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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917099
Clone id YMU001_000095_H05
Library
Length 261
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGTGGGGCAGCAGAGTCGCACTCCAAGAGAAGAATAGTGAGAGCGCTTTCCTCAGGATA
TTCATTTTGAACCATGTTTGCCCTGACTTTTGAGCTGTCTGGTGGTAAGGTTTCCCTTTT
AGGAGCCTTTCTCTTGTGTAAACGTGGGTCCTTTTCACTGGAGAAAATCTTAAAAGATTT
GTAGTAAGCTGCAAATCTGGCTTGCAGCTCCATTGTATCTTTGTATGCAATGTTAAAATC
ATCATATTCCTTCTTCAAGGA
■■Homology search results ■■ -
sp_hit_id Q9DB98
Definition sp|Q9DB98|LENG1_MOUSE Leukocyte receptor cluster member 1 homolog OS=Mus musculus
Align length 48
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917099|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_H05.
         (261 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9DB98|LENG1_MOUSE Leukocyte receptor cluster member 1 homolo...    29   6.5  
sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii ...    29   6.5  
sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens ...    29   6.5  
sp|Q6ZW33|MICLK_HUMAN MICAL C-terminal-like protein OS=Homo sapi...    29   8.5  

>sp|Q9DB98|LENG1_MOUSE Leukocyte receptor cluster member 1 homolog
           OS=Mus musculus GN=Leng1 PE=2 SV=1
          Length = 261

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 171 KIFSSEKDPRLHKRKAPKRETLPPDSSKVRANMVQNEYPEESALTILL 28
           K  SSE  P   +R   +R   PP   K+RA  +Q E  E +    LL
Sbjct: 168 KRHSSESRPSREERPQKQRPREPPSLEKLRAERLQREAAERARAEALL 215


>sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii
           GN=FUCA2 PE=2 SV=1
          Length = 465

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -1

Query: 240 DFNIAYKDTMELQARFAAYYKSFK----IFSSEKDPRLHKRKAPKRETLPPDSSKVRANM 73
           +  +A ++  +L  RF  YY  F+    +F  ++    HKR+ P  +TLP         +
Sbjct: 162 ELEVAIRNRTDL--RFGLYYSLFEWFHPLFLEDESSSFHKRQFPVSKTLPE-----LYEL 214

Query: 72  VQNEYPEESALTILLLECDSAAP 4
           V N  PE     +L  + D  AP
Sbjct: 215 VNNYQPE-----VLWSDGDGGAP 232


>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens
           GN=FUCA2 PE=2 SV=1
          Length = 467

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -1

Query: 240 DFNIAYKDTMELQARFAAYYKSFK----IFSSEKDPRLHKRKAPKRETLPPDSSKVRANM 73
           +  +A ++  +L  RF  YY  F+    +F  ++    HKR+ P  +TLP         +
Sbjct: 164 ELEVAIRNRTDL--RFGLYYSLFEWFHPLFLEDESSSFHKRQFPVSKTLPE-----LYEL 216

Query: 72  VQNEYPEESALTILLLECDSAAP 4
           V N  PE     +L  + D  AP
Sbjct: 217 VNNYQPE-----VLWSDGDGGAP 234


>sp|Q6ZW33|MICLK_HUMAN MICAL C-terminal-like protein OS=Homo sapiens
           GN=MICALCL PE=2 SV=2
          Length = 698

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 261 SLKKEYDDFNIAYKDTMELQARFAAYYKSFKIFSSEKDPRLHKRK---APKRETLPPDSS 91
           SL++ + D +   K  + L +      KSF+ F  E   R   R    +PKR+ LP DS+
Sbjct: 378 SLQENFPDASKPPKKRISLFSSLRLKDKSFESFLQESRQRKDIRDLFGSPKRKVLPEDSA 437

Query: 90  KVRANMVQ 67
           +    ++Q
Sbjct: 438 QALEKLLQ 445
tr_hit_id B7BKD2
Definition tr|B7BKD2|B7BKD2_9CLOT Putative uncharacterized protein OS=Clostridium hylemonae DSM 15053
Align length 42
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917099|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_H05.
         (261 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7BKD2|B7BKD2_9CLOT Putative uncharacterized protein OS=Clost...    36   1.1  
tr|B0G5S5|B0G5S5_9FIRM Putative uncharacterized protein OS=Dorea...    35   2.4  
tr|B3LW07|B3LW07_DROAN GF17457 OS=Drosophila ananassae GN=GF1745...    33   7.1  
tr|Q54H24|Q54H24_DICDI Putative uncharacterized protein OS=Dicty...    33   9.2  
tr|Q227K8|Q227K8_TETTH Endonuclease/Exonuclease/phosphatase fami...    33   9.2  
tr|B0D2L6|B0D2L6_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.2  
tr|B5CLR2|B5CLR2_9FIRM Putative uncharacterized protein OS=Rumin...    33   9.3  
tr|B0ND42|B0ND42_EUBSP Putative uncharacterized protein OS=Clost...    33   9.3  

