BP917089 |
Clone id |
YMU001_000095_G04 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_G04. |
Accession |
BP917089 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCATCTGCTTCACGATACCTCTTAGATTCCTTGCTTTGAAGATGATAACTTCGATTTCC ATAAGATTCATCCTTTTCCCACCTTGCTGCACGTGAATCATACAGCCTATTCCTTCCTTC TTCTTTTGAACTCTTACGTCGCCGTCTAGCTTGTTCATCCTCTACATCTAAGGTATCCTC AAACACCATATCATACCTTTGTGCCGCTCCACCACGCTGACCTTCAGTACTTTTGACTTC ATATTTGGGTCGTTCCTGCGGTCTCCCATCTTCATCTTTCTCACCAGGACAATCCTTCGC AAAATGGCCAGAGACTCCGCATTTAAAACAACCTGTACCATTTGACTTGGGACCAAAGCT ACTACCTTTGCCATCGTCAACATCCCTCTTGCCAAACCGTCGATAGCGTGTCCATAGCCT TGACACACTTTGGCTGAAGTCAACATGAATGCGCCTGTCATCAATCAGAACATTGTCCAT CTTGAAGTAAGCTGCTTCACATGCCTTCAGTGTTTCAAATTCTATAAATGCATAACACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CXG3 |
Definition |
sp|Q9CXG3|PPIL4_MOUSE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus |
Align length |
41 |
Score (bit) |
70.9 |
E-value |
4.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S3K5 |
Definition |
tr|A9S3K5|A9S3K5_PHYPA Peptidyl-prolyl cis-trans isomerase OS=Physcomitrella patens subsp. patens |
Align length |
116 |
Score (bit) |
147.0 |
E-value |
5.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917089|Adiantum capillus-veneris mRNA, clone: YMU001_000095_G04. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S3K5|A9S3K5_PHYPA Peptidyl-prolyl cis-trans isomerase OS=Ph... 147 5e-34 tr|A7QD90|A7QD90_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vi... 133 5e-30 tr|Q653M6|Q653M6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 119 1e-25 tr|B8B172|B8B172_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A3BEI2|A3BEI2_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 119 1e-25 tr|Q93YQ8|Q93YQ8_ARATH Peptidyl-prolyl cis-trans isomerase (Frag... 117 5e-25 tr|Q6Q151|Q6Q151_ARATH Peptidyl-prolyl cis-trans isomerase OS=Ar... 117 5e-25 tr|Q9C8M7|Q9C8M7_ARATH Peptidyl-prolyl cis-trans isomerase OS=Ar... 106 9e-22 tr|Q653M7|Q653M7_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 101 3e-20 tr|A5BCZ4|A5BCZ4_VITVI Putative uncharacterized protein OS=Vitis... 100 8e-20 tr|B7FKZ2|B7FKZ2_MEDTR Putative uncharacterized protein OS=Medic... 96 2e-18 tr|B8B171|B8B171_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|Q00XS5|Q00XS5_OSTTA Peptidyl-prolyl cis-trans isomerase OS=Os... 83 8e-15 tr|A8J760|A8J760_CHLRE Peptidyl-prolyl cis-trans isomerase (Frag... 81 4e-14 tr|B6MJ80|B6MJ80_BRAFL Putative uncharacterized protein OS=Branc... 81 4e-14 tr|B5DXS3|B5DXS3_DROPS GA26948 OS=Drosophila pseudoobscura pseud... 80 5e-14 tr|B6LSH2|B6LSH2_BRAFL Putative uncharacterized protein OS=Branc... 80 9e-14 tr|B3P6Y3|B3P6Y3_DROER GG12319 OS=Drosophila erecta GN=GG12319 P... 79 2e-13 tr|B4K5I4|B4K5I4_DROMO GI24038 OS=Drosophila mojavensis GN=GI240... 79 2e-13 tr|B4PV40|B4PV40_DROYA GE10772 OS=Drosophila yakuba GN=GE10772 P... 78 3e-13 tr|B4GPD2|B4GPD2_DROPE GL13859 OS=Drosophila persimilis GN=GL138... 78 3e-13 tr|B3DL92|B3DL92_XENTR LOC733774 protein OS=Xenopus tropicalis G... 77 4e-13 tr|Q179Q7|Q179Q7_AEDAE Peptidyl-prolyl cis-trans isomerase OS=Ae... 77 6e-13 tr|B6KEY5|B6KEY5_TOXGO RNA recognition motif-containing protein ... 77 6e-13 tr|Q179C8|Q179C8_AEDAE Peptidyl-prolyl cis-trans isomerase OS=Ae... 77 8e-13 tr|Q6PGV9|Q6PGV9_DANRE Peptidyl-prolyl cis-trans isomerase OS=Da... 76 1e-12 tr|A5PM92|A5PM92_DANRE Peptidyl-prolyl cis-trans isomerase OS=Da... 76 1e-12 tr|B4LWD8|B4LWD8_DROVI GJ23668 OS=Drosophila virilis GN=GJ23668 ... 76 1e-12 tr|B4JIL1|B4JIL1_DROGR GH18460 OS=Drosophila grimshawi GN=GH1846... 76 1e-12 tr|B4QTT0|B4QTT0_DROSI GD18267 OS=Drosophila simulans GN=GD18267... 76 1e-12
