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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917045
Clone id YMU001_000095_C04
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCTTAGTCTTAGAAGTGGCCTTGTGAGCCTAGTCCACCTTGATCTCACCCTAATCACCCA
AGGAGTGGTCAAATCCGAACTATTTGCAGATAATTAAGTCATAGCTTATGCACCTTCTTC
GAAGCTCTACCCACATAATTAGCCTCTTCTTCACCATACTGTGTACTTTCTTGTTAAGTA
AACTTTGCCTTTTTATAACCTCAATCCGCTTGGTACATATTTAGTGTGTATATATATACT
GTACCTTTATAACCCATTTTGTAATTTTGAGTCGATTCCTGATTGTCCCCGTCAACTCCT
CAAGGCCTATAATACCTACGATATCTCTAGATGCATCTCGATCCTGTCACCCATGTTGTC
CCCTTCCACTTAGTAAGTGCCAAAATTTGTGCTTGCTATCGCCCCAATTCTATAAATCAG
TCATGTTATTTGTTGATGTCTTTGGCAATCGACACAGGCTAATAAAAGCTTTAT
■■Homology search results ■■ -
sp_hit_id Q10325
Definition sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2 OS=Schizosaccharomyces pombe
Align length 21
Score (bit) 30.8
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917045|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C04.
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2 OS=Schizosac...    31   3.2  
sp|P16718|VA28_SHEVK Viral replication protein A28-like OS=Sheep...    30   4.2  
sp|Q8JTR0|VA28_LSDV Viral replication protein A28-like OS=Lumpy ...    30   4.2  
sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcriptio...    30   7.1  
sp|B2X1Z4|RPOC2_OEDCA DNA-directed RNA polymerase subunit beta''...    29   9.3  
sp|P73662|PTA_SYNY3 Phosphate acetyltransferase OS=Synechocystis...    29   9.3  
sp|P32739|NAD2_CAEEL Sodium-dependent high-affinity dicarboxylat...    29   9.3  
sp|P68502|MTB_SALAL Metallothionein B OS=Salvelinus alpinus GN=m...    29   9.3  
sp|P68501|MTB_ONCMY Metallothionein B OS=Oncorhynchus mykiss GN=...    29   9.3  

>sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2
           OS=Schizosaccharomyces pombe GN=mst2 PE=2 SV=1
          Length = 407

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 378 CQNLCLLSPQFYKSVMLFVDV 440
           CQNLCLL+  F  S ML+ DV
Sbjct: 184 CQNLCLLAKMFLHSKMLYYDV 204


>sp|P16718|VA28_SHEVK Viral replication protein A28-like OS=Sheeppox
           virus (strain KS-1) GN=HM3 PE=3 SV=1
          Length = 140

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 209 LGTYLVCIYILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILS 349
           L T  VCI I  LY+ + N+++I    ++   A++ ++ S+ ++ LS
Sbjct: 11  LSTVAVCIIIFQLYSIYLNYDNI----KEFNSAHSAFEFSKSVNTLS 53


>sp|Q8JTR0|VA28_LSDV Viral replication protein A28-like OS=Lumpy
           skin disease virus GN=LSDV118 PE=3 SV=2
          Length = 140

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 209 LGTYLVCIYILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILS 349
           L T  VCI I  LY+ + N+++I    ++   A++ ++ S+ ++ LS
Sbjct: 11  LSTVAVCIIIFQLYSIYLNYDNI----KEFNSAHSAFEFSKSVNTLS 53


>sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcription
           subunit 26 OS=Drosophila pseudoobscura pseudoobscura
           GN=MED26 PE=3 SV=2
          Length = 1602

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = +3

Query: 264 ILSRFLIVPVNSSRPIIPTISLDASRSCHPCCPLPLSKCQNLCLLSPQFYKS-----VML 428
           I SR LI  V S    I   S+    +     P P S C +  + SPQ  ++      ++
Sbjct: 516 IQSRKLITAVQSPTSNISNSSISRELTTRALMPRPTSSCSDTSIHSPQIMETYSGNVTLM 575

Query: 429 FVDVFGNRH 455
            VD F N++
Sbjct: 576 GVDKFSNKN 584


>sp|B2X1Z4|RPOC2_OEDCA DNA-directed RNA polymerase subunit beta''
            OS=Oedogonium cardiacum GN=rpoC2 PE=3 SV=1
          Length = 2617

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
 Frame = +2

Query: 23   VSLVHLDLTLITQGVVKSELFADN*VIAYAPSSKLYPHN*PLLHHTVYFLVK*TLPFYNL 202
            V L +  LTL  +  + ++ +  N + +Y+  ++ +PH    L+H            +N 
Sbjct: 800  VKLKYHSLTLKKKKGLSNQFYTYNCMNSYSSETRYFPHTSCFLNH------------FNN 847

Query: 203  NPLGTYLVCIY--ILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILSPMLSPS 367
              +  YL   Y  I + + PF        C +Q L  ++  +  +    LS +L P+
Sbjct: 848  EKINKYLNTNYSLIFFYFRPFI------QCEKQQLSQFHYINNKKYFDNLSLLLKPT 898


>sp|P73662|PTA_SYNY3 Phosphate acetyltransferase OS=Synechocystis
           sp. (strain PCC 6803) GN=pta PE=3 SV=1
          Length = 697

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 269 ESIPDCPRQLLKAYNTYDISRCISILSPMLSPS 367
           E +PD P  LL + +T++ S  +  L P LSP+
Sbjct: 305 EGLPDAPPLLLTSTHTHETSARLETLHPALSPT 337


