BP917071
Clone id YMU001_000095_E08
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGCTTTTATGGGCAAGGTTAACCTCCTCTCTCACGAAATTTTAAGGATTGCATCTGTCG
AGATCGTCCCTCTCCCTCGTGCTTCCTCACGGAATAGAANAGGAGGAATTTACCACTTCG
TCTCTTCTTAGGCCGGCGGAGTTCTCTTGGTACAATTATTACAGGAACGCTTTGTGAACT
TTCTCTTGAGAGATCACCTTCCCAGCCAGTGGCATCCTTAATCTCTGCCATCCCAACCAC
TTCACTGAGGCATCTATAGCGCATCCATTGAGACAGGGAAGACGCTAGTCTAGCCCAATC
AATACGAATTGACTAACCAGTTGTCATCCCTCAAAATCTTAAGCAAAGAGTTCCAGATCA
AACGTTAAAGGCTCATTCTCTTCTATTGTCAAGGATCACTGTCAGATCACGCCCCTCTTC
GTGGCCAGCCACATCTTCATAACCAAATCCATAGAAACTGAGCACTCTTAAAGGCAAAGA
AATGCCTCAACAAAAAAAAGCAATATCAACACAGCCAAAGCCTAG
■■Homology search results ■■ -
sp_hit_id Q9YBM7
Definition sp|Q9YBM7|Y1571_AERPE Uncharacterized protein APE_1571.1 OS=Aeropyrum pernix
Align length 40
Score (bit) 33.1
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917071|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_E08.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9YBM7|Y1571_AERPE Uncharacterized protein APE_1571.1 OS=Aero... 33 0.84
sp|Q9BQC6|RT63_HUMAN Ribosomal protein 63, mitochondrial OS=Homo... 31 4.1
sp|Q9DB96|NGDN_MOUSE Neuroguidin OS=Mus musculus GN=Ngdn PE=1 SV=1 30 7.0
sp|Q483A0|CYSD_COLP3 Sulfate adenylyltransferase subunit 2 OS=Co... 30 7.1
sp|Q8NEJ9|NGDN_HUMAN Neuroguidin OS=Homo sapiens GN=NGDN PE=1 SV=1 30 9.1

>sp|Q9YBM7|Y1571_AERPE Uncharacterized protein APE_1571.1
OS=Aeropyrum pernix GN=APE_1571.1 PE=3 SV=2
Length = 487

Score = 33.1 bits (74), Expect = 0.84
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1

Query: 192 LSRESSQSVPVIIVPRELRRPKKRRSGKFLLFYSVRKHEG 73
L R S ++ P++ +P LRR R SG +LF V+ HEG
Sbjct: 20 LRRVSVEASPILEIPEILRRIMYRGSGYAVLFEKVKGHEG 59


>sp|Q9BQC6|RT63_HUMAN Ribosomal protein 63, mitochondrial OS=Homo
sapiens GN=MRP63 PE=2 SV=1
Length = 102

Score = 30.8 bits (68), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3

Query: 235 WDGRD*GCHWLGR*SLKRKFTKRSCNNCTKRTPPA*EETKW*IPPXLFREEARGRGTI 62
W GR G W+G+ R + R+ N +R E W P + RE+ RG +
Sbjct: 8 WRGRIPGRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHAAV 65


>sp|Q9DB96|NGDN_MOUSE Neuroguidin OS=Mus musculus GN=Ngdn PE=1 SV=1
Length = 315

Score = 30.0 bits (66), Expect = 7.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3

Query: 306 ELTNQLSSLKILSKEFQIKR*RLILFYCQGSLSDHAPLRGQPHLHNQIHR 455
E+ L L+ L ++ + + +L+ GSLS++ PLR +PH N + +
Sbjct: 91 EIRTVLEKLRPLDQKLKYQIDKLVKTAVTGSLSENDPLRFKPHPSNMVSK 140


