BP917140
Clone id YMU001_000096_F01
Library
Length 357
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACAATGTAGCAACAAACATTGAACACAAGAGTTTGGAGCATGTCGATGATCATTGAGCAA
CAAGAGAAACACAAGACTTTAACTCTATACAAGTTCAGCCGCAAAACTTGAATGCGAGGT
GCTCCCTTAAACCCAGGTAGAAGAGCTGCAGAAGCTTGATTTCTTCCATCTCTAGTAGGG
TGAATGTCAAACAGGACTGTGACATGTAGCGACGTGGGACTTCGTGTGCAATATCATGTG
CCAAACTAACTGGTAACAAACTCTGCAGCCAATACTTACATAGAGCAAAGTGAAAATTAT
GTACAATTCTTACAGTGAATGACAAGCAGAAATCTAACTTCTGTACATCTGCAGGTG
■■Homology search results ■■ -
sp_hit_id P48231
Definition sp|P48231|TCB2_YEAST Tricalbin-2 OS=Saccharomyces cerevisiae
Align length 81
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917140|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F01.
(357 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P48231|TCB2_YEAST Tricalbin-2 OS=Saccharomyces cerevisiae GN=... 32 1.0
sp|Q86X10|K1219_HUMAN Protein KIAA1219 OS=Homo sapiens GN=KIAA12... 29 6.5
sp|Q9Z0R8|TS1R1_RAT Taste receptor type 1 member 1 OS=Rattus nor... 29 8.5

>sp|P48231|TCB2_YEAST Tricalbin-2 OS=Saccharomyces cerevisiae
GN=TCB2 PE=1 SV=1
Length = 1178

Score = 32.0 bits (71), Expect = 1.0
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Frame = -3

Query: 352 ADVQKLDFCLSFTVRIVHNFHFALCKYWLQSL-----------LPVSLAHDIAHEVPRRY 206
+DV +D CLSFT + + C+ ++ S +PVS+A DI +V R+
Sbjct: 236 SDVVVMDVCLSFTPHDMSDLDAKQCRNYVNSNVVLKAKIFGMDIPVSVA-DIFFQVFVRF 294

Query: 205 MSQSCLTFTLLEMEEIKLLQL 143
Q T L+E I+LL++
Sbjct: 295 RFQLMTTLPLVETINIQLLEV 315


>sp|Q86X10|K1219_HUMAN Protein KIAA1219 OS=Homo sapiens GN=KIAA1219
PE=1 SV=1
Length = 1494

Score = 29.3 bits (64), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3

Query: 216 GTSCAISCAKLTGNKLCSQYLHRAK*KLCTILTVND 323
GT C I C+K TG ++ YL R L L +ND
Sbjct: 518 GTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIND 553


>sp|Q9Z0R8|TS1R1_RAT Taste receptor type 1 member 1 OS=Rattus
norvegicus GN=Tas1r1 PE=2 SV=1
Length = 840

Score = 28.9 bits (63), Expect = 8.5
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3

Query: 349 DVQKLDFCLSFTVRIVHNFHFALCKYWLQSLLPVSLAHDIAHEVPRRYMSQSCLTFTLL 173
+V + F L+FT I+ + +C Y + E+P Y C+TF+LL
Sbjct: 721 EVNSVGFLLAFTHNILLSISTFVCSY-------------LGKELPENYNEAKCVTFSLL 766


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917140|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F01.
(357 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******