BP917102 |
Clone id |
YMU001_000095_H09 |
Library |
YMU01 |
Length |
447 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_H09. |
Accession |
BP917102 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3846Contig1 |
Sequence |
GCATCGTATAACTTCTCATACATGCAGCTCACCCACCATATCACCATTATGGAGGGGAAG ACCCCTCTTGAATGTATGAGGGAGAGTCCACCAGCACAATGGTTGAAAAAGTGTCGGCTT CGCAGCCACGCACAGCCACTTCCACCAATGAATCACCCACAGCTCTTCCCCCATCTTTAA CAGATGCACACAAGAAGACTCATAACGGTGTCGATCAGCTATGTCTAATGGAACAAACCC CATGGACATCCATGTCTTGGAAGCACATTCATAATACATCAGCTCCTCTGCCAACATCTC TGTCATCCACACTCGCCGCAACGCATACAAGCGAGCCCCCAATGCAGATACTCTCCCATT GGGTCTGTCTTGACAGAGCTCTCCCGGACAAAGCTCTGGCACCAAGGTCCATTCTCGCGA TGCCGGATCCCATATCTCTCCAGAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86XZ4 |
Definition |
sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich protein 2 OS=Homo sapiens |
Align length |
45 |
Score (bit) |
35.8 |
E-value |
0.084 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917102|Adiantum capillus-veneris mRNA, clone: YMU001_000095_H09. (447 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich pro... 36 0.084 sp|Q8L736|FBK31_ARATH F-box/Kelch-repeat protein At2g02870 OS=Ar... 34 0.33 sp|A2BY60|PRMA_PROM5 Ribosomal protein L11 methyltransferase OS=... 33 0.56 sp|Q9LI89|FBK70_ARATH F-box/Kelch-repeat protein At3g27150 OS=Ar... 33 0.73 sp|Q01SE4|TPIS_SOLUE Triosephosphate isomerase OS=Solibacter usi... 32 1.2 sp|Q0HVE5|Y1921_SHESR UPF0225 protein Shewmr7_1921 OS=Shewanella... 32 1.6 sp|O01634|INX12_CAEEL Innexin-12 OS=Caenorhabditis elegans GN=in... 32 1.6 sp|P97685|NFASC_RAT Neurofascin OS=Rattus norvegicus GN=Nfasc PE... 31 2.1 sp|Q810U3|NFASC_MOUSE Neurofascin OS=Mus musculus GN=Nfasc PE=1 ... 31 2.7 sp|Q08DS0|KLH21_BOVIN Kelch-like protein 21 OS=Bos taurus GN=KLH... 31 2.8 sp|A0KX70|Y2159_SHESA UPF0225 protein Shewana3_2159 OS=Shewanell... 30 3.6 sp|Q0HIJ0|Y2054_SHESM UPF0225 protein Shewmr4_2054 OS=Shewanella... 30 3.6 sp|Q7TU56|PRMA_PROMP Ribosomal protein L11 methyltransferase OS=... 30 3.6 sp|Q6DFU2|NS1BP_XENLA Influenza virus NS1A-binding protein homol... 30 3.6 sp|Q920Q8|NS1BP_MOUSE Influenza virus NS1A-binding protein homol... 30 3.6 sp|Q9UJP4|KLH21_HUMAN Kelch-like protein 21 OS=Homo sapiens GN=K... 30 3.6 sp|A8AD27|MLTF_CITK8 Membrane-bound lytic murein transglycosylas... 30 4.6 sp|Q3U410|KLH21_MOUSE Kelch-like protein 21 OS=Mus musculus GN=K... 30 4.7 sp|Q19746|INX3_CAEEL Innexin-3 OS=Caenorhabditis elegans GN=inx-... 30 4.7 sp|Q9ERB5|SO1C1_MOUSE Solute carrier organic anion transporter f... 30 6.1 sp|Q9NR64|KLHL1_HUMAN Kelch-like protein 1 OS=Homo sapiens GN=KL... 30 6.1 sp|Q9JI74|KLHL1_MOUSE Kelch-like protein 1 OS=Mus musculus GN=Kl... 29 8.0 sp|Q9H2I8|CJ011_HUMAN Leucine-rich repeat-containing protein C10... 29 8.0
>sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich protein 2 OS=Homo sapiens GN=SPATS2 PE=1 SV=1 Length = 545
Score = 35.8 bits (81), Expect = 0.084 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +3
Query: 63 PS*MYEGESTSTMVEKVSASQPRTATSTNESPTALPPSLTDAHKK 197 P Y S + V VS S P A++ + S A PPSLT A+KK Sbjct: 374 PKNSYSTRSRCSSVTSVSLSSPSDASAASSSTCASPPSLTSANKK 418
>sp|Q8L736|FBK31_ARATH F-box/Kelch-repeat protein At2g02870 OS=Arabidopsis thaliana GN=At2g02870 PE=2 SV=2 Length = 467
Score = 33.9 bits (76), Expect = 0.33 Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -1
Query: 441 GEIWDPASREWTLVPELCPGELCQDRPNGRVSALGARLYAL--RRVWMTEMLAEELMYYE 268 GE +D +++WT +P+L P D+ + +A L A+ +++ + E+ Y+ Sbjct: 326 GEEYDLETKKWTQIPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYD 385