>sp|P32739|NAD2_CAEEL Sodium-dependent high-affinity dicarboxylate
           transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2
           SV=3
          Length = 551

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 129 THIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCTFITHFVILSRFLIVPVNSSRP 308
           T +IS+   I+C FLL+  C+ ITS+ +      + Y  F  + +     +I   NSS P
Sbjct: 495 TKVISMVEMIVCGFLLNIACILITSLNM----NTWTYFIFSLN-IFPENIVISSENSSYP 549

Query: 309 I 311
           +
Sbjct: 550 V 550


>sp|P68502|MTB_SALAL Metallothionein B OS=Salvelinus alpinus GN=mtb
           PE=3 SV=1
          Length = 60

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 RSCHPCCPLPLSKCQNLCL 395
           +SC PCCP   SKC + C+
Sbjct: 30  KSCCPCCPSDCSKCASGCV 48


>sp|P68501|MTB_ONCMY Metallothionein B OS=Oncorhynchus mykiss GN=mtb
           PE=3 SV=1
          Length = 60

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 RSCHPCCPLPLSKCQNLCL 395
           +SC PCCP   SKC + C+
Sbjct: 30  KSCCPCCPSDCSKCASGCV 48
tr_hit_id Q4YFK5
Definition tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei
Align length 85
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917045|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C04.
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragmen...    35   1.9  
tr|A7S9B8|A7S9B8_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   4.2  
tr|Q4AED0|Q4AED0_SIPCU Hypotaurocyamine kinase OS=Siphonosoma cu...    33   5.4  
tr|A7RAB9|A7RAB9_MESMA NADH-ubiquinone oxidoreductase chain 4 OS...    33   5.4  
tr|B8I6U6|B8I6U6_CLOCE Putative uncharacterized protein OS=Clost...    33   7.1  

>tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragment)
           OS=Plasmodium berghei GN=PB404409.00.0 PE=4 SV=1
          Length = 175

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
 Frame = +3

Query: 126 STHIISLFFTILCTFLLSKL-CLFITSIRL--VHI*CVYIYCTFITHFVILSRFLIVPVN 296
           S H+ S+ F +      S L CL++  + L  +++ C YI   FI+   I   FL +P N
Sbjct: 11  SAHVYSVLFLLSLYLPCSYLPCLYLPCLYLPCLYLPCFYISLVFISPLFISPLFLYLPTN 70

Query: 297 S------SRPIIPTISLDASRSCHP 353
           S      + P  P +SL  + S HP
Sbjct: 71  SNPLSNNNPPSNPGLSLLYTLSSHP 95


>tr|A7S9B8|A7S9B8_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g109967 PE=4 SV=1
          Length = 120

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
 Frame = +3

Query: 108 MHLLRSSTHIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCT----------FITH 257
           MHLL   T  IS ++ ILCT  L+  C+ +  +  V I   YI C            + H
Sbjct: 10  MHLLLLHTVCISSYY-ILCTSPLTTYCVHLLLLHTVCISSYYILCASPLTTYCIHLLLLH 68

Query: 258 FVILSRFLIV---PVNSSRPIIPTISLDASRSCHPCCPLPLSK-CQNLCLL 398
            V +S + I+   P+ +    +P +      S +  C  PL+  C +L LL
Sbjct: 69  TVCISSYYILCASPLTTYCVHLPLLHTVCISSYYILCASPLTTYCVHLLLL 119


>tr|Q4AED0|Q4AED0_SIPCU Hypotaurocyamine kinase OS=Siphonosoma
           cumanense GN=HTK PE=2 SV=1
          Length = 356

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +2

Query: 131 PHN*PLLHHTVYFLVK*TLPFYNLNPLGTYLVCIYIL-------YLYNPFCNFESIPDCP 289
           P N P+ H    F     LPF +L+P G Y++   +          + P  N + + DC 
Sbjct: 89  PSNQPISHPAPNFGDLNNLPFNDLDPEGKYVISTRVRVGRSVDGIPFPPLINLQQVKDCE 148

Query: 290 RQLLKAYNTY 319
           ++L+ A  T+
Sbjct: 149 QRLVSALKTF 158


>tr|A7RAB9|A7RAB9_MESMA NADH-ubiquinone oxidoreductase chain 4
           OS=Mesobuthus martensii GN=ND4 PE=3 SV=1
          Length = 438

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 23/76 (30%), Positives = 41/76 (53%)
 Frame = +3

Query: 108 MHLLRSSTHIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCTFITHFVILSRFLIV 287
           M  L  S H+ S FF  L +F L  L +FI+++ ++    +    +F+   +IL  FL++
Sbjct: 34  MLFLPFSQHLSSFFFLDLLSFTLILLSIFISALMILSTSLLENKNSFLNITLILLFFLLL 93

Query: 288 PVNSSRPIIPTISLDA 335
             +SS  ++  IS +A
Sbjct: 94  SFSSSNLMLFYISFEA 109


>tr|B8I6U6|B8I6U6_CLOCE Putative uncharacterized protein
           OS=Clostridium cellulolyticum H10 GN=Ccel_2610 PE=4 SV=1
          Length = 330

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -3

Query: 238 YIYTH*ICTKRIEVIKRQSLLNKKVHSMVKKRLIMWVELRRRCIS--YDLIICK*FGF 71
           YIY H      I+V+  Q LLNKKVH +   RLI      R+ I   Y+ +I   F +
Sbjct: 130 YIYYHRRFETSIDVLMCQRLLNKKVHEIRIDRLISVTSKERKIIGEMYESVIDSVFNY 187