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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917145
Clone id YMU001_000096_F09
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAACAACTGGAGTGTCGTGTTACTCGTCAGTACTTCAACTAACCTTTAATGGTAGGTTT
CCTACTTGTGGGCATAGAGTCCCCTTCACTTTGATGTGGCATTGCATCTCATACTTGCAA
GCCAGGCAACTAGTTAGTGGAGTTGGTAAGATAGTCCTGCCAAACGGCACGATTTACGTC
TTGAAGTATACAAAGCTTGTACGATTTCATGAAAGGCATGGTCATAACAGGGGTCCACTC
TTCACATGATATGGTTTCATGGCTGGGTCAACAATTTTCTGTCTTAAAACCCATCAAGTA
TATCTGCTGATATTCACATACTAAGGGAAGTATGCATCTGTATGTGCACCATCAATCATC
TGCTTTGCAATTAGATCAAACTCAAGGTCATGAGACCATTGGGTACTAGCTTCTCATCAT
GAACCCCAAACACCACGAGCTGCTGCCACTTTTGAACTTGAACGAGAGCTCAACTCCCAA
AGAATGCGTGCAAATGTATCCGAT
■■Homology search results ■■ -
sp_hit_id Q12794
Definition sp|Q12794|HYAL1_HUMAN Hyaluronidase-1 OS=Homo sapiens
Align length 56
Score (bit) 30.0
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917145|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F09.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q12794|HYAL1_HUMAN Hyaluronidase-1 OS=Homo sapiens GN=HYAL1 P...    30   6.4  
sp|Q6MDK6|DXS_PARUW 1-deoxy-D-xylulose-5-phosphate synthase OS=P...    30   8.3  

>sp|Q12794|HYAL1_HUMAN Hyaluronidase-1 OS=Homo sapiens GN=HYAL1 PE=1
           SV=2
          Length = 435

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 200 YDFMK----GMVITGVHSSHDMVSWLGQQFSVLKPIKYIC*YSHTKGSMHLYVHHQ 355
           YDF+     G   +G+ + +D + WL  Q   L P  Y+       G   +YV H+
Sbjct: 210 YDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHR 265


>sp|Q6MDK6|DXS_PARUW 1-deoxy-D-xylulose-5-phosphate synthase
           OS=Protochlamydia amoebophila (strain UWE25) GN=dxs PE=3
           SV=1
          Length = 635

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 245 HDMVSWLGQQFSVLKPIKYIC*YSHTKGSMHLYVH--HQSSALQL 373
           H +++    +F  ++  K +C +SH K S+H + H  H  +AL L
Sbjct: 80  HKLLTGRNDRFHEIRQFKGLCGFSHPKESIHDHFHAGHAGTALSL 124
tr_hit_id A5AL12
Definition tr|A5AL12|A5AL12_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis vinifera
Align length 27
Score (bit) 40.0
E-value 0.062
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917145|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F09.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AL12|A5AL12_VITVI Putative uncharacterized protein (Chromos...    40   0.062
tr|A9TDZ7|A9TDZ7_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.14 
tr|A9SL52|A9SL52_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.14 
tr|A9PH61|A9PH61_POPTR Putative uncharacterized protein OS=Popul...    38   0.24 
tr|Q9LS90|Q9LS90_ARATH Arabidopsis thaliana genomic DNA, chromos...    37   0.40 
tr|Q8LFF7|Q8LFF7_ARATH Putative uncharacterized protein OS=Arabi...    37   0.40 
tr|Q94LM4|Q94LM4_ORYSA Putative uncharacterized protein OSJNBb00...    35   2.6  
tr|Q6YTW6|Q6YTW6_ORYSJ Putative uncharacterized protein OSJNBb00...    35   2.6  
tr|Q0D4R1|Q0D4R1_ORYSJ Os07g0609700 protein OS=Oryza sativa subs...    35   2.6  
tr|A3BM31|A3BM31_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.6  
tr|A2YNL4|A2YNL4_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.6  
tr|B0EJJ9|B0EJJ9_ENTDI Protein serine/threonine kinase, putative...    33   6.0  
tr|Q38K65|Q38K