BP917116
Clone id YMU001_000096_B10
Library
Length 253
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAAGATCTATAAAAGAGGTTGCTGAACATCCAAGAGTAACGTCTTGATAAACAGCTAGTC
TACAACTAGCAACAAGTTAAACCCTGTCCATAGTATCTTGAACAGGTGGAACTTGGAACT
TGCCCATCTTGATTCTATCCCAAATATTTGTGGTGTTGTCGCTATCAAAAACGGTGTTGT
ATTCTTCGAGAATTGCAAAAGCAGCCAGTTTTTTACCCATCGGCCAGCTGCAACTTTATT
CGATGGCCCACTC
■■Homology search results ■■ -
sp_hit_id O15439
Definition sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 OS=Homo sapiens
Align length 47
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917116|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_B10.
(253 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 O... 29 6.3
sp|Q8LDW9|XTH9_ARATH Xyloglucan endotransglucosylase/hydrolase p... 29 8.3

>sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4
OS=Homo sapiens GN=ABCC4 PE=1 SV=3
Length = 1325

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 14/47 (29%)
Frame = +2

Query: 41 VLINS*STTSNKL--------------NPVHSILNRWNLELAHLDSI 139
VL+NS T NK+ NP+ ILNR++ ++ HLD +
Sbjct: 789 VLVNSSQTLHNKMFESILKAPVLFFDRNPIGRILNRFSKDIGHLDDL 835


>sp|Q8LDW9|XTH9_ARATH Xyloglucan endotransglucosylase/hydrolase
protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2
Length = 290

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Frame = -2

Query: 195 QFSKNTT--PFLIATTPQIFGIESR------W--ASSKFHLFKILWTGFNLLLVVD 58
+F NTT P+++ T + G+ +R W +++FH + ILW+ +++ +VD
Sbjct: 105 EFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVD 160


tr_hit_id B8KSA1
Definition tr|B8KSA1|B8KSA1_9GAMM Transporter, PerM family OS=gamma proteobacterium NOR51-B
Align length 42
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917116|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_B10.
(253 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8KSA1|B8KSA1_9GAMM Transporter, PerM family OS=gamma proteob... 33 7.2

>tr|B8KSA1|B8KSA1_9GAMM Transporter, PerM family OS=gamma
proteobacterium NOR51-B GN=NOR51B_2309 PE=4 SV=1
Length = 373

Score = 33.1 bits (74), Expect = 7.2
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = -1

Query: 160 DNTTNIWDRIKMGKFQVPPVQDTMDRV*LVASCRLAVYQDVT 35
D+TT++ +K G+F+VPPV + ++ +V +A+++ +
Sbjct: 96 DHTTDVLSNMKSGEFEVPPVNPAVGKIPIVGENLIALWESAS 137