BP917088 |
Clone id |
YMU001_000095_G03 |
Library |
YMU01 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_G03. |
Accession |
BP917088 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTGCAGGTCTTTGTTCCATCTCGAGTGCTCGTGACTAGAGTCCTCACCACACGCCTGTA AACTTATGCGTAAGTGCTGTAAAACATCACTCAAAACACTGATATCAACAACTGTTGACT CCGATTTTGACTGCCGAGCAAGATTGGCAACAACTTTTGCAACGTCAGCTTTCATCTGAG GTTGCTGCTTTATGCTTTTATGATCAAGATGTTTGACCAAAACCACTAACAAAAAGCAAT CAATTCCTGACTTTTCCACAGAATGAAGAATTTGCTGTAGGACAGCCAAAGCTAAACTTT GATCTGATCTCCAATGTTTTCCCATATCAAAATAATGAAAAATTGGCTCCATAAAACGCC TTGTTGTTGTTGCTTCTTTTGCGGCATGAGCTATCTTCTCTATGCAGCTCCTTGCCCATA CACTGGGAATATATGAACCTAAGTCTTCCTTTGGATGGGAAACTTCTTTTCGAAAAGAAA GCTTCGTAAAAGAGTCAGATACTCGTAAAGGTGTTCGCCCTTCCCCTTTGACAACCTCTT TCACCCAATACTGATATGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q09263 |
Definition |
sp|Q09263|EFR3_CAEEL Protein EFR3 homolog OS=Caenorhabditis elegans |
Align length |
134 |
Score (bit) |
43.1 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PRR3 |
Definition |
tr|A7PRR3|A7PRR3_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
190 |
Score (bit) |
121.0 |
E-value |
3.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917088|Adiantum capillus-veneris mRNA, clone: YMU001_000095_G03. (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PRR3|A7PRR3_VITVI Chromosome chr14 scaffold_27, whole genom... 121 3e-26 tr|A5ARA5|A5ARA5_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|A9SMK2|A9SMK2_PHYPA Predicted protein OS=Physcomitrella paten... 120 4e-26 tr|A9SVM6|A9SVM6_PHYPA Predicted protein OS=Physcomitrella paten... 117 3e-25 tr|A7PWD9|A7PWD9_VITVI Chromosome chr8 scaffold_34, whole genome... 117 6e-25 tr|Q10MI0|Q10MI0_ORYSJ Os03g0308200 protein OS=Oryza sativa subs... 114 3e-24 tr|Q10MH9|Q10MH9_ORYSJ Cyclin, putative, expressed OS=Oryza sati... 114 3e-24 tr|A3AH82|A3AH82_ORYSJ Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|Q6YXW5|Q6YXW5_ORYSJ Os02g0143200 protein OS=Oryza sativa subs... 113 6e-24 tr|B8AHG5|B8AHG5_ORYSI Putative uncharacterized protein OS=Oryza... 113 8e-24 tr|A2XFV6|A2XFV6_ORYSI Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q2L357|Q2L357_MALDO Putative cyclin-related protein (Fragment... 107 6e-22 tr|Q3E982|Q3E982_ARATH Uncharacterized protein At5g21080.1 OS=Ar... 105 2e-21 tr|Q8GZ47|Q8GZ47_ARATH Putative uncharacterized protein At5g2685... 105 2e-21 tr|A7QM62|A7QM62_VITVI Chromosome chr5 scaffold_124, whole genom... 102 1e-20 tr|A3A324|A3A324_ORYSJ Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|Q0WQP8|Q0WQP8_ARATH Putative uncharacterized protein At2g4183... 101 2e-20 tr|A7Q273|A7Q273_VITVI Chromosome chr13 scaffold_45, whole genom... 100 5e-20 tr|Q6K7F3|Q6K7F3_ORYSJ Os02g0780500 protein OS=Oryza sativa subs... 100 9e-20 tr|O04631|O04631_ARATH Putative uncharacterized protein F2P16.24... 98 3e-19 tr|Q5N857|Q5N857_ORYSJ Cyclin-like (Os01g0898300 protein) OS=Ory... 97 5e-19 tr|A3A0J6|A3A0J6_ORYSJ Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|Q9LNE9|Q9LNE9_ARATH T21E18.2 protein OS=Arabidopsis thaliana ... 