BP917092 |
Clone id |
YMU001_000095_G08 |
Library |
YMU01 |
Length |
449 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_G08. |
Accession |
BP917092 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTATACCAACAAGAATTGACCCAACCAAAATGCGTCCTGTTACGGTCAATTGGCACACAA TAGCTTGAAGCCTGCCTGCCACTGAATCGAGAGAATTGTAAAACCAGTCAATGTGGATCC CCACCGACCGCCGAGGTTCCTTCCCTGCTGGCTGGCACATTGAGACTAGATCATTCAGCA ATGTGAATGAGTACATGCGTACACTATACACGAGCGTTGTGAGCATCACACAAAGACCAG CAGCCAATTCATCAGCACATGTGGTGCAAAGCTTTGCATGAGCATCCTTGGTTTGCTGGT CCAGAACTCTGTTCTCCTTGAAACTAGCTTTGAATCTCCCCAAATCAATATTTTCTCGCA TCAACCCATTAGCTGCTGATGCAAGTTGTATTTTCTCTTCGTCTAGTGTCTGTGGCTTCG CTAGACGTTGCAACTTCATATACTTGAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3MS54 |
Definition |
sp|A3MS54|SYC_PYRCJ Cysteinyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) |
Align length |
120 |
Score (bit) |
36.6 |
E-value |
0.05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQ82 |
Definition |
tr|A9TQ82|A9TQ82_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
163 |
Score (bit) |
92.4 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917092|Adiantum capillus-veneris mRNA, clone: YMU001_000095_G08. (449 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQ82|A9TQ82_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17 tr|A9RJD8|A9RJD8_PHYPA Predicted protein OS=Physcomitrella paten... 91 2e-17 tr|A7PL26|A7PL26_VITVI Chromosome chr7 scaffold_20, whole genome... 60 5e-08 tr|Q6ZH55|Q6ZH55_ORYSJ Putative HYS1 OS=Oryza sativa subsp. japo... 52 1e-05 tr|Q0DX76|Q0DX76_ORYSJ Os02g0770100 protein (Fragment) OS=Oryza ... 52 1e-05 tr|B8A0B5|B8A0B5_MAIZE Putative uncharacterized protein OS=Zea m... 50 6e-05 tr|B8A8D8|B8A8D8_ORYSI Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|Q5JLB2|Q5JLB2_ORYSJ Putative HYS1 OS=Oryza sativa subsp. japo... 47 5e-04 tr|Q0JGK6|Q0JGK6_ORYSJ Os01g0918500 protein (Fragment) OS=Oryza ... 47 5e-04 tr|B7EKS8|B7EKS8_ORYSJ cDNA clone:J023111G02, full insert sequen... 47 5e-04 tr|A3A0Y6|A3A0Y6_ORYSJ Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|B8AJ57|B8AJ57_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A3ABR9|A3ABR9_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.034 tr|B6LDU1|B6LDU1_BRAFL Putative uncharacterized protein OS=Branc... 38 0.29 tr|A0Q8F7|A0Q8F7_FRATN Magnesium chelatase OS=Francisella tulare... 34 3.2 tr|B5JQS9|B5JQS9_9BACT PaaX-like protein C-terminal domain OS=Ve... 34 3.2 tr|B4ASX3|B4ASX3_FRANO Putative Mg chelatase-like protein OS=Fra... 34 3.2 tr|A7JNW5|A7JNW5_FRANO Putative uncharacterized protein OS=Franc... 34 3.2 tr|B2JQR6|B2JQR6_BURP8 Secretion protein HlyD family protein OS=... 34 4.2 tr|A7YRC4|A7YRC4_FRATU Putative uncharacterized protein OS=Franc... 34 4.2 tr|A8HRW3|A8HRW3_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 4.2 tr|A6SCG4|A6SCG4_BOTFB Predicted protein OS=Botryotinia fuckelia... 33 5.5 tr|Q60HK6|Q60HK6_9CORO S1 glycoprotein (Fragment) OS=Infectious ... 33 9.4 tr|Q22MF6|Q22MF6_TETTH Putative uncharacterized protein OS=Tetra... 33 9.4
>tr|A9TQ82|A9TQ82_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171317 PE=4 SV=1 Length = 1008
