BP917118
Clone id YMU001_000096_B12
Library
Length 226
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCATGGACATTGCGCTTTTTACTCCAGAGACTGTCCACAATGTCTACGAACTATGCCTTT
GGCTACAGGACACATCGTATATTACGCTGGAGCATGTAAGAAAGAAGTTGAATGTCTTGA
GATTGAAGTCACTTTTGGACGGTTTGGAGCCTTGATTGTGACAATATCTGCATACACGAC
CTTCATCGGGAGCTTGCAAAACGAAGGACCCAAGTTGGCACTGATG
■■Homology search results ■■ -
sp_hit_id Q9LY16
Definition sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana
Align length 39
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917118|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_B12.
(213 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYC... 30 3.7

>sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana
GN=CYCU4-2 PE=1 SV=1
Length = 216

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2

Query: 89 GACKKEVECLEIEVTFGRFGALIVTISAYTTFIGSLQNE 205
G +E+ LE++ FG L VTIS Y + SLQ E
Sbjct: 136 GITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917118|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_B12.
(213 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******