BP917101 |
Clone id |
YMU001_000095_H07 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_H07. |
Accession |
BP917101 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1048Contig1 |
Sequence |
ATTCGCGGCCGCGAATTGTGGTGGTTGGGGGCACATGGTCGGCTGGTGGCAGCAGAGGGC TCGTGGTGGCAACCCCACCATTTTCTTGTTCTGGTTCAGCTTCAAGGGATGCTGCTGTGC GGCTGGCAGGGTGGTCTAGTCTGCGGTTCGGATCTTCTGCTTAGTCAGCGCTCATCCATT CAGCAGGCGATAACCTTCGAAAGGGCATGGCTCCCTTGAAAGCCTGTGGATGCTTGGTTC TTGGTCCTCGTGTCGATGGTGTGTTTCTCATCTTCTCCGAATGCTCTCCTTTTTAGTTGC TACGTTGGTGGTGTGCTTGGCGCATGGTATGCATATGTGGCAGGGACTTCTCCATGGTAG CTCTTCGAGCAACTCCTGAGGTGATGGGGACAATGGGCCCCTTCATTGCTTCGAACTTAC TCTCGGTACGATGTCGGGTCGTTTTGGTTATGGTTCTCTAGATTTAGCTGGGGCTTGCCT CCCCTGTTCGGGCACTTAATGTTGATGATTGTTCTCTTACAGTATGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9R0Q2 |
Definition |
sp|Q9R0Q2|LT4R1_RAT Leukotriene B4 receptor 1 OS=Rattus norvegicus |
Align length |
92 |
Score (bit) |
35.4 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4LQW2 |
Definition |
tr|B4LQW2|B4LQW2_DROVI GJ17502 OS=Drosophila virilis |
Align length |
123 |
Score (bit) |
37.0 |
E-value |
0.55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917101|Adiantum capillus-veneris mRNA, clone: YMU001_000095_H07. (511 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4LQW2|B4LQW2_DROVI GJ17502 OS=Drosophila virilis GN=GJ17502 ... 37 0.55 tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysog... 36 0.94 tr|Q4P0S7|Q4P0S7_USTMA Putative uncharacterized protein OS=Ustil... 36 1.3 tr|A6UDY7|A6UDY7_SINMW ABC transporter related OS=Sinorhizobium ... 35 2.8 tr|A5G1K5|A5G1K5_ACICJ ATP-dependent Clp protease, ATP-binding s... 34 3.6 tr|A7VJD3|A7VJD3_MOUSE LTB4 receptor OS=Mus musculus GN=Ltb4r1 P... 34 3.7 tr|Q7S408|Q7S408_NEUCR Putative uncharacterized protein (Putativ... 34 3.7 tr|A7HHB3|A7HHB3_ANADF Tetratricopeptide TPR_2 repeat protein OS... 34 4.7 tr|A8NEA0|A8NEA0_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 4.7 tr|Q7NTE5|Q7NTE5_CHRVO Type-4 fimbrial biogenesis PilV transmemb... 34 4.8 tr|Q062K5|Q062K5_9SYNE Cobalt-precorrin-6A synthase OS=Synechoco... 34 4.8 tr|Q7Q5D7|Q7Q5D7_ANOGA Cuticular protein 134, RR-1 family (AGAP0... 33 6.1 tr|B8FCY5|B8FCY5_9DELT Translation initiation factor IF-2 OS=Des... 33 8.0 tr|Q6ZQU4|Q6ZQU4_HUMAN cDNA FLJ46885 fis, clone UTERU3016274 (Ch... 33 8.0 tr|B2RP98|B2RP98_HUMAN Chromosome 20 open reading frame 151 OS=H... 33 8.0 tr|A8K2N4|A8K2N4_HUMAN cDNA FLJ77972 OS=Homo sapiens PE=2 SV=1 33 8.0 tr|Q4T7D5|Q4T7D5_TETNG Chromosome undetermined SCAF8129, whole g... 33 8.1 tr|B3E1X2|B3E1X2_GEOLS Formate/nitrite transporter OS=Geobacter ... 33 8.1