Score = 92.4 bits (228), Expect = 1e-17 Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 23/163 (14%) Frame = -2
Query: 439 MKLQRLAKPQTLDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTT 260 M+L + L E + LAS N LMRE++DL R K FKE D++ AHA Sbjct: 682 MELNLKFRELHLKEANLHLASENNTLMREHVDLSRNKVEFKEAEYQDRKLTAAHAIFAKR 741
Query: 259 CADELAAGLCVMLTTLVYSVRMYSFTLLNDLVSMCQPA---------------------- 146 CADE+ AGLCVML L + YS L D+VS CQP Sbjct: 742 CADEMVAGLCVMLCALFFGAWKYSHERLVDIVSTCQPTLYVSNPLVPLLDSVFIVLPHVT 801
Query: 145 -GKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQLTVTGRILVG 20 EP S + NSL+ ++ RL VC++TV R+L+G Sbjct: 802 LWMEPSNSYVPGFNTVVNSLNHMSSRLHMFVCEVTVASRMLLG 844
>tr|A9RJD8|A9RJD8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_66913 PE=4 SV=1 Length = 1192
Score = 91.3 bits (225), Expect = 2e-17 Identities = 49/135 (36%), Positives = 73/135 (54%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L E + LAS N LMRE++ L R K KE ++ A+A CADE+ AGLCV Sbjct: 779 LKEANLHLASETNSLMREDVGLSRNKIDLKETEFQYRKLSTAYADFSRRCADEMVAGLCV 838
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 ML L + YS+ L ++VS+CQP EP S + N L+ + +L +VC++ Sbjct: 839 MLCALFFGAWRYSYDHLINVVSVCQPIVYEPSNSYVPGLSMIVNLLNLMTSQLLMLVCEV 898
Query: 46 TVTGRILVGSILVGI 2 TV R+ +G ++ + Sbjct: 899 TVAARMFLGLGVISV 913
>tr|A7PL26|A7PL26_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019408001 PE=4 SV=1 Length = 416
Score = 60.1 bits (144), Expect = 5e-08 Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 8/154 (5%) Frame = -2
Query: 445 KYMKLQRLAKPQTLDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLC 266 K ++L K L E ++ L S + L R +G KASFK + +Q HA+L Sbjct: 134 KALELSLSMKKMKLKETQLALNSDSYLLERMKFSMGISKASFKAEKFKNQLEDTKHAELL 193
Query: 265 TTCADELAAGLCVMLTTLVYSVRMYSF--------TLLNDLVSMCQPAGKEPRRSVGIHI 110 C D L AGL +M +LVY +YSF TLLND M Q Sbjct: 194 RKCIDCLVAGLLIMSGSLVYGAYIYSFKRITEATETLLNDAFIMSQE----------FKS 243
Query: 109 DWFYNSLDSVAGRLQAIVCQLTVTGRILVGSILV 8 W + S+ + CQ+ V R++ G ++ Sbjct: 244 WWIPKPMASLNSGFYILRCQVQVVSRMMFGIFMI 277
>tr|Q6ZH55|Q6ZH55_ORYSJ Putative HYS1 OS=Oryza sativa subsp. japonica GN=OJ1079_F11.27 PE=4 SV=1 Length = 545
Score = 52.4 bits (124), Expect = 1e-05 Identities = 34/133 (25%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + +I L+S ++ L + I +G KASF+E + Q HA+L D L + Sbjct: 279 LKQSQIALSSYSHMLEKIKISMGFQKASFREEKFRTQMEDTRHAELLRRLIDLLLTAVVF 338
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + + + C A +EP+ W NS+ + L C L Sbjct: 339 MSVCFGYGTYIYSYKRITAVTAACAAASREPKSW------WMPNSVSAFNSGLLFFRCHL 392
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 393 IAATRMSFGMLMI 405
>tr|Q0DX76|Q0DX76_ORYSJ Os02g0770100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0770100 PE=4 SV=1 Length = 544
Score = 52.4 bits (124), Expect = 1e-05 Identities = 34/133 (25%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + +I L+S ++ L + I +G KASF+E + Q HA+L D L + Sbjct: 278 LKQSQIALSSYSHMLEKIKISMGFQKASFREEKFRTQMEDTRHAELLRRLIDLLLTAVVF 337
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + + + C A +EP+ W NS+ + L C L Sbjct: 338 MSVCFGYGTYIYSYKRITAVTAACAAASREPKSW------WMPNSVSAFNSGLLFFRCHL 391
