BP917130 |
Clone id |
YMU001_000096_D09 |
Library |
YMU01 |
Length |
407 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000096_D09. |
Accession |
BP917130 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2835Contig1 |
Sequence |
TAAAAGGCCAAGAAAAGGGAATTTCTCACATGCTTGAAGCTAATCGATGCTAACTGAACA GCCCTGCCTACAAGCTACAAGCCGCCGTGCACTGATTGCTCAGGCGAACTACTTTTAAGA GTAGAGCTCATTGCAGCACCAGAAGCCACTACAGAGAAAGGAATATTATGCAAAGCCTAC TTGAATCAGAGGGGTGTGTACTTCCTTCCTTTTGGCTGGTTGGAAACCCCTCAGCTCACT CTGGACTCTTCACGACACCCACTTCAGCAGGTCGCAAGACTCTATCATGCAGCATGTATC CCACCTTCGCAACCATAGAGACAGTCCCAGCTTCTTTACTGGGATCAGGCACTTCAAACA ATGCAAGATGGGAGTTTGGATCAAACTGCTGCCCAACCGGTTCAAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6CRQ1 |
Definition |
sp|Q6CRQ1|GRPE_KLULA GrpE protein homolog, mitochondrial OS=Kluyveromyces lactis |
Align length |
54 |
Score (bit) |
73.9 |
E-value |
2.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917130|Adiantum capillus-veneris mRNA, clone: YMU001_000096_D09. (407 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6CRQ1|GRPE_KLULA GrpE protein homolog, mitochondrial OS=Kluy... 74 2e-13 sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Sacc... 72 1e-12 sp|Q6BTP9|GRPE_DEBHA GrpE protein homolog, mitochondrial OS=Deba... 71 1e-12 sp|Q6NCY6|GRPE_RHOPA Protein grpE OS=Rhodopseudomonas palustris ... 69 9e-12 sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rat... 69 9e-12 sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=M... 69 9e-12 sp|Q2J322|GRPE_RHOP2 Protein grpE OS=Rhodopseudomonas palustris ... 68 1e-11 sp|Q6FPH2|GRPE_CANGA GrpE protein homolog, mitochondrial OS=Cand... 68 1e-11 sp|A4YJR1|GRPE_BRASO Protein grpE OS=Bradyrhizobium sp. (strain ... 68 1e-11 sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=P... 68 1e-11 sp|Q9HAV7|GRPE1_HUMAN GrpE protein homolog 1, mitochondrial OS=H... 68 1e-11 sp|Q54QF9|GRPE_DICDI GrpE protein homolog, mitochondrial OS=Dict... 68 2e-11 sp|Q13E58|GRPE_RHOPS Protein grpE OS=Rhodopseudomonas palustris ... 67 2e-11 sp|Q07US4|GRPE_RHOP5 Protein grpE OS=Rhodopseudomonas palustris ... 67 3e-11 sp|A6U5E2|GRPE_SINMW Protein grpE OS=Sinorhizobium medicae (stra... 67 4e-11 sp|Q75C01|GRPE_ASHGO GrpE protein homolog, mitochondrial OS=Ashb... 67 4e-11 sp|Q79V15|GRPE_BRAJA Protein grpE OS=Bradyrhizobium japonicum GN... 66 5e-11 sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=B... 66 6e-11 sp|Q8G2Y6|GRPE_BRUSU Protein grpE OS=Brucella suis GN=grpE PE=3 ... 65 8e-11 sp|B0CJ30|GRPE_BRUSI Protein grpE OS=Brucella suis (strain ATCC ... 65 8e-11 sp|A5VNA6|GRPE_BRUO2 Protein grpE OS=Brucella ovis (strain ATCC ... 65 8e-11 sp|Q8YEV0|GRPE_BRUME Protein grpE OS=Brucella melitensis GN=grpE... 65 8e-11 sp|A9M7B6|GRPE_BRUC2 Protein grpE OS=Brucella canis (strain ATCC... 65 8e-11 sp|Q1MMC9|GRPE_RHIL3 Protein grpE OS=Rhizobium leguminosarum bv.... 65 1e-10 sp|Q98GQ5|GRPE_RHILO Protein grpE OS=Rhizobium loti GN=grpE PE=3... 62 7e-10 sp|A6WVA7|GRPE_OCHA4 Protein grpE OS=Ochrobactrum anthropi (stra... 62 7e-10 sp|Q2KD99|GRPE_RHIEC Protein grpE OS=Rhizobium etli (strain CFN ... 62 1e-09 sp|P63188|GRPE_AGRTU Protein grpE OS=Agrobacterium tumefaciens G... 62 1e-09 sp|P63187|GRPE_AGRT5 Protein grpE OS=Agrobacterium tumefaciens (... 62 1e-09 sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Dros... 61 2e-09
>sp|Q6CRQ1|GRPE_KLULA GrpE protein homolog, mitochondrial OS=Kluyveromyces lactis GN=mge1 PE=3 SV=1 Length = 243
Score = 73.9 bits (180), Expect = 2e-13 Identities = 32/54 (59%), Positives = 41/54 (75%) Frame = -2
Query: 400 PVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVKSPE 239 P+G+ FDPN H A FE+P P KE GTV V ++GY L+DRV+RPA+VG+VK E Sbjct: 189 PIGESFDPNKHEATFELPQPDKEPGTVFHVQQIGYTLNDRVIRPAKVGIVKDNE 242
>sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Saccharomyces cerevisiae GN=MGE1 PE=1 SV=1 Length = 228
Score = 71.6 bits (174), Expect = 1e-12 Identities = 31/55 (56%), Positives = 42/55 (76%) Frame = -2
Query: 403 EPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVKSPE 239 +P+G+ FDPN H A FE+P P KE GTV V ++G+ L+DRV+RPA+VG+VK E Sbjct: 173 DPLGEPFDPNKHEATFELPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVGIVKGEE 227
>sp|Q6BTP9|GRPE_DEBHA GrpE protein homolog, mitochondrial OS=Debaryomyces hansenii GN=mge1 PE=3 SV=1 Length = 243
Score = 71.2 bits (173), Expect = 1e-12 Identities = 33/55 (60%), Positives = 40/55 (72%) Frame = -2
Query: 403 EPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVKSPE 239 +P+G+QFDPN H A FE+ P KE GTV V + GY L+ RVLRPA+VGVVK E Sbjct: 188 DPIGEQFDPNQHEATFEIAQPDKEPGTVFHVQQNGYTLNSRVLRPAKVGVVKDAE 242
>sp|Q6NCY6|GRPE_RHOPA Protein grpE OS=Rhodopseudomonas palustris GN=grpE PE=3 SV=2 Length = 207
Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/53 (60%), Positives = 39/53 (73%) Frame = -2
Query: 406 FEPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 F+P GQ+FDPN A++EVPDPS AGTV V + G+ + DRVLRPA VGV K Sbjct: 137 FDPKGQKFDPNFQQAMYEVPDPSVPAGTVVQVVQAGFTIGDRVLRPALVGVAK 189
>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus GN=Grpel1 PE=1 SV=2 Length = 217
Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/52 (61%), Positives = 38/52 (73%) Frame = -2
Query: 403 EPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 +P+G +FDP H ALF P KE GTV++V+KVGY LH R LRPA VGVVK Sbjct: 164 DPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215
>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1 PE=2 SV=1 Length = 217
Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/52 (61%), Positives = 38/52 (73%) Frame = -2
Query: 403 EPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 +P+G +FDP H ALF P KE GTV++V+KVGY LH R LRPA VGVVK Sbjct: 164 DPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215
>sp|Q2J322|GRPE_RHOP2 Protein grpE OS=Rhodopseudomonas palustris (strain HaA2) GN=grpE PE=3 SV=1 Length = 206
Score = 68.2 bits (165), Expect = 1e-11 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = -2
Query: 406 FEPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 F+P G++FDPN A++EVPDPS AGTV V + G+M+ +RVLRPA VGV K Sbjct: 137 FDPSGEKFDPNFQQAMYEVPDPSVPAGTVVQVVQAGFMIGERVLRPALVGVAK 189
>sp|Q6FPH2|GRPE_CANGA GrpE protein homolog, mitochondrial OS=Candida glabrata GN=mge1 PE=3 SV=1 Length = 231
Score = 68.2 bits (165), Expect = 1e-11 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = -2
Query: 403 EPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 +P+G++FDPN H A FE+ P KE GTV V ++GY L++RV+RPA+VGVVK Sbjct: 178 DPLGERFDPNKHEATFELAQPDKEPGTVFHVQQLGYTLNERVIRPAKVGVVK 229
>sp|A4YJR1|GRPE_BRASO Protein grpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1 Length = 206
Score = 68.2 bits (165), Expect = 1e-11 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = -2
Query: 406 FEPVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 F+P GQ+FDPN A++EVPDPS +GTV V + G+M+ +RVLRPA VGV K Sbjct: 136 FDPTGQKFDPNFQQAMYEVPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188
>sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=Pongo abelii GN=GRPEL1 PE=2 SV=1 Length = 217
Score = 68.2 bits (165), Expect = 1e-11 Identities = 33/51 (64%), Positives = 37/51 (72%) Frame = -2
Query: 400 PVGQQFDPNSHLALFEVPDPSKEAGTVSMVAKVGYMLHDRVLRPAEVGVVK 248 PVG +FDP H ALF P KE GTV++V+KVGY LH R LRPA VGVVK Sbjct: 165 PVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6EPR4 |
Definition |
tr|Q6EPR4|Q6EPR4_ORYSJ Os09g0284400 protein OS=Oryza sativa subsp. japonica |
Align length |
76 |
Score (bit) |
87.8 |
E-value |
2.0e-16 |
Report |
|