>tr|B4LQW2|B4LQW2_DROVI GJ17502 OS=Drosophila virilis GN=GJ17502 PE=4 SV=1 Length = 1850
Score = 37.0 bits (84), Expect = 0.55 Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Frame = -3
Query: 371 PITSGVARRATMEKSLPHMHTMRQAHHQRSN*KGEHSEKMRNTPSTRGPRTKHPQAFKGA 192 P +G+ T+E LP T+ P R P +K P A A Sbjct: 884 PNANGLFEAQTIEPVLPETETVTAL-----------------APPPRPPSSKQPDASSQA 926
Query: 191 MPFRR-LSPAEWMSAD*AEDPNRRLDHPASRTA-ASLEAEPEQENGGVATTSPLLPPADH 18 PFR+ + A ++ A P PA+ +A + P++ VA P LPPA Sbjct: 927 NPFRKTIESAATATSSVAPSPLLSFFTPAANSADCNFFGSPQEATQQVAAQFPELPPASG 986
Query: 17 VPP 9 V P Sbjct: 987 VAP 989
>tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc22g08890 PE=4 SV=1 Length = 504
Score = 36.2 bits (82), Expect = 0.94 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Frame = -3
Query: 380 PIVPITSGVARRATMEKSLPHMHTMRQA--------HHQRSN*KGEHSEKMRNTPSTRGP 225 P P T V R +S+ +H R+A + ++ E E R T + + Sbjct: 57 PSPPATPAVQRVVRSPRSVSSLHVNRRAPASSMGVPRVRATSPGAEFREAQRITAARKEA 116
Query: 224 RTKHPQA-FKGAMPFRRLSPAEWMSAD*AEDPNRRLDHPASRTAASLEAE 78 KH +A + G PF L P S+D ++ P R PAS ++S A+ Sbjct: 117 EEKHKRAVYGGPSPFTDLQPGSSASSDVSKQPAVRDSSPASVESSSSRAQ 166
>tr|Q4P0S7|Q4P0S7_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM06286.1 PE=4 SV=1 Length = 1437
Score = 35.8 bits (81), Expect = 1.3 Identities = 25/93 (26%), Positives = 46/93 (49%) Frame = +2
Query: 224 LVLVSMVCFSSSPNALLFSCYVGGVLGAWYAYVAGTSPW*LFEQLLR*WGQWAPSLLRTY 403 LV++ MV + + + L + G + AW + + G S W +F + L + ++ T Sbjct: 609 LVVIFMVVYVLAAISRLATLRRNGRVAAWSSRLTGRSFWGMFCRPL-----FGRAVAATL 663
Query: 404 SRYDVGSFWLWFSRFSWGLPPLFGHLMLMIVLL 502 Y V +FW W SW +P + ++L+I L+ Sbjct: 664 QIYLVFAFWQWLRGDSW-VPDMLAAILLVIYLV 695
>tr|A6UDY7|A6UDY7_SINMW ABC transporter related OS=Sinorhizobium medicae (strain WSM419) GN=Smed_3041 PE=3 SV=1 Length = 515
Score = 34.7 bits (78), Expect = 2.8 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1
Query: 151 ALIHSAGDNLRKGMAPLKACGCLVLG 228 A++HSAGD LRKG+A + GCLV G Sbjct: 77 AVLHSAGDALRKGIAHVSQEGCLVPG 102
>tr|A5G1K5|A5G1K5_ACICJ ATP-dependent Clp protease, ATP-binding subunit clpA OS=Acidiphilium cryptum (strain JF-5) GN=Acry_2546 PE=3 SV=1 Length = 775
Score = 34.3 bits (77), Expect = 3.6 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -3