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 392 IAATRMSFGMLMI 404
>tr|B8A0B5|B8A0B5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 441
Score = 50.1 bits (118), Expect = 6e-05 Identities = 32/133 (24%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + +++L S ++ L + + LG KASF+ + Q HA++ T D L + + + Sbjct: 175 LKQSQLELNSYSHMLDKIKLSLGFQKASFQVEKFKTQMQDTRHAQIMRTLIDFLVSAVII 234
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y YS+ + D+ + C K G W NS+ + L I C + Sbjct: 235 MSVCFGYGTYTYSYQRITDITAACSATSK------GSKSWWMPNSVSNFNTGLLFIRCHV 288
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 289 IAATRMFFGIVMI 301
>tr|B8A8D8|B8A8D8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04945 PE=4 SV=1 Length = 515
Score = 47.4 bits (111), Expect = 4e-04 Identities = 30/133 (22%), Positives = 57/133 (42%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + ++ L+S ++ L + + G KASFK + + A++ T D L + + V Sbjct: 249 LKQSQLALSSHSHMLEKIKLSFGFQKASFKGEKFKTHMQETRDAEILRTLIDFLVSAVIV 308
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + D+ S C K G W NS+ + + + C + Sbjct: 309 MSACFGYGTYIYSYQRITDVTSACSATSK------GFKSWWMPNSVSNFSSGFLFLRCHV 362
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 363 IAVTRMCFGILMI 375
>tr|Q5JLB2|Q5JLB2_ORYSJ Putative HYS1 OS=Oryza sativa subsp. japonica GN=P0413C03.36-1 PE=4 SV=1 Length = 516
Score = 47.0 bits (110), Expect = 5e-04 Identities = 30/133 (22%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + ++ L+S ++ L + + G KASFK + + + A++ T D L + + V Sbjct: 250 LKQSQLALSSHSHMLEKIKLSFGFQKASFKGEKFKTRMQETRDAEILRTLIDFLVSAVIV 309
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + D+ S C K G W NS+ + + + C + Sbjct: 310 MSACFGYGTYIYSYQRITDVTSACSATSK------GSKSWWMPNSVSNFSSGFLFLRCHV 363
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 364 IAVTRMCFGILMI 376
>tr|Q0JGK6|Q0JGK6_ORYSJ Os01g0918500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0918500 PE=4 SV=1 Length = 394
Score = 47.0 bits (110), Expect = 5e-04 Identities = 30/133 (22%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + ++ L+S ++ L + + G KASFK + + + A++ T D L + + V Sbjct: 128 LKQSQLALSSHSHMLEKIKLSFGFQKASFKGEKFKTRMQETRDAEILRTLIDFLVSAVIV 187
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + D+ S C K G W NS+ + + + C + Sbjct: 188 MSACFGYGTYIYSYQRITDVTSACSATSK------GSKSWWMPNSVSNFSSGFLFLRCHV 241
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 242 IAVTRMCFGILMI 254
>tr|B7EKS8|B7EKS8_ORYSJ cDNA clone:J023111G02, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 272
Score = 47.0 bits (110), Expect = 5e-04 Identities = 30/133 (22%), Positives = 58/133 (43%) Frame = -2
Query: 406 LDEEKIQLASAANGLMRENIDLGRFKASFKENRVLDQQTKDAHAKLCTTCADELAAGLCV 227 L + ++ L+S ++ L + + G KASFK + + + A++ T D L + + V Sbjct: 6 LKQSQLALSSHSHMLEKIKLSFGFQKASFKGEKFKTRMQETRDAEILRTLIDFLVSAVIV 65
Query: 226 MLTTLVYSVRMYSFTLLNDLVSMCQPAGKEPRRSVGIHIDWFYNSLDSVAGRLQAIVCQL 47 M Y +YS+ + D+ S C K G W NS+ + + + C + Sbjct: 66 MSACFGYGTYIYSYQRITDVTSACSATSK------GSKSWWMPNSVSNFSSGFLFLRCHV 119
Query: 46 TVTGRILVGSILV 8 R+ G +++ Sbjct: 120 IAVTRMCFGILMI 132
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