BP917127 |
Clone id |
YMU001_000096_D04 |
Library |
YMU01 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000096_D04. |
Accession |
BP917127 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATTCTCCTGCTGAGCATCACTTCTACCAGAGCTCAACTGATGCCTACCTTTCATTTCAA GATGCTCTGACGCTAGCACAAAAAGCTGAAGCTTGAAGTTTGTCACCAACTCTAGCATTT CCGTCACTTCGTGCAGAAGGTGGCAATTTTGCTGATCTACAGTCTGCAAATCCTCAAATG CCTCTGCATCTGGAAATTGAAGGACGCGTTTCGACTGGGAAATTCCTTCTTCTGCCGCTT TCAATTGCACTTCAACCCTCTTCTGATCCATATTTTGTAAGATTGCTTCATTCTCTTCCT TTAAGCCTCTACAAGCCTTCTTCAGTTCCTCCGCTTTAGCATCTGCCGCTCTGAGTTTTG TAAACATTGAAGTGAGTTCTGCCTGGAGAGCTGTTATTTGTGACTGAAGTTGCTCATGCT TGATTTCCATACATCTTTCTGCATCTTCTTTATTCTGAAGCAACTTGACTTGGGTCTGTT TTGCTTCCAGCAAAGCAGACTTAACATGTTGCAGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9WVQ0 |
Definition |
sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding protein 1 OS=Mus musculus |
Align length |
181 |
Score (bit) |
36.2 |
E-value |
0.094 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917127|Adiantum capillus-veneris mRNA, clone: YMU001_000096_D04. (517 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding prote... 36 0.094 sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1... 36 0.094 sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2 36 0.094 sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3 35 0.16 sp|O00461|GOLI4_HUMAN Golgi integral membrane protein 4 OS=Homo ... 35 0.27 sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2 34 0.47 sp|Q80ZI6|LRSM1_MOUSE E3 ubiquitin-protein ligase LRSAM1 OS=Mus ... 34 0.47 sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Ho... 33 0.80 sp|O33600|RAD50_SULAC DNA double-strand break repair rad50 ATPas... 33 1.0 sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4 33 1.0 sp|Q9P0L9|PK2L1_HUMAN Polycystic kidney disease 2-like 1 protein... 32 2.3 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Hom... 32 2.3 sp|Q9UTK5|ALM1_SCHPO Abnormal long morphology protein 1 OS=Schiz... 32 2.3 sp|A3KNA5|FIL1L_DANRE Filamin A-interacting protein 1-like OS=Da... 31 3.0 sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya go... 31 4.0 sp|Q9EPY0|CARD9_RAT Caspase recruitment domain-containing protei... 31 4.0 sp|Q5RCU2|MED12_PONPY Mediator of RNA polymerase II transcriptio... 30 5.2 sp|Q7YQK8|MED12_PANTR Mediator of RNA polymerase II transcriptio... 30 5.2 sp|A2AGH6|MED12_MOUSE Mediator of RNA polymerase II transcriptio... 30 5.2 sp|Q93074|MED12_HUMAN Mediator of RNA polymerase II transcriptio... 30 5.2 sp|Q9H410|DSN1_HUMAN Kinetochore-associated protein DSN1 homolog... 30 5.2 sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein ka... 30 5.2 sp|Q99JR6|NMNA3_MOUSE Nicotinamide mononucleotide adenylyltransf... 30 6.8 sp|A1KW10|ATPE_NEIMF ATP synthase epsilon chain OS=Neisseria men... 30 6.8 sp|Q9JW69|ATPE_NEIMA ATP synthase epsilon chain OS=Neisseria men... 30 6.8 sp|A9M124|ATPE_NEIM0 ATP synthase epsilon chain OS=Neisseria men... 30 6.8 sp|Q23529|ZYG12_CAEEL Zygote defective protein 12 OS=Caenorhabdi... 30 8.8 sp|P18175|INVO_PIG Involucrin OS=Sus scrofa GN=IVL PE=2 SV=1 30 8.8 sp|Q12344|GYP5_YEAST GTPase-activating protein GYP5 OS=Saccharom... 30 8.8 sp|Q4KLS8|ARGL1_XENLA Arginine and glutamate-rich protein 1 OS=X... 30 8.8
>sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding protein 1 OS=Mus musculus GN=Pmfbp1 PE=2 SV=1 Length = 1022
Score = 36.2 bits (82), Expect = 0.094 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 13/181 (7%) Frame = -1