Query: 224 RTKHPQAFKGAMPFRRLSPAEWMSAD*AEDPNRRLDHPASRTAASLEAEPEQE 66 R H F A RL ++S A+ P R + P S +A EAEPEQ+ Sbjct: 115 RESHAVYFLQAQDMTRLDAVNFISHGIAKSPGRSVPRPPSGSAEGTEAEPEQK 167
>tr|A7VJD3|A7VJD3_MOUSE LTB4 receptor OS=Mus musculus GN=Ltb4r1 PE=4 SV=1 Length = 351
Score = 34.3 bits (77), Expect = 3.7 Identities = 23/92 (25%), Positives = 40/92 (43%) Frame = +2
Query: 26 LVAAEGSWWQPHHFLVLVQLQGMLLCGWQGGLVCGSDLLLSQRSSIQQAITFERAWLP*K 205 ++ A ++W P+H + LV+ G + GW G L L++ Sbjct: 227 IILAFAAFWLPYHLVNLVEA-GRTVAGWDKNSPAGQRLRLAR------------------ 267
Query: 206 PVDAWFLVLVSMVCFSSSPNALLFSCYVGGVL 301 VL+++ SSS N +L++C GG+L Sbjct: 268 ------YVLIALAFLSSSVNPVLYACAGGGLL 293
>tr|Q7S408|Q7S408_NEUCR Putative uncharacterized protein (Putative uncharacterized protein B23N11.020) OS=Neurospora crassa GN=B23N11.020 PE=4 SV=1 Length = 1607
Score = 34.3 bits (77), Expect = 3.7 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -2
Query: 456 PQLNLENHNQNDPTSYRE*VRSNEGAHCPHHLRSCSKSYHGEVPATYAYHAPSTPP 289 P+L+L + ++ PT S+ G H HH R S + PA + + PSTPP Sbjct: 23 PRLDLRINTRDTPTP-----PSHLGHHTSHHRRHSSDDFLQTTPAQHPFLHPSTPP 73
>tr|A7HHB3|A7HHB3_ANADF Tetratricopeptide TPR_2 repeat protein OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_3930 PE=4 SV=1 Length = 974
Score = 33.9 bits (76), Expect = 4.7 Identities = 25/78 (32%), Positives = 30/78 (38%) Frame = -3
Query: 239 STRGPRTKHPQAFKGAMPFRRLSPAEWMSAD*AEDPNRRLDHPASRTAASLEAEPEQENG 60 ST P T HP+ F A R +SA AE R SR A + E Sbjct: 200 STSSPETAHPEPFDSAASGRSAQDRLRVSAT-AETGTRGAPPVLSRVAPAGETSAAGTVP 258
Query: 59 GVATTSPLLPPADHVPPT 6 G T+P+ PP P T Sbjct: 259 GAGATAPITPPPLRAPAT 276
>tr|A8NEA0|A8NEA0_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_01030 PE=4 SV=1 Length = 970
Score = 33.9 bits (76), Expect = 4.7 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -3
Query: 170 PAEWMSAD*AEDPNRRLDHPASRTAASLEAEPEQENGGVATTSPLLPPADHVPPT 6 P E +S+ E P+ + ++ASLE E E G TT +PPA PPT Sbjct: 787 PTELVSSPPMEPPSSSFSLLSQPSSASLE---ENEGGDAMTTDTTVPPASTAPPT 838
>tr|Q7NTE5|Q7NTE5_CHRVO Type-4 fimbrial biogenesis PilV transmembrane protein OS=Chromobacterium violaceum GN=pilV PE=4 SV=1 Length = 178
Score = 33.9 bits (76), Expect = 4.8 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +1
Query: 13 GTWSAGGSRGLVVATPPFS----CSGSASRDAAVRLAGWSSLRFGSSA*SALIHSAG 171 G+WS S G++ TP S CS S + A +AG+ + ++GS SAL +G Sbjct: 75 GSWSVSAS-GVISGTPSLSQTVVCSASGTTCTAANIAGYDATQWGSGTISALPGGSG 130
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