BP917104 |
Clone id |
YMU001_000096_A01 |
Library |
YMU01 |
Length |
377 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000096_A01. |
Accession |
BP917104 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2836Contig1 |
Sequence |
GTCCAACGTACGCCCATTTGCATGGAAAACGTAGTATATTTTATCTGTGTCGGAGCTACC GAAGCTCTGGGCCGCGTTCATTAATGACAGTACTCTCAGATCCATGGAGATCGCCATAGC CAAGGGCTTCCTTTTATAACAAGCGCACGCTCTACAGAGTGTGTTCTCTTTGTCCCATTT TCGTTCCCTTCTTGTAGCGTTGTCATTAGTACAATATGCTGCAGAGCGGCAGTTCTGCAT ACGACCATGGGCCCTTACATTGCATGATCGTTGGCTCGGACGATAGTCACGACTTTGAGG AGCTCGATCCATCTGGGCGCTATGGACGGTACAAGGATGTTCTCGGCAAAGGGGCCTTCA AAGTTGTCTATAAAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SCU5 |
Definition |
sp|Q9SCU5|WNK5_ARATH Probable serine/threonine-protein kinase WNK5 OS=Arabidopsis thaliana |
Align length |
33 |
Score (bit) |
52.0 |
E-value |
9.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84RS1 |
Definition |
tr|Q84RS1|Q84RS1_MEDSA ZIK1 protein OS=Medicago sativa |
Align length |
32 |
Score (bit) |
52.4 |
E-value |
1.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917104|Adiantum capillus-veneris mRNA, clone: YMU001_000096_A01. (377 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84RS1|Q84RS1_MEDSA ZIK1 protein OS=Medicago sativa GN=zik1 P... 52 1e-05 tr|A7PCR0|A7PCR0_VITVI Chromosome chr17 scaffold_12, whole genom... 52 1e-05 tr|A7QJ82|A7QJ82_VITVI Chromosome chr2 scaffold_105, whole genom... 50 4e-05 tr|A5AW53|A5AW53_VITVI Putative uncharacterized protein (Chromos... 50 4e-05 tr|A7Q5W6|A7Q5W6_VITVI Chromosome chr14 scaffold_54, whole genom... 50 6e-05 tr|B8AWX6|B8AWX6_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|A9TZB2|A9TZB2_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 7e-05 tr|B8LRE1|B8LRE1_PICSI Putative uncharacterized protein OS=Picea... 49 9e-05 tr|B7ER38|B7ER38_ORYSJ cDNA clone:J023135J22, full insert sequen... 49 9e-05 tr|A9NQB4|A9NQB4_PICSI Putative uncharacterized protein OS=Picea... 49 9e-05 tr|A7NWM6|A7NWM6_VITVI Chromosome chr5 scaffold_2, whole genome ... 49 9e-05 tr|Q3EB23|Q3EB23_ARATH Uncharacterized protein At3g22420.2 OS=Ar... 48 3e-04 tr|B8AWX9|B8AWX9_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|B8B7W4|B8B7W4_ORYSI Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|B7EK88|B7EK88_ORYSJ cDNA clone:001-115-E02, full insert seque... 47 4e-04 tr|B6U4T7|B6U4T7_MAIZE Serine/threonine-protein kinase WNK2 OS=Z... 47 4e-04 tr|B4FUQ8|B4FUQ8_MAIZE Putative uncharacterized protein OS=Zea m... 47 4e-04 tr|B0L641|B0L641_SOYBN WNK1 OS=Glycine max PE=2 SV=1 47 4e-04 tr|A9TIB1|A9TIB1_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 4e-04 tr|A9NQP1|A9NQP1_PICSI Putative uncharacterized protein OS=Picea... 47 5e-04 tr|A7QFM3|A7QFM3_VITVI Chromosome chr8 scaffold_88, whole genome... 47 5e-04 tr|A2YN33|A2YN33_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|B7EDH7|B7EDH7_ORYSJ cDNA clone:J013107M03, full insert sequen... 47 6e-04 tr|A2ZAS5|A2ZAS5_ORYSI Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A7QWH3|A7QWH3_VITVI Chromosome undetermined scaffold_203, who... 46 0.001 tr|Q6EIX6|Q6EIX6_TOBAC Mitogen-activated protein kinase (Serine/... 45 0.001 tr|B0FX62|B0FX62_TOBAC NN mitogen-activated protein kinase OS=Ni... 45 0.001 tr|A7QB96|A7QB96_VITVI Chromosome chr4 scaffold_73, whole genome... 45 0.002 tr|Q7Y236|Q7Y236_GOSHI MAP kinase-like protein OS=Gossypium hirs... 45 0.002 tr|A7NY19|A7NY19_VITVI Chromosome chr6 scaffold_3, whole genome ... 45 0.002
