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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917095
Clone id YMU001_000095_G11
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGATTGTCGCACATCTGCCCTCCTGAGAATCCTATCGATGCGAGGTCTGGCACATCGGAT
TCCTCTAACCTAGAACTACATGCTTGTCATGCCAGATGCCCACCGTAGTGTAATAACATC
TGTCAAAACGCGTATACAAACCATTTATGCAAGGGGGTTCCAAACTGGAAAACCTAATCT
AATGGACTTGTCCGACATGCAGGTCCTACGAACAGGCTCACAAAATTGCTGGTACCAATC
CTCTTAGGATTCTAGACATCCCTATCTAGGAAGAAAGGGAAAACTGGCTCTGGAGGTCAA
TGAAGTATGTCCACGTGGCACACAGAGCCATGTGCACGTGACACTATGTCGGCGAGGACG
GCGATGGCGACGACGCGACGACAATGCGCTGAAAACACAGATGCTGAAATCTGCGAACGG
GCTGAAACTGAAAGCGTTGGCTAATCTGACCACGCGGCAAGGATGTGCTGCGGGAACGTG
AGACCTACTAGGTTTGGGACTTGACCTGCCGTGTCTGACTGCTGAAAATGGAAAACGCTG
ATGCTAGGGCTGATGCTGT
■■Homology search results ■■ -
sp_hit_id P69527
Definition sp|P69527|AMPO_RAT Aminopeptidase O OS=Rattus norvegicus
Align length 46
Score (bit) 31.2
E-value 3.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917095|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_G11.
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P69527|AMPO_RAT Aminopeptidase O OS=Rattus norvegicus GN=Onpe...    31   3.6  
sp|Q8BXQ6|AMPO_MOUSE Aminopeptidase O OS=Mus musculus GN=Onpep P...    31   3.6  
sp|Q8NVE6|GLMS_STAAW Glucosamine--fructose-6-phosphate aminotran...    30   8.0  
sp|Q6G7F8|GLMS_STAAS Glucosamine--fructose-6-phosphate aminotran...    30   8.0  
sp|Q6GES3|GLMS_STAAR Glucosamine--fructose-6-phosphate aminotran...    30   8.0  
sp|P64228|GLMS_STAAN Glucosamine--fructose-6-phosphate aminotran...    30   8.0  
sp|P64227|GLMS_STAAM Glucosamine--fructose-6-phosphate aminotran...    30   8.0  
sp|Q5HE49|GLMS_STAAC Glucosamine--fructose-6-phosphate aminotran...    30   8.0  

>sp|P69527|AMPO_RAT Aminopeptidase O OS=Rattus norvegicus GN=Onpep
           PE=2 SV=1
          Length = 816

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 129 RVYKPFMQGGSKLENLI*WTCPTCRSYEQAHKIAGTNPLRILDIPI 266
           RV+ P    G+  E L+ W  P+C S   AH + GT+P   LDI I
Sbjct: 400 RVFAPVCLEGACREALL-WLIPSCLS--AAHSVLGTHPFSRLDILI 442


>sp|Q8BXQ6|AMPO_MOUSE Aminopeptidase O OS=Mus musculus GN=Onpep PE=2
           SV=2
          Length = 817

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 129 RVYKPFMQGGSKLENLI*WTCPTCRSYEQAHKIAGTNPLRILDIPI 266
           RV+ P    G+  E L+ W  P+C S   AH + GT+P   LDI I
Sbjct: 402 RVFAPVCLEGACQEALL-WLIPSCLS--AAHSVLGTHPFSRLDILI 444


>sp|Q8NVE6|GLMS_STAAW Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain MW2) GN=glmS PE=3 SV=2
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430


>sp|Q6G7F8|GLMS_STAAS Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain MSSA476) GN=glmS PE=3 SV=3
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430


>sp|Q6GES3|GLMS_STAAR Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain MRSA252) GN=glmS PE=3 SV=3
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430


>sp|P64228|GLMS_STAAN Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain N315) GN=glmS PE=1 SV=2
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430


>sp|P64227|GLMS_STAAM Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain Mu50 / ATCC 700699) GN=glmS PE=1 SV=2
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430


>sp|Q5HE49|GLMS_STAAC Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Staphylococcus aureus
           (strain COL) GN=glmS PE=3 SV=3
          Length = 601

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -3

Query: 437 TLSVSARSQISASVFSAHCRRVVAIAVLADIVSRAHGSVCHVDIL 303
           TL + A  +I+ +   A+  ++  +++L+ IV++ HG    +D+L
Sbjct: 386 TLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLL 430
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917095|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_G11.
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******