities = 98/165 (59%), Positives = 120/165 (72%), Gaps = 1/165 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+ R+L+ GL V+E+  S LPG PSAVWT K +  D++DAYIV+SFTN TLVLSIGETVE
Sbjct: 452 STFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIGETVE 511

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFL T P+LAV  +GED L+QVHP GIRHI    R+NEW  P  ++IV    N  
Sbjct: 512 EVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI-VQGRVNEWPAPQHRSIVAATANEN 570

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVD-KRDMTGDVACLDIAPVPE 7
           QVVIALS GE++YFEMD  G L E D K++M+G V  L +  VPE
Sbjct: 571 QVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTSLSVGQVPE 615


>sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3
           OS=Dictyostelium discoideum GN=sf3b3 PE=3 SV=1
          Length = 1256

 Score =  189 bits (480), Expect = 6e-48
 Identities = 87/168 (51%), Positives = 127/168 (75%), Gaps = 4/168 (2%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVN----DEFDAYIVVSFTNATLVLSIG 331
           SSL+VLR GL+VT +  + LPG+PS +WTV KS +    D+ D YIVVSF   T VLS+G
Sbjct: 446 SSLKVLRHGLSVTTITTANLPGVPSGIWTVPKSTSPNAIDQTDKYIVVSFVGTTSVLSVG 505

Query: 330 ETVEEVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVG 151
           +T++E ++SG L+TT +L V  +G+D+++QV P G RHI++D RINEW+ PG+KTIV+  
Sbjct: 506 DTIQENHESGILETTTTLLVKSMGDDAIIQVFPTGFRHIKSDLRINEWRAPGRKTIVRAS 565

Query: 150 YNRMQVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
            N+ Q+ IALSGGE+IYFE+D    L+E+ K+D+  D+AC++I+P+P+
Sbjct: 566 ANQSQLAIALSGGEIIYFELDQASNLIEIIKKDLRRDIACIEISPIPK 613


>sp|Q52E49|RSE1_MAGGR Pre-mRNA-splicing factor RSE1 OS=Magnaporthe
           grisea GN=RSE1 PE=3 SV=2
          Length = 1216

 Score =  187 bits (474), Expect = 3e-47
 Identities = 95/165 (57%), Positives = 119/165 (72%), Gaps = 1/165 (0%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+ R+L+ GL V E+  S LPG PSAVWT K   +DE+DAYIV+SFTN TLVLSIGETVE
Sbjct: 452 STFRMLKHGLEVNEIVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIGETVE 511

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+D+GFL + P+LAV  LG+D L+QVHP GIRHIR +  +NEW +P  ++IV    N  
Sbjct: 512 EVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHIR-NGVVNEWSSPQHRSIVAAATNER 570

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVD-KRDMTGDVACLDIAPVPE 7
           QV +ALS GE++YFEMD  G L E D K++M G V  L +  VPE
Sbjct: 571 QVAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTVTSLSLGEVPE 615
tr_hit_id A9TZV4
Definition tr|A9TZV4|A9TZV4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 164
Score (bit) 303.0
E-value 4.0e-81
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917042|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C01.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TZV4|A9TZV4_PHYPA Predicted protein OS=Physcomitrella paten...   303   4e-81
tr|A9T9F4|A9T9F4_PHYPA Predicted protein OS=Physcomitrella paten...   301   9e-81
tr|A9TB22|A9TB22_PHYPA Predicted protein OS=Physcomitrella paten...   300   2e-80
tr|Q9LD60|Q9LD60_ARATH Spliceosomal-like protein OS=Arabidopsis ...   292   5e-78
tr|A7Q438|A7Q438_VITVI Chromosome chr13 scaffold_48, whole genom...   288   8e-77
tr|Q6YXY3|Q6YXY3_ORYSJ Putative splicing factor 3b, subunit 3, 1...   271   1e-71
tr|Q0E445|Q0E445_ORYSJ Os02g0137400 protein (Fragment) OS=Oryza ...   271   1e-71
tr|A4Q7M2|A4Q7M2_MEDTR CPSF A subunit, C-terminal; WD40-like OS=...   271   1e-71
tr|A3A2Y3|A3A2Y3_ORYSJ Putative uncharacterized protein OS=Oryza...   271   1e-71
tr|A2X0N5|A2X0N5_ORYSI Putative uncharacterized protein OS=Oryza...   271   1e-71
tr|A5AK38|A5AK38_VITVI Putative uncharacterized protein OS=Vitis...   254   2e-66
tr|B5DF12|B5DF12_RAT Sf3b3 protein (Fragment) OS=Rattus norvegic...   235   8e-61
tr|B2RSV4|B2RSV4_MOUSE Splicing factor 3b, subunit 3 OS=Mus musc...   235   8e-61
tr|B3KQH1|B3KQH1_HUMAN cDNA FLJ90452 fis, clone NT2RP3001475, hi...   235   8e-61
tr|A8K6V3|A8K6V3_HUMAN cDNA FLJ78677, highly similar to Homo sap...   235   8e-61
tr|B6NA17|B6NA17_BRAFL Putative uncharacterized protein OS=Branc...   234   1e-60
tr|B6M1T8|B6M1T8_BRAFL Putative uncharacterized protein (Fragmen...   234   1e-60
tr|Q4T237|Q4T237_TETNG Chromosome undetermined SCAF10345, whole ...   233   3e-60
tr|B0WIA3|B0WIA3_CULQU Splicing factor 3B subunit 3 OS=Culex qui...   228   1e-58
tr|Q7Q722|Q7Q722_ANOGA AGAP005549-PA OS=Anopheles gambiae GN=AGA...   228   2e-58
tr|Q17HE5|Q17HE5_AEDAE Spliceosomal protein sap OS=Aedes aegypti...   228   2e-58
tr|A7RHF3|A7RHF3_NEMVE Predicted protein OS=Nematostella vectens...   222   7e-57
tr|A4RYT7|A4RYT7_OSTLU Predicted protein OS=Ostreococcus lucimar...   221   2e-56
tr|B4LGJ1|B4LGJ1_DROVI GJ13230 OS=Drosophila virilis GN=GJ13230 ...   220   3e-56
tr|B4L0C3|B4L0C3_DROMO GI12293 OS=Drosophila mojavensis GN=GI122...   220   3e-56
tr|B4J2R0|B4J2R0_DROGR GH16029 OS=Drosophila grimshawi GN=GH1602...   220   3e-56
tr|B4MLD0|B4MLD0_DROWI GK16677 OS=Drosophila willistoni GN=GK166...   219   4e-56
tr|Q9W0M7|Q9W0M7_DROME CG13900, isoform A OS=Drosophila melanoga...   219   6e-56
tr|Q5BI86|Q5BI86_DROME RE01065p OS=Drosophila melanogaster GN=CG...   219   6e-56
tr|B4QLF5|B4QLF5_DROSI GD13507 OS=Drosophila simulans GN=GD13507...   219   6e-56

