BP917105
Clone id YMU001_000096_A02
Library
Length 383
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTGGAAGAATTCGCGGCCGCGAATCCACAGCTATCTCTCCTTCTCCCCACAACAACTC
ACCGAGACGTTTCAACTTGCACCAATCAAATAGCTTCATCTGGGTTACCTACGTGCACCA
TCATCCCCTGCACAAAAGTAATTGCATAGGTGTTGATCATTAGTGCGTATATTACAATCC
TCTATTCAAACTCACCAACCACTCCTTATAGCCCAACACTTCAAAGACCCCACCAAACGT
AGGAATAATCAGATGATGCGAACGTCTAATCACTCTCACGGCCATTTGAAGAGGTCCACC
TTGGAAGTATTGCCGATGATCAACACGATGATAATTACGCCCGGTCCAATTAGCATTATC
ATCTTTGTCTTAAACTCTCCAAT
■■Homology search results ■■ -
sp_hit_id Q9KW52
Definition sp|Q9KW52|HEM1_DESVM Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris (strain Miyazaki)
Align length 30
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917105|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_A02.
(354 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9KW52|HEM1_DESVM Glutamyl-tRNA reductase OS=Desulfovibrio vu... 29 8.2
sp|Q920R3|FADS1_RAT Fatty acid desaturase 1 OS=Rattus norvegicus... 29 8.2
sp|Q920L1|FADS1_MOUSE Fatty acid desaturase 1 OS=Mus musculus GN... 29 8.2

>sp|Q9KW52|HEM1_DESVM Glutamyl-tRNA reductase OS=Desulfovibrio
vulgaris (strain Miyazaki) GN=hemA PE=3 SV=2
Length = 435

Score = 28.9 bits (63), Expect = 8.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2

Query: 140 ILQSSIQTHQPLLIAQHFKDPTKRRNNQMM 229
I+ SS H+P++ A+ KD KRR N+ M
Sbjct: 238 IIISSTGAHEPIIRARDIKDVLKRRKNRPM 267


>sp|Q920R3|FADS1_RAT Fatty acid desaturase 1 OS=Rattus norvegicus
GN=Fads1 PE=2 SV=1
Length = 447

Score = 28.9 bits (63), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3

Query: 54 QSNSFIWVTYVHHHPLHKSNCIGVD 128
+SN F+WVT ++H P+H + VD
Sbjct: 333 ESNWFVWVTQMNHIPMHIDHDRNVD 357


>sp|Q920L1|FADS1_MOUSE Fatty acid desaturase 1 OS=Mus musculus
GN=Fads1 PE=2 SV=1
Length = 447

Score = 28.9 bits (63), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3

Query: 54 QSNSFIWVTYVHHHPLHKSNCIGVD 128
+SN F+WVT ++H P+H + VD
Sbjct: 333 ESNWFVWVTQMNHIPMHIDHDRNVD 357


tr_hit_id B4M6L5
Definition tr|B4M6L5|B4M6L5_DROVI Single-minded OS=Drosophila virilis
Align length 56
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917105|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_A02.
(354 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4M6L5|B4M6L5_DROVI Single-minded OS=Drosophila virilis GN=Dv... 36 0.83

>tr|B4M6L5|B4M6L5_DROVI Single-minded OS=Drosophila virilis
GN=Dvir\sim PE=4 SV=1
Length = 761

Score = 36.2 bits (82), Expect = 0.83
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3

Query: 3 AISPSPHNNSPRRFNLHQSNSFIWVTYVHHHPLHKSNCIGVDH*CVYYNPLFKLTN 170
A++P P NN+ N + S+S +W + H PLH+ +DH + Y L+ N
Sbjct: 478 AVTPVPTNNNNNNNNNNNSSSGVW--HQQHAPLHQQQAGSMDHDSLSYTQLYPPLN 531