>tr|A9S3K5|A9S3K5_PHYPA Peptidyl-prolyl cis-trans isomerase OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123572 PE=3 SV=1 Length = 388
Score = 147 bits (370), Expect = 5e-34 Identities = 74/116 (63%), Positives = 84/116 (72%), Gaps = 2/116 (1%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFET +ACEAAYFKMDNVLIDDRRIHVDFSQSVS LW RYR+ GK D G Sbjct: 282 CYAFIEFETEEACEAAYFKMDNVLIDDRRIHVDFSQSVSHLWNRYRKLGKAGGDAANG-- 339
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCP--GEKDEDGRPQERPKYEVKSTEGQRGGAAQR 196 G GCFKCG GHFAK+CP G + ++G P E+PKY +K T GQRG A ++ Sbjct: 340 ------GKGCFKCGEVGHFAKECPNNGTEQKEG-PTEKPKYTIKDTGGQRGHAHKK 388
>tr|A7QD90|A7QD90_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=GSVIVT00035738001 PE=3 SV=1 Length = 627
Score = 133 bits (335), Expect = 5e-30 Identities = 71/122 (58%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFET +ACE AYFKMDN LIDDRRIHVDFSQSVS+LW++YRR RD GK Sbjct: 285 CYAFIEFETNEACEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQYRR---RDHQTGK--- 338
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGG-AAQRYDMVF 181 GTGCFKCG H AKDC G + +P PKY +K Q GG RY+MVF Sbjct: 339 ------GTGCFKCGAVDHIAKDCTGSPTKQQQP---PKYILKDNNTQHGGDNNSRYEMVF 389
Query: 180 ED 175 ++ Sbjct: 390 DE 391
>tr|Q653M6|Q653M6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=P0485A07.4 PE=2 SV=1 Length = 564
Score = 119 bits (297), Expect = 1e-25 Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 2/131 (1%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFET +ACE A+FKMDN LIDDRRIHVDFSQSVS+LW ++R+ KR+ Sbjct: 284 CYAFIEFETKEACERAFFKMDNCLIDDRRIHVDFSQSVSKLWGQFRQ-SKRN-------- 334
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQR-YDMVF 181 +N GCFKCG H AKDC ++ + P Y +K QRGG +R YD+VF Sbjct: 335 ----ANKDGCFKCGAPDHIAKDCDQGTEQKNK---GPSYVLKDENTQRGGNNRRSYDLVF 387
Query: 180 -EDTLDVEDEQ 151 ED + D+Q Sbjct: 388 DEDGENYTDQQ 398
>tr|B8B172|B8B172_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24063 PE=4 SV=1 Length = 564
Score = 119 bits (297), Expect = 1e-25 Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 2/131 (1%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFET +ACE A+FKMDN LIDDRRIHVDFSQSVS+LW ++R+ KR+ Sbjct: 284 CYAFIEFETKEACERAFFKMDNCLIDDRRIHVDFSQSVSKLWGQFRQ-SKRN-------- 334
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQR-YDMVF 181 +N GCFKCG H AKDC ++ + P Y +K QRGG +R YD+VF Sbjct: 335 ----ANKDGCFKCGAPDHIAKDCDQGTEQKNK---GPSYVLKDENTQRGGNNRRSYDLVF 387
Query: 180 -EDTLDVEDEQ 151 ED + D+Q Sbjct: 388 DEDGENYTDQQ 398
>tr|A3BEI2|A3BEI2_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=OsJ_021454 PE=3 SV=1 Length = 561
Score = 119 bits (297), Expect = 1e-25 Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 2/131 (1%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFET +ACE A+FKMDN LIDDRRIHVDFSQSVS+LW ++R+ KR+ Sbjct: 281 CYAFIEFETKEACERAFFKMDNCLIDDRRIHVDFSQSVSKLWGQFRQ-SKRN-------- 331