>tr|Q84RS1|Q84RS1_MEDSA ZIK1 protein OS=Medicago sativa GN=zik1 PE=2 SV=1 Length = 591
Score = 52.4 bits (124), Expect = 1e-05 Identities = 21/32 (65%), Positives = 27/32 (84%) Frame = +3
Query: 279 DDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 D +F E+DP+GRYGRYK++LGKGAFK VY+ Sbjct: 11 DPDTEFAEIDPTGRYGRYKEILGKGAFKKVYR 42
>tr|A7PCR0|A7PCR0_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015972001 PE=4 SV=1 Length = 598
Score = 52.4 bits (124), Expect = 1e-05 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = +3
Query: 279 DDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 D +F E+DP+GRYGRYK+VLGKGAFK VY+ Sbjct: 13 DPDTEFVEIDPTGRYGRYKEVLGKGAFKKVYR 44
>tr|A7QJ82|A7QJ82_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000541001 PE=4 SV=1 Length = 574
Score = 50.4 bits (119), Expect = 4e-05 Identities = 22/31 (70%), Positives = 24/31 (77%) Frame = +3
Query: 282 DSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 D DFEE DP+GRY RY + LGKGAFK VYK Sbjct: 9 DDSDFEEKDPTGRYVRYNEFLGKGAFKTVYK 39
>tr|A5AW53|A5AW53_VITVI Putative uncharacterized protein (Chromosome chr10 scaffold_179, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00006916001 PE=4 SV=1 Length = 417
Score = 50.4 bits (119), Expect = 4e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +3
Query: 279 DDSHDFEELDPSGRYGRYKDVLGKGAFKVVYKG 377 + + DF E DPSGRY RY + LGKGAFK VYKG Sbjct: 2 ESAEDFVEKDPSGRYVRYNEFLGKGAFKTVYKG 34
>tr|A7Q5W6|A7Q5W6_VITVI Chromosome chr14 scaffold_54, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031123001 PE=4 SV=1 Length = 621
Score = 50.1 bits (118), Expect = 6e-05 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = +3
Query: 276 SDDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 +DD +F E+DP+GRYGRY ++LGKGA K VY+ Sbjct: 9 ADDYSEFVEVDPTGRYGRYNEILGKGASKTVYR 41
>tr|B8AWX6|B8AWX6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18146 PE=4 SV=1 Length = 621
Score = 49.7 bits (117), Expect = 7e-05 Identities = 21/32 (65%), Positives = 25/32 (78%) Frame = +3
Query: 279 DDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 D +F E+DP+ RYGRY +VLGKGAFK VYK Sbjct: 13 DTEPEFAEVDPTARYGRYTEVLGKGAFKTVYK 44
>tr|A9TZB2|A9TZB2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_1987 PE=4 SV=1 Length = 490
Score = 49.7 bits (117), Expect = 7e-05 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +3
Query: 282 DSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 D +F E DP+GRYGRY +VLGKGAFK VY+ Sbjct: 5 DDSEFVENDPTGRYGRYAEVLGKGAFKTVYR 35
>tr|B8LRE1|B8LRE1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 49.3 bits (116), Expect = 9e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +3
Query: 273 GSDDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 G D F E+DP+GRYGRY++VLG+GA K VY+ Sbjct: 9 GEKDREPFVEVDPTGRYGRYEEVLGRGAMKTVYR 42
>tr|B7ER38|B7ER38_ORYSJ cDNA clone:J023135J22, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 601
Score = 49.3 bits (116), Expect = 9e-05 Identities = 23/53 (43%), Positives = 34/53 (64%) Frame = +3
Query: 219 LQSGSSAYDHGPLHCMIVGSDDSHDFEELDPSGRYGRYKDVLGKGAFKVVYKG 377 LQ S+ + HG L G + E+DP+GRYGR+ ++LGKG+ K+VY+G Sbjct: 5 LQQQSNGHGHGVLLLAEAG------YAEVDPTGRYGRFNEILGKGSSKIVYRG 51
>tr|A9NQB4|A9NQB4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 278
Score = 49.3 bits (116), Expect = 9e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +3
Query: 273 GSDDSHDFEELDPSGRYGRYKDVLGKGAFKVVYK 374 G D F E+DP+GRYGRY++VLG+GA K VY+ Sbjct: 9 GEKDREPFVEVDPTGRYGRYEEVLGRGAMKTVYR 42
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