92 1e-17 tr|Q94KD1|Q94KD1_ARATH At1g05960/T21E18_20 OS=Arabidopsis thalia... 92 1e-17 tr|Q6ZIX9|Q6ZIX9_ORYSJ Os07g0205900 protein OS=Oryza sativa subs... 90 7e-17 tr|B8B899|B8B899_ORYSI Putative uncharacterized protein OS=Oryza... 90 7e-17 tr|Q45NM9|Q45NM9_MEDSA Putative uncharacterized protein (Fragmen... 63 1e-08 tr|A3ABY7|A3ABY7_ORYSJ Putative uncharacterized protein OS=Oryza... 44 2e-05 tr|O22937|O22937_ARATH Putative uncharacterized protein At2g4183... 49 1e-04 tr|A3BHN0|A3BHN0_ORYSJ Putative uncharacterized protein OS=Oryza... 47 0.001
>tr|A7PRR3|A7PRR3_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022602001 PE=4 SV=1 Length = 1002
Score = 121 bits (303), Expect = 3e-26 Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 8/190 (4%) Frame = -2
Query: 547 WVKEVVKGEGR----TPLRVSDSFTKLSFRKEVSHP----KEDLGSYIPSVWARSCIEKI 392 WV EVV+ EGR +S S + + E P +E++ + P VWA+ CI+++ Sbjct: 234 WVDEVVRCEGRGGAGVGSEISPSCPVIRPQTEKKDPSLLTREEIET--PKVWAQICIQRM 291
Query: 391 AHAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVK 212 AKE+TT RR ++P+F YFD G+HW Q LAL VL + + VE G ++ Sbjct: 292 VELAKESTTMRRVLDPMFVYFDTGRHWVPRQGLALVVLSDMSYFVESMGDQKMILAAVIR 351
Query: 211 HLDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSH 32 HLDHK++ PQ K+ V +V L Q +S + + +I +SD+ +HLR SLQA E + Sbjct: 352 HLDHKNVAHDPQTKSYVIQVATALVHQVRSGAILAEIGFVSDLCRHLRKSLQATVESAGQ 411
Query: 31 EHSRWNKDLQ 2 + S N LQ Sbjct: 412 QESDLNISLQ 421
>tr|A5ARA5|A5ARA5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012725 PE=4 SV=1 Length = 1471
Score = 121 bits (303), Expect = 3e-26 Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 8/190 (4%) Frame = -2
Query: 547 WVKEVVKGEGR----TPLRVSDSFTKLSFRKEVSHP----KEDLGSYIPSVWARSCIEKI 392 WV EVV+ EGR +S S + + E P +E++ + P VWA+ CI+++ Sbjct: 682 WVDEVVRCEGRGGAGVGSEISPSCPVIRPQTEKKDPSLLTREEIET--PKVWAQICIQRM 739
Query: 391 AHAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVK 212 AKE+TT RR ++P+F YFD G+HW Q LAL VL + + VE G ++ Sbjct: 740 VELAKESTTMRRVLDPMFVYFDTGRHWVPRQGLALVVLSDMSYFVESMGDQKMILAAVIR 799
Query: 211 HLDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSH 32 HLDHK++ PQ K+ V +V L Q +S + + +I +SD+ +HLR SLQA E + Sbjct: 800 HLDHKNVAHDPQTKSYVIQVATALVHQVRSGAILAEIGFVSDLCRHLRKSLQATVESAGQ 859
Query: 31 EHSRWNKDLQ 2 + S N LQ Sbjct: 860 QESDLNISLQ 869
>tr|A9SMK2|A9SMK2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132325 PE=4 SV=1 Length = 790
Score = 120 bits (302), Expect = 4e-26 Identities = 68/167 (40%), Positives = 99/167 (59%) Frame = -2
Query: 538 EVVKGEGRTPLRVSDSFTKLSFRKEVSHPKEDLGSYIPSVWARSCIEKIAHAAKEATTTR 359 E+ +GE + + V++ L F +E PSVW++ CI+ +A AKEATT R Sbjct: 226 EIERGEPKQHVLVTNFILFLIFSEETE---------APSVWSQICIQNMAALAKEATTVR 276
Query: 358 RFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVKHLDHKSIKQQP 179 R ++P+F Y D GKHW + LAL VLQ + +E++G V+HLD K+++ Sbjct: 277 RVLDPMFRYLDAGKHWSMETGLALIVLQNMQFLMEQTGNGQLLLAALVRHLDQKNVESDL 336
Query: 178 QMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDS 38 MK ++ V A LARQSKS++TV +I +SD+ +HLR SLQA E S Sbjct: 337 IMKRNILAVTAVLARQSKSKATVAEIGAMSDLSKHLRRSLQASMETS 383