>tr|A9TZV4|A9TZV4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_227044 PE=4 SV=1
          Length = 1214

 Score =  303 bits (775), Expect = 4e-81
 Identities = 149/164 (90%), Positives = 159/164 (96%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLR+LRPGLAVTEMAVS LPG+PSAVWTVKK  NDEFDAYIVVSF NATLVLSIGETVE
Sbjct: 432 SSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVE 491

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFLDTTPSLA+SLLG+DSLMQVHP+GIRHIRAD RINEWKTPGKKTIVKVGYNRM
Sbjct: 492 EVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGRINEWKTPGKKTIVKVGYNRM 551

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD++GQLME++KRDMTGDVACLDIAPVPE
Sbjct: 552 QVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIAPVPE 595


>tr|A9T9F4|A9T9F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168774 PE=4 SV=1
          Length = 1201

 Score =  301 bits (772), Expect = 9e-81
 Identities = 148/164 (90%), Positives = 159/164 (96%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLR+LRPGLAVTEMAVS LPG+PSAVWTVKK  NDEFDAYIVVSF NATLVLSIGETVE
Sbjct: 419 SSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVE 478

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFLDTTPSLA+SLLG+DSLMQVHP+GIRHIR+D RINEWKTPGKKTIVKVGYNRM
Sbjct: 479 EVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRSDGRINEWKTPGKKTIVKVGYNRM 538

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD++GQLME++KRDMTGDVACLDIAPVPE
Sbjct: 539 QVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIAPVPE 582


>tr|A9TB22|A9TB22_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90420 PE=4 SV=1
          Length = 1214

 Score =  300 bits (768), Expect = 2e-80
 Identities = 148/164 (90%), Positives = 158/164 (96%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLR+LRPGLAVTEMAVS LPG+PSAVWTVKK  NDEFDAYIVVSF NATLVLSIGETVE
Sbjct: 432 SSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVE 491

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFLDTTPSLA+SLLG+DSLMQVHP+GIRHIRAD RINEWKTPGKKTIVKVGYNRM
Sbjct: 492 EVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGRINEWKTPGKKTIVKVGYNRM 551

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD++GQLME++KRDMTGDVACL IAPVPE
Sbjct: 552 QVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLHIAPVPE 595


>tr|Q9LD60|Q9LD60_ARATH Spliceosomal-like protein OS=Arabidopsis
           thaliana GN=T26I12.100 PE=4 SV=1
          Length = 1214

 Score =  292 bits (748), Expect = 5e-78
 Identities = 143/164 (87%), Positives = 157/164 (95%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLR+LRPGLA+TEMAVS LPG PSAVWTVKK+V+DEFDAYIVVSFTNATLVLSIGE VE
Sbjct: 431 SSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVE 490

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EVNDSGFLDTTPSLAVSL+G+DSLMQVHPNGIRHIR D RINEW+TPGK++IVKVGYNR+
Sbjct: 491 EVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRL 550