Query: 511 QHVKSALLEAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAEL-----TSMFTXXXX 347 Q+ +S L K+ KLLQ+K++ +E Q+Q+ + +AEL T+ Sbjct: 402 QYTESQKLSLKKD--KLLQDKDERLHELEKNLMQVQNSLREKEAELEKLQCTTKELDTSL 459
Query: 346 XXXXXXXXXXACRGLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDL 167 C L+ E + + ++++ R QLK +++ ++QSK A + ED Sbjct: 460 QEARQSTSKIDCEALRAEIQKLKDSLEEAR--EQLKVSDQNLTQSKEEAHL-SASSLEDA 516
Query: 166 QTVDQQNCHLLHEVTEMLELVTNFKLQLFVLASE--HLEMKGRH------QLSSGRSDAQ 11 +NC L + E E++ + + QL L E +E + +H +LSS S+ Q Sbjct: 517 HR-KIENCLLQDKQKE--EVIKDLQSQLHKLQKESSKIEEERKHNRQRLQELSSELSEGQ 573
Query: 10 Q 8 + Sbjct: 574 R 574
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1 Length = 1976
Score = 36.2 bits (82), Expect = 0.094 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Frame = -1
Query: 487 EAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXACR 308 EA++ + K L E +E K E+ + Q L+A++ + + + R Sbjct: 1477 EAREKETKALSLARALEEALEAK-EEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKR 1535
Query: 307 GLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCH---- 140 L+++ E + +++ +E +L+A E+ + + +Q A+ DLQT D+QN Sbjct: 1536 ALEQQVEEMRTQLEE--LEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRL 1593
Query: 139 LLHEVTEM-LELVTNFKLQLFVLASE 65 LL +V E+ EL K + +AS+ Sbjct: 1594 LLKQVRELEAELEDERKQRALAVASK 1619
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2 Length = 1976
Score = 36.2 bits (82), Expect = 0.094 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Frame = -1
Query: 487 EAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXACR 308 EA++ + K L E +E K E+ + Q L+A++ + + + R Sbjct: 1477 EAREKETKALSLARALEEALEAK-EEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKR 1535
Query: 307 GLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCH---- 140 L+++ E + +++ +E +L+A E+ + + +Q A+ DLQT D+QN Sbjct: 1536 ALEQQVEEMRTQLEE--LEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRL 1593
Query: 139 LLHEVTEM-LELVTNFKLQLFVLASE 65 LL +V E+ EL K + +AS+ Sbjct: 1594 LLKQVRELEAELEDERKQRALAVASK 1619
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3 Length = 1976
Score = 35.4 bits (80), Expect = 0.16 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Frame = -1
Query: 487 EAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXACR 308 EA++ + K L E +E K E+ + Q L+A++ + + + R Sbjct: 1477 EAREKETKALSLARALEEALEAK-EEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKR 1535
Query: 307 GLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCH---- 140 L+++ E + +++ +E +L+A E+ + + +Q A+ DLQT D+QN Sbjct: 1536 ALEQQVEEMRTQLEE--LEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRL 1593
Query: 139 LLHEVTEM-LELVTNFKLQLFVLASE 65 L+ +V E+ EL K + +AS+ Sbjct: 1594 LIKQVRELEAELEDERKQRALAVASK 1619
>sp|O00461|GOLI4_HUMAN Golgi integral membrane protein 4 OS=Homo sapiens GN=GOLIM4 PE=1 SV=1 Length = 696
Score = 34.7 bits (78), Expect = 0.27 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -1
Query: 490 LEAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXAC 311 LEA++T K Q+ + ++H+ L+SQ L+ + + + Sbjct: 94 LEAQETLNKGRQDSNSRYSALNVQHQMLKSQHEELKKQHSDL------EEEHRKQGEDFS 147
Query: 310 RGLKEENEAILQNMDQKRVEV-QLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCHLL 134 R + + LQ +K E+ +LK + + R L+ + LQ V QQ+ +LL Sbjct: 148 RTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLL 207
Query: 133 HEVTEMLELVTNFKLQLFVLASEHLEMK 50 E +++ + + K L ++ E K Sbjct: 208 SEHEQLVVTLEDHKSALAAAQTQVAEYK 235
>sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2 Length = 1976
Score = 33.9 bits (76), Expect = 0.47 Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Frame = -1