>tr|A9SVM6|A9SVM6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166803 PE=4 SV=1 Length = 1107
Score = 117 bits (294), Expect = 3e-25 Identities = 64/181 (35%), Positives = 104/181 (57%), Gaps = 7/181 (3%) Frame = -2
Query: 559 AYQYWVKEVVKGEGRTPLR--VSDSFTKLSFRKEVSHPKEDLG-----SYIPSVWARSCI 401 A Q W++E ++ E + + KL K + L + PSVW++ CI Sbjct: 276 AQQQWMRETMRSESHAHALHVMREKLNKLHRHKAHDIIMDPLNLTSEEADAPSVWSQICI 335
Query: 400 EKIAHAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXX 221 + + AKEATT RR ++P+F YFD KHW ++ LAL +LQ + +E++G Sbjct: 336 QNMGTLAKEATTVRRVLDPMFRYFDAKKHWSLERGLALVILQNMQFLMEQTGNGQLLLAA 395
Query: 220 XVKHLDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGED 41 V+HLDHK ++++ MK ++ + A LARQSK+++TV ++ +SD+ +HLR+SLQ + Sbjct: 396 LVRHLDHKIVEEKVVMKRNIVALTAVLARQSKTKATVAEVGAMSDLSRHLRMSLQMSMQS 455
Query: 40 S 38 S Sbjct: 456 S 456
>tr|A7PWD9|A7PWD9_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025573001 PE=4 SV=1 Length = 996
Score = 117 bits (292), Expect = 6e-25 Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 9/195 (4%) Frame = -2
Query: 559 AYQYWVKEVVKGEGRTP------LRVSDSFTKLSFRKEVSHPKEDLGSYIPSVWARSCIE 398 A WV+EV+K EG +RV T ++ + EV+ ED + P W+R C+ Sbjct: 227 AQNRWVQEVLKVEGHVSPSPEVTMRVLSWNTIVNEKGEVNVSTEDAKN--PCFWSRVCLH 284
Query: 397 KIAHAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDC-FXXXX 221 +A AKE+TT RR +E +F YFD G W + LA VL+ + E SG + F Sbjct: 285 NMALLAKESTTKRRILESLFLYFDNGNLWSPENGLAFPVLKDMQFLGENSGQNTHFLLSL 344
Query: 220 XVKHLDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGED 41 VKHLDHK++ ++P M+ D+ +V +LAR +K ES+V I +SDV++HLR S+ +D Sbjct: 345 LVKHLDHKNVLKKPSMQLDIVEVTTSLARHAKVESSVAIIGAVSDVMRHLRKSIHCSIDD 404
Query: 40 SS--HEHSRWNKDLQ 2 + + +WN+ Q Sbjct: 405 ENLGADIIKWNRKFQ 419
>tr|Q10MI0|Q10MI0_ORYSJ Os03g0308200 protein OS=Oryza sativa subsp. japonica GN=Os03g0308200 PE=2 SV=1 Length = 988
Score = 114 bits (286), Expect = 3e-24 Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Frame = -2
Query: 547 WVKEVVKGEGRTPLRV-------SDSFTKLSFRKEVSHPKEDLGSYIPSVWARSCIEKIA 389 WV E+V+ EGR L S + S R + +E+ S P VWA C++K+A Sbjct: 231 WVDEIVRREGRAGLGGGNDVNCNSTAIRLRSARDSSALTREERES--PEVWAHICVQKLA 288
Query: 388 HAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVKH 209 AKE+TT RR ++P+ YFD K W Q LAL VL + + + SG + ++H Sbjct: 289 ELAKESTTMRRILDPMLSYFDKKKQWAPRQGLALLVLSDMSYLEKSSGNEQLILTSVIRH 348
Query: 208 LDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSHE 29 LDHK++ PQ+K+D+ + LARQ +S ++ V D+ +HLR +L+A E +S E Sbjct: 349 LDHKNVLYDPQIKSDMIQTATLLARQLRSRGIAAELVVAGDLCRHLRKTLEAM-ESASIE 407
Query: 28 HSRWNKDLQ 2 N+ LQ Sbjct: 408 ELNLNESLQ 416
>tr|Q10MH9|Q10MH9_ORYSJ Cyclin, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g19520 PE=4 SV=1 Length = 729
Score = 114 bits (286), Expect = 3e-24 Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Frame = -2
Query: 547 WVKEVVKGEGRTPLRV-------SDSFTKLSFRKEVSHPKEDLGSYIPSVWARSCIEKIA 389 WV E+V+ EGR L S + S R + +E+ S P VWA C++K+A Sbjct: 231 WVDEIVRREGRAGLGGGNDVNCNSTAIRLRSARDSSALTREERES--PEVWAHICVQKLA 288