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFE D+TGQLMEV+K +M+GDVACLDIAPVPE
Sbjct: 551 QVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPE 594


>tr|A7Q438|A7Q438_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029524001
           PE=4 SV=1
          Length = 1201

 Score =  288 bits (738), Expect = 8e-77
 Identities = 140/164 (85%), Positives = 158/164 (96%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SS+R+LRPGLA++EMAVS LPG+PSAVWTVKK+VNDEFDAYIVVSF NATLVLSIGETVE
Sbjct: 431 SSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVE 490

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFLDTTPSLAVSL+G+DSLMQVHP+GIRHIR D RINEW+TPGK+TIVKVG NR+
Sbjct: 491 EVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRL 550

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFE+D+TGQLMEV+K +M+GDVACLDIAPVPE
Sbjct: 551 QVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPE 594


>tr|Q6YXY3|Q6YXY3_ORYSJ Putative splicing factor 3b, subunit 3,
           130kDa OS=Oryza sativa subsp. japonica
           GN=OSJNBa0026E05.6 PE=4 SV=1
          Length = 1234

 Score =  271 bits (693), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+LR+LRPGLA++EMA S LP  P AVWTVKK++ND FDAYIVVSF N TLVLSIGET+E
Sbjct: 447 STLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIE 506

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DS FLDTT SLAVSLLGEDSLMQVHPNGIRHIR D R+NEW+TPGKKTI KVG NR+
Sbjct: 507 EVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRL 566

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD+TGQLMEV+K+DM+GDVACL IAPVPE
Sbjct: 567 QVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPE 610


>tr|Q0E445|Q0E445_ORYSJ Os02g0137400 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os02g0137400 PE=4 SV=1
          Length = 858

 Score =  271 bits (693), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+LR+LRPGLA++EMA S LP  P AVWTVKK++ND FDAYIVVSF N TLVLSIGET+E
Sbjct: 71  STLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIE 130

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DS FLDTT SLAVSLLGEDSLMQVHPNGIRHIR D R+NEW+TPGKKTI KVG NR+
Sbjct: 131 EVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRL 190

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD+TGQLMEV+K+DM+GDVACL IAPVPE
Sbjct: 191 QVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPE 234


>tr|A4Q7M2|A4Q7M2_MEDTR CPSF A subunit, C-terminal; WD40-like
           OS=Medicago truncatula GN=MtrDRAFT_AC182813g2v2 PE=4
           SV=1
          Length = 1225

 Score =  271 bits (693), Expect = 1e-71
 Identities = 132/164 (80%), Positives = 152/164 (92%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           SSLR++R GLAV+EMAVS LPG+PSAVWTVKK+V DEFDAYIVVSFTNATLVLSIGET +
Sbjct: 442 SSLRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNVMDEFDAYIVVSFTNATLVLSIGETAD 501

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DSGFLDT PSLAVSL+G+DSLMQVHPNGIRHIR D R NEW+T GK+TI KVG NR+
Sbjct: 502 EVSDSGFLDTAPSLAVSLIGDDSLMQVHPNGIRHIREDGRTNEWQTSGKRTIAKVGSNRL 561

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIAL+GGELIYFE+D+TGQLMEV++ +M+GDVACLDIAPVP+
Sbjct: 562 QVVIALNGGELIYFEVDVTGQLMEVERHEMSGDVACLDIAPVPK 605


>tr|A3A2Y3|A3A2Y3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005155 PE=4 SV=1
          Length = 1224

 Score =  271 bits (693), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+LR+LRPGLA++EMA S LP  P AVWTVKK++ND FDAYIVVSF N TLVLSIGET+E
Sbjct: 437 STLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIE 496

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DS FLDTT SLAVSLLGEDSLMQVHPNGIRHIR D R+NEW+TPGKKTI KVG NR+
Sbjct: 497 EVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRL 556

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD+TGQLMEV+K+DM+GDVACL IAPVPE
Sbjct: 557 QVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPE 600


>tr|A2X0N5|A2X0N5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05771 PE=4 SV=1
          Length = 1234

 Score =  271 bits (693), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 498 SSLRVLRPGLAVTEMAVSALPGLPSAVWTVKKSVNDEFDAYIVVSFTNATLVLSIGETVE 319
           S+LR+LRPGLA++EMA S LP  P AVWTVKK++ND FDAYIVVSF N TLVLSIGET+E
Sbjct: 447 STLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIE 506

Query: 318 EVNDSGFLDTTPSLAVSLLGEDSLMQVHPNGIRHIRADARINEWKTPGKKTIVKVGYNRM 139
           EV+DS FLDTT SLAVSLLGEDSLMQVHPNGIRHIR D R+NEW+TPGKKTI KVG NR+
Sbjct: 507 EVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRL 566

Query: 138 QVVIALSGGELIYFEMDLTGQLMEVDKRDMTGDVACLDIAPVPE 7
           QVVIALSGGELIYFEMD+TGQLMEV+K+DM+GDVACL IAPVPE
Sbjct: 567 QVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPE 610