Query: 487 EAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXACR 308 EA++ + K L E +E + E+ + Q L+A++ + + + R Sbjct: 1477 EAREKETKALSLARALEEALEAR-EEAERQNKQLRADMEDLMSSKDDVGKNVHELEKSKR 1535
Query: 307 GLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCH---- 140 L+++ E + +++ +E +L+A E+ + + +Q A+ DLQT D+QN Sbjct: 1536 ALEQQVEEMRTQLEE--LEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRL 1593
Query: 139 LLHEVTEM-LELVTNFKLQLFVLASE 65 L+ +V E+ EL K + +AS+ Sbjct: 1594 LIKQVRELEAELEDERKQRALAVASK 1619
>sp|Q80ZI6|LRSM1_MOUSE E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus GN=Lrsam1 PE=2 SV=1 Length = 727
Score = 33.9 bits (76), Expect = 0.47 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 10/149 (6%) Frame = -1
Query: 508 HVKSALLEAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXX 329 H L KQ Q +L Q+ + +RC++ + +QLQ Q+ + + S Sbjct: 291 HKDEILQTVKQEQTRLEQDLSERQRCLDAERQQLQEQLKQTEQSIASRIQRLLQDNQRQK 350
Query: 328 XXXXACRGLKEENEAILQNMDQKRVEVQ-------LKAAEEGISQS--KRVLQFPDAEAF 176 + L+ E + Q M + E + A ++ +++S R++Q A+ Sbjct: 351 KSSEILKSLENERIRMEQLMSITQEETENLRQREIAAAMQQMLTESCKSRLIQM----AY 406
Query: 175 E-DLQTVDQQNCHLLHEVTEMLELVTNFK 92 E Q++ QQ C + E+ + + + +++ Sbjct: 407 ESQRQSLAQQACSSMAEMDKRFQQILSWQ 435
>sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Homo sapiens GN=CEP250 PE=1 SV=2 Length = 2442
Score = 33.1 bits (74), Expect = 0.80 Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 6/176 (3%) Frame = -1
Query: 517 ELQHVKSALLEAKQTQVKL-LQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXX 341 E H++ LL +QT+V L E + + L++++ L+A + Sbjct: 550 ESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALA 609
Query: 340 XXXXXXXXACRGLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQT 161 L+EEN+++ M+ AAE Q++ LQ AEA + + Sbjct: 610 LDKVGLNQQLLQLEEENQSVCSRME---------AAE----QARNALQVDLAEAEKRREA 656
Query: 160 VDQQNCHLLHEVTEMLELVTNFKLQLFVLASEHLEM-----KGRHQLSSGRSDAQQ 8 + ++N HL ++ + E + L + E E+ + RHQ + + +Q Sbjct: 657 LWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQ 712
>sp|O33600|RAD50_SULAC DNA double-strand break repair rad50 ATPase OS=Sulfolobus acidocaldarius GN=rad50 PE=3 SV=1 Length = 886
Score = 32.7 bits (73), Expect = 1.0 Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 6/154 (3%) Frame = -1
Query: 445 DAERCMEIKHE------QLQSQITALQAELTSMFTXXXXXXXXXXXXXXACRGLKEENEA 284 D+E +I+ E +L QITALQA + S+ +E E Sbjct: 445 DSEHKAKIREEIKVQLLELNKQITALQARINSLI---------------------KEREE 483
Query: 283 ILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQNCHLLHEVTEMLELV 104 + ++ ++E+Q ++ E+GI ++K ++LQ ++++ L +E+ +L Sbjct: 484 LEATRNKLQLELQKRSKEKGIYEAK----------LKELQRLEEEKNKLQNEILSLLSYH 533
Query: 103 TNFKLQLFVLASEHLEMKGRHQLSSGRSDAQQEN 2 F+ +A + E+ H+ SD +E+ Sbjct: 534 QEFE----NIAEKEKELIDYHEEYLKNSDILEED 563
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4 Length = 1979
Score = 32.7 bits (73), Expect = 1.0 Identities = 27/114 (23%), Positives = 55/114 (48%) Frame = -1
Query: 487 EAKQTQVKLLQNKEDAERCMEIKHEQLQSQITALQAELTSMFTXXXXXXXXXXXXXXACR 308 EA++ + K L E +E K E+L+ L+AE+ + + + R Sbjct: 1483 EAREKETKALSLARALEEALEAK-EELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKR 1541
Query: 307 GLKEENEAILQNMDQKRVEVQLKAAEEGISQSKRVLQFPDAEAFEDLQTVDQQN 146 L+++ E + +++ +E +L+AAE+ + + +Q ++ DLQ D+QN Sbjct: 1542 TLEQQVEEMKTQLEE--LEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQN 1593
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8X9L3 |
Definition |
tr|Q8X9L3|Q8X9L3_ECO57 Putative uncharacterized protein OS=Escherichia coli O157:H7 |
Align length |
48 |
Score (bit) |
39.7 |
E-value |
0.091 |
Report |
|