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQR-YDMVF 181 +N GCFKCG H AKDC ++ + P Y +K QRGG +R YD+VF Sbjct: 332 ----ANKDGCFKCGAPDHIAKDCDQGTEQKNK---GPSYVLKDENTQRGGNNRRSYDLVF 384
Query: 180 -EDTLDVEDEQ 151 ED + D+Q Sbjct: 385 DEDGENYTDQQ 395
>tr|Q93YQ8|Q93YQ8_ARATH Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 441
Score = 117 bits (292), Expect = 5e-25 Identities = 63/120 (52%), Positives = 76/120 (63%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFE ++CE AYFKMDN LIDDRRIHVDFSQSVS+LW+++R ++D GKG+ Sbjct: 285 CYAFIEFENKESCEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQFR---QKDSQKGKGN- 340
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQRYDMVFE 178 GCFKCG + H AKDC G K+ VK Q GG + Y+MVFE Sbjct: 341 --------GCFKCGSTDHIAKDCVGGPSS--------KFIVKDQNRQHGG-GEGYEMVFE 383
>tr|Q6Q151|Q6Q151_ARATH Peptidyl-prolyl cis-trans isomerase OS=Arabidopsis thaliana GN=CYP59 PE=1 SV=1 Length = 506
Score = 117 bits (292), Expect = 5e-25 Identities = 63/120 (52%), Positives = 76/120 (63%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 CYAFIEFE ++CE AYFKMDN LIDDRRIHVDFSQSVS+LW+++R ++D GKG+ Sbjct: 285 CYAFIEFENKESCEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQFR---QKDSQKGKGN- 340
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQRYDMVFE 178 GCFKCG + H AKDC G K+ VK Q GG + Y+MVFE Sbjct: 341 --------GCFKCGSTDHIAKDCVGGPSS--------KFIVKDQNRQHGG-GEGYEMVFE 383
>tr|Q9C8M7|Q9C8M7_ARATH Peptidyl-prolyl cis-trans isomerase OS=Arabidopsis thaliana GN=F22G10.24 PE=3 SV=1 Length = 509
Score = 106 bits (264), Expect = 9e-22 Identities = 58/116 (50%), Positives = 72/116 (62%) Frame = -3
Query: 525 IEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSSFGPK 346 +EFE ++CE AYFKMDN LIDDRRIHVDFSQSVS+LW+++R ++D GKG+ Sbjct: 292 LEFENKESCEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQFR---QKDSQKGKGN----- 343
Query: 345 SNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQRYDMVFE 178 GCFKCG + H AKDC G K+ VK Q GG + Y+MVFE Sbjct: 344 ----GCFKCGSTDHIAKDCVGGPSS--------KFIVKDQNRQHGG-GEGYEMVFE 386
>tr|Q653M7|Q653M7_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=P0485A07.3 PE=3 SV=1 Length = 548
Score = 101 bits (251), Expect = 3e-20 Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 1/130 (0%) Frame = -3
Query: 537 CYAFIEFETLKACEAAYFKMDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSS 358 C+AFIEFE +ACE A+F MDN LIDDRRI VDFSQSVS+ W ++R+ Sbjct: 311 CFAFIEFEKKEACERAFFMMDNCLIDDRRIRVDFSQSVSKQWRQFRQSKS---------- 360
Query: 357 FGPKSNGTGCFKCGVSGHFAKDCPGEKDEDGRPQERPKYEVKSTEGQRGGAAQR-YDMVF 181 +N GCFKCG A+DC ++ + P Y +K QR G +R YD+VF Sbjct: 361 ---NANKDGCFKCGALDLIARDCDQRAEQKNK---GPNYILKDENTQRSGNKRRSYDLVF 414
Query: 180 EDTLDVEDEQ 151 ED + +Q Sbjct: 415 EDGENYNGQQ 424
>tr|A5BCZ4|A5BCZ4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010984 PE=4 SV=1 Length = 303
Score = 99.8 bits (247), Expect = 8e-20 Identities = 55/103 (53%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Frame = -3
Query: 480 MDNVLIDDRRIHVDFSQSVSRLWTRYRRFGKRDVDDGKGSSFGPKSNGTGCFKCGVSGHF 301 MDN LIDDRRIHVDFSQSVS+LW++YRR RD GK GTGCFKCG H Sbjct: 1 MDNALIDDRRIHVDFSQSVSKLWSQYRR---RDHQTGK---------GTGCFKCGAVDHI 48
Query: 300 AKDCPGEKDEDGRPQERPKYEVKSTEGQRGG-AAQRYDMVFED 175 AKDC G + +P PKY +K Q GG RY+MVF++ Sbjct: 49 AKDCTGSPTKQQQP---PKYILKDNNTQHGGDNNSRYEMVFDE 88
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