>sp|Q483A0|CYSD_COLP3 Sulfate adenylyltransferase subunit 2
OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
GN=cysD PE=3 SV=1
Length = 299

Score = 30.0 bits (66), Expect = 7.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1

Query: 174 QSVPVIIVPRELRRPKKRRSGKFLLFYSVRKHEGEGRSRQMQSLKFRERG 25
+S+P++ + +RP R G ++ R GE QM+S++FR G
Sbjct: 198 ESIPIVPLYLAEKRPVVERDGTLIMVDDDRMPIGEDEEVQMKSVRFRTLG 247


>sp|Q8NEJ9|NGDN_HUMAN Neuroguidin OS=Homo sapiens GN=NGDN PE=1 SV=1
Length = 315

Score = 29.6 bits (65), Expect = 9.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3

Query: 306 ELTNQLSSLKILSKEFQIKR*RLILFYCQGSLSDHAPLRGQPHLHNQIHR 455
E+ L L+ L ++ + + +LI GSLS++ PLR +PH N + +
Sbjct: 91 EIRTVLEKLRPLDQKLKYQIDKLIKTAVTGSLSENDPLRFKPHPSNMMSK 140


tr_hit_id A4CKA3
Definition tr|A4CKA3|A4CKA3_9FLAO Putative uncharacterized protein OS=Robiginitalea biformata HTCC2501
Align length 63
Score (bit) 39.3
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917071|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_E08.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4CKA3|A4CKA3_9FLAO Putative uncharacterized protein OS=Robig... 39 0.12
tr|B6K9B9|B6K9B9_TOXGO Dual specificity protein phosphatase CDC1... 34 5.1
tr|Q2G536|Q2G536_NOVAD TonB-dependent receptor OS=Novosphingobiu... 33 8.6

>tr|A4CKA3|A4CKA3_9FLAO Putative uncharacterized protein
OS=Robiginitalea biformata HTCC2501 GN=RB2501_13279 PE=4
SV=1
Length = 160

Score = 39.3 bits (90), Expect = 0.12
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Frame = -2

Query: 395 SLTIEENEPLTFDLELFA*DFE--------G*QL-VSQFVLIGLD*RLPCLNGCAIDASV 243
SLT EE L DLELF ++ G QL ++FV+IGLD L +GC+IDASV
Sbjct: 22 SLTEEEAAKLRADLELFLKEWTAHGADLKAGCQLPYNRFVVIGLDQDLNAASGCSIDASV 81

Query: 242 KWL 234
+++
Sbjct: 82 RFI 84


>tr|B6K9B9|B6K9B9_TOXGO Dual specificity protein phosphatase CDC14A,
putative OS=Toxoplasma gondii ME49 GN=TGME49_114430 PE=4
SV=1
Length = 479

Score = 33.9 bits (76), Expect = 5.1
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -2

Query: 248 SVKWLGWQRLRMPLAGKVISQEKVH----KAFL**LYQENSAGLRRDEVVNSSXSIP*GS 81
+V+W+GW RL P G ++ ++ + L + +ENS RR S S+P S
Sbjct: 308 AVEWIGWNRLCRP--GSILGPQQQFLTEIQHELLQMNRENSIHTRRLHASQPSKSLPSSS 365

Query: 80 TRERDDLDRC 51
++DDL C
Sbjct: 366 PSQKDDLADC 375


>tr|Q2G536|Q2G536_NOVAD TonB-dependent receptor OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=Saro_2601 PE=3
SV=1
Length = 789

Score = 33.1 bits (74), Expect = 8.6
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3

Query: 3 AFMGKVNLLSHEILRIASVEIVPLPRAS--SRNRXGGIYHFVSS 128
A+MG +N LS ++ + VE++ P+ + RN GG+ H++S+
Sbjct: 126 AYMGSINGLSGQLFDVQRVEVLRGPQGTLFGRNATGGLIHYLST 169