Query: 267 CASKTWMSMGFVP 229 +K W+++G +P Sbjct: 386 KENKKWLTVGRLP 398
>sp|A2BY60|PRMA_PROM5 Ribosomal protein L11 methyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=prmA PE=3 SV=1 Length = 300
Score = 33.1 bits (74), Expect = 0.56 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -1
Query: 225 DIADRHRYESSCVHLLKMGEELWVIHWWKWLC--VAAKPTLFQPLCWWTLPHTFK 67 ++ D++ Y ++C + + +E W+ W K+ + K L P CW LP FK Sbjct: 70 EVLDKNNYRTNCFEWIVIEQEDWMSSWKKYWGPELVGKKLLVLP-CWLELPEKFK 123
>sp|Q9LI89|FBK70_ARATH F-box/Kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1 Length = 422
Score = 32.7 bits (73), Expect = 0.73 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = -1
Query: 441 GEIWDPASREWTLVPELCPG---ELCQDRPNGRVSALGARLYALRRVWMTEMLAEELMYY 271 GE +D + W L+P++ Q P ++ +G LY+L E A EL Y Sbjct: 282 GESYDEKTNTWELIPDILKDMSFSSVQSPP--LIAVVGDDLYSL------ETSANELRVY 333
Query: 270 ECASKTWMSMGFVPL 226 + + +W +G VP+ Sbjct: 334 DANANSWKKLGDVPV 348
>sp|Q01SE4|TPIS_SOLUE Triosephosphate isomerase OS=Solibacter usitatus (strain Ellin6076) GN=tpiA PE=3 SV=1 Length = 249
Score = 32.0 bits (71), Expect = 1.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = -1
Query: 423 ASREWTLVPELCPGELCQDRPNGRVSALGARLYALRRVWMTE-MLAEELMYYECASKTWM 247 A+ E+ L P +C GEL DR GR A+ A + +TE A+ ++ YE Sbjct: 115 AALEFGLTPIVCVGELLADREGGRTEAVLAGQFQKGIAGLTEQQFAKIVIAYEPVWAIGT 174
Query: 246 SMGFVPLDIADRHR 205 P AD HR Sbjct: 175 GKTATPEIAADTHR 188
>sp|Q0HVE5|Y1921_SHESR UPF0225 protein Shewmr7_1921 OS=Shewanella sp. (strain MR-7) GN=Shewmr7_1921 PE=3 SV=1 Length = 164
Score = 31.6 bits (70), Expect = 1.6 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1
Query: 10 NFSYMQLTHHITIMEGKTPLECMRESPPAQWL 105 NF Y+ THH +EG T LE +++ P +WL Sbjct: 51 NFDYIIKTHHADFLEGLT-LEQLQQGPHPEWL 81
>sp|O01634|INX12_CAEEL Innexin-12 OS=Caenorhabditis elegans GN=inx-12 PE=1 SV=1 Length = 408
Score = 31.6 bits (70), Expect = 1.6 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1
Query: 210 HRYESSCVHLLKM-GEELWVIHWWKWLCVAAKPTLFQPLCWW 88 H++ CV ++ M E+++V WW WLC T+ + W+ Sbjct: 267 HKHSVQCVLMINMFNEKIFVALWW-WLCFLTVVTITNTIYWF 307
>sp|P97685|NFASC_RAT Neurofascin OS=Rattus norvegicus GN=Nfasc PE=1 SV=2 Length = 1240
Score = 31.2 bits (69), Expect = 2.1 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +3
Query: 93 STMVEKVSASQPRTATSTNESPTALPPSLTDAHKKTHNGVDQ-----LCLMEQTPWTSMS 257 +T+ ++ + TA +T + T PP+ T K D+ + ++ + W +++ Sbjct: 969 TTVATTIATTTTTTAAATTTTTTESPPTTTTGTKIHETAPDEQSIWNVTVLPNSKWANIT 1028
Query: 258 WKH 266 WKH Sbjct: 1029 WKH 1031
>sp|Q810U3|NFASC_MOUSE Neurofascin OS=Mus musculus GN=Nfasc PE=1 SV=1 Length = 1240
Score = 30.8 bits (68), Expect = 2.7 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +3
Query: 93 STMVEKVSASQPRTATSTNESPTALPPSLTDAHKKTHNGVDQ-----LCLMEQTPWTSMS 257 +T+ ++ + TA +T + T PP+ T K D+ + ++ + W +++ Sbjct: 969 TTVATTIATTTTTTAATTTTTTTESPPTTTAGTKIHETAPDEQSIWNVTVLPNSKWANIT 1028
Query: 258 WKH 266 WKH Sbjct: 1029 WKH 1031
>sp|Q08DS0|KLH21_BOVIN Kelch-like protein 21 OS=Bos taurus GN=KLHL21 PE=2 SV=1 Length = 597
Score = 30.8 bits (68), Expect = 2.8 Identities = 16/70 (22%), Positives = 33/70 (47%) Frame = -1
Query: 438 EIWDPASREWTLVPELCPGELCQDRPNGRVSALGARLYALRRVWMTEMLAEELMYYECAS 259 ++++P EW +P + Q G ++ LG +LY T L++ + Y+ + Sbjct: 483 DVYNPTKNEWDKIPSMN-----QVHVGGSLAVLGGKLYVSGGYDNTFELSDVVEAYDPET 537
Query: 258 KTWMSMGFVP 229 + W +G +P Sbjct: 538 RAWSVVGRLP 547
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4K163 |
Definition |
tr|B4K163|B4K163_DROGR GH23593 OS=Drosophila grimshawi |
Align length |
40 |
Score (bit) |
36.2 |
E-value |
0.85 |
Report |
|