>tr|B7BKD2|B7BKD2_9CLOT Putative uncharacterized protein
           OS=Clostridium hylemonae DSM 15053 GN=CLOHYLEM_00961
           PE=4 SV=1
          Length = 163

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = +2

Query: 35  IVRALSSGYSF*TMFALTFELSGGKVSLLGAFLLCKRGSFSL 160
           +VR + SG+ F   F++ + L+GG +SL    LL K+G FS+
Sbjct: 60  VVRVVLSGFIFGNYFSIIYSLAGGLLSLTVMALLKKKGGFSI 101


>tr|B0G5S5|B0G5S5_9FIRM Putative uncharacterized protein OS=Dorea
           formicigenerans ATCC 27755 GN=DORFOR_01616 PE=4 SV=1
          Length = 185

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 35  IVRALSSGYSF*TMFALTFELSGGKVSLLGAFLLCKRGSFSL 160
           IVR L SG  F   F++ + L+GG +SL    LL K G FS+
Sbjct: 80  IVRVLLSGVLFGNYFSIAYSLAGGLLSLTVMALLKKAGGFSV 121


>tr|B3LW07|B3LW07_DROAN GF17457 OS=Drosophila ananassae GN=GF17457
            PE=4 SV=1
          Length = 3045

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = -1

Query: 255  KKEYDDFNIAYKDTMELQARFAAYYKSFKIFSSEKDPRLHKRKAPKRETLPPDSSKVRAN 76
            KKE  D N+  KDT   +       K  K  S EKDP+     A K E LPP       N
Sbjct: 1076 KKEPPDENVGSKDTSASKESDKTE-KHVKKVSEEKDPKAAPNNASKEEKLPPKERNASDN 1134


>tr|Q54H24|Q54H24_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0188557 PE=4 SV=1
          Length = 1163

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = -1

Query: 237 FNIAYKDTMELQARFAAYYKSFKIFSSEKDPRLHKRKAPKRETLPPDSSKVRANMVQNEY 58
           F+I+    + + +RF  YY+SF  F   KD    K K  K E    DS  + +   +   
Sbjct: 491 FSISVVPLLFIPSRFGLYYRSFG-FKPTKDLNKEKEKEKKNENNNSDSLSMESGFKKFNE 549

Query: 57  PEESALTI 34
            E+S L I
Sbjct: 550 KEDSKLNI 557


>tr|Q227K8|Q227K8_TETTH Endonuclease/Exonuclease/phosphatase family
           protein OS=Tetrahymena thermophila SB210
           GN=TTHERM_01802850 PE=4 SV=1
          Length = 674

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -1

Query: 246 YDDFNIAYKDTMELQARFAAYYKSFKIFSSEKD-----PRLHKRKAPKRETLPPDSSKVR 82
           Y DFN+    ++    R A   K  K F   K+     P  H R+A K+ T+     K  
Sbjct: 240 YGDFNLDISSSVNRDGRTAGQIKKLKDFLKSKNLYIHSPNKHTREAYKKNTV----IKTH 295

Query: 81  ANMVQNEYPEESALTILLLECDSA 10
            +   + +P E+ L ++ +  D A
Sbjct: 296 VDFFISSFPPENILQLVTVTKDEA 319


>tr|B0D2L6|B0D2L6_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_293277 PE=4 SV=1
          Length = 781

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -1

Query: 258 LKKEYDDFNIAYKDTMELQARFAAYYKSFKIFSSEKDPRLHKRKAPKRETLPPDSSK 88
           L++E+DD ++  +D  EL+AR + + K   IF+ +K     K+K    +    D+ K
Sbjct: 158 LEREFDDSDLLERDFEELEARESLWEKIRNIFTGKKGKNDKKKKEEAEKKKAADAKK 214


>tr|B5CLR2|B5CLR2_9FIRM Putative uncharacterized protein
           OS=Ruminococcus lactaris ATCC 29176 GN=RUMLAC_00386 PE=4
           SV=1
          Length = 163

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 35  IVRALSSGYSF*TMFALTFELSGGKVSLLGAFLLCKRGSFSLEKI 169
           ++R L SG  F  MF++ + L GG +SL     L K G F++  I
Sbjct: 60  VIRILLSGLIFGNMFSIFYSLGGGLLSLAVMVFLKKTGQFTVAGI 104


>tr|B0ND42|B0ND42_EUBSP Putative uncharacterized protein
           OS=Clostridium scindens ATCC 35704 GN=CLOSCI_01370 PE=4
           SV=1
          Length = 159

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 35  IVRALSSGYSF*TMFALTFELSGGKVSLLGAFLLCKRGSFSL 160
           +VR L +G+ F   F++ + L+GG +SL     + K+G FS+
Sbjct: 56  VVRVLLAGFIFGNYFSIIYSLAGGILSLTIMAFMKKKGGFSI 97