Query: 388 HAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVKH 209 AKE+TT RR ++P+ YFD K W Q LAL VL + + + SG + ++H Sbjct: 289 ELAKESTTMRRILDPMLSYFDKKKQWAPRQGLALLVLSDMSYLEKSSGNEQLILTSVIRH 348
Query: 208 LDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSHE 29 LDHK++ PQ+K+D+ + LARQ +S ++ V D+ +HLR +L+A E +S E Sbjct: 349 LDHKNVLYDPQIKSDMIQTATLLARQLRSRGIAAELVVAGDLCRHLRKTLEAM-ESASIE 407
Query: 28 HSRWNKDLQ 2 N+ LQ Sbjct: 408 ELNLNESLQ 416
>tr|A3AH82|A3AH82_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010154 PE=4 SV=1 Length = 963
Score = 114 bits (286), Expect = 3e-24 Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Frame = -2
Query: 547 WVKEVVKGEGRTPLRV-------SDSFTKLSFRKEVSHPKEDLGSYIPSVWARSCIEKIA 389 WV E+V+ EGR L S + S R + +E+ S P VWA C++K+A Sbjct: 206 WVDEIVRREGRAGLGGGNDVNCNSTAIRLRSARDSSALTREERES--PEVWAHICVQKLA 263
Query: 388 HAAKEATTTRRFMEPIFHYFDMGKHWRSDQSLALAVLQQILHSVEKSGIDCFXXXXXVKH 209 AKE+TT RR ++P+ YFD K W Q LAL VL + + + SG + ++H Sbjct: 264 ELAKESTTMRRILDPMLSYFDKKKQWAPRQGLALLVLSDMSYLEKSSGNEQLILTSVIRH 323
Query: 208 LDHKSIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSHE 29 LDHK++ PQ+K+D+ + LARQ +S ++ V D+ +HLR +L+A E +S E Sbjct: 324 LDHKNVLYDPQIKSDMIQTATLLARQLRSRGIAAELVVAGDLCRHLRKTLEAM-ESASIE 382
Query: 28 HSRWNKDLQ 2 N+ LQ Sbjct: 383 ELNLNESLQ 391
>tr|Q6YXW5|Q6YXW5_ORYSJ Os02g0143200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0064G16.4 PE=4 SV=1 Length = 1035
Score = 113 bits (283), Expect = 6e-24 Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Frame = -2
Query: 547 WVKEVVKGEGRTPLRVSDSFTKLSFRKEVSH-PKEDLGSYIPSVWARSCIEKIAHAAKEA 371 WV++V+K EG + S+ + K H P ED P+ W+R C+ +A ++EA Sbjct: 244 WVEQVLKAEGNATISRIPSWKSIVDDKGELHLPAEDAKD--PNFWSRVCVHNMAKLSREA 301
Query: 370 TTTRRFMEPIFHYFDMGKHWRSDQSLALAVL--QQILHSVEKSGIDCFXXXXXVKHLDHK 197 TT RR +E +F +FD W S +LA VL QIL + ID KHL+HK Sbjct: 302 TTFRRVLESLFRHFDNNNSWSSQNTLAFCVLLDMQILMENQGQNIDLMISILV-KHLEHK 360
Query: 196 SIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSHEHSRW 17 S+ +QP+M+ V +V+A+LA QS++E++ I +SD+++H++ +L E +W Sbjct: 361 SVLKQPEMQLSVVEVIASLAEQSRAEASAATIGAISDLIRHMKKTLHVALGSRDLEVIKW 420
Query: 16 NKDLQ 2 N L+ Sbjct: 421 NDKLR 425
>tr|B8AHG5|B8AHG5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05818 PE=4 SV=1 Length = 1056
Score = 113 bits (282), Expect = 8e-24 Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Frame = -2
Query: 547 WVKEVVKGEGRTPLRVSDSFTKLSFRKEVSH-PKEDLGSYIPSVWARSCIEKIAHAAKEA 371 WV++V+K EG + S+ + K H P ED P+ W+R C+ +A ++EA Sbjct: 244 WVEQVLKAEGNATISRIPSWKSIVDDKGELHLPAEDAKD--PNFWSRVCVHNMAKLSREA 301
Query: 370 TTTRRFMEPIFHYFDMGKHWRSDQSLALAVL--QQILHSVEKSGIDCFXXXXXVKHLDHK 197 TT RR +E +F +FD W S +LA VL QIL + ID KHL+HK Sbjct: 302 TTFRRVVESLFRHFDNNNSWSSQNTLAFCVLLDMQILMENQGQNIDLMISILV-KHLEHK 360
Query: 196 SIKQQPQMKADVAKVVANLARQSKSESTVVDISVLSDVLQHLRISLQACGEDSSHEHSRW 17 S+ +QP+M+ V +V+A+LA QS++E++ I +SD+++H++ +L E +W Sbjct: 361 SVLKQPEMQLSVVEVIASLAEQSRAEASAATIGAISDLIRHMKKTLHVALGSRDLEVIKW 420
Query: 16 NKDLQ 2 N L+ Sbjct: 421 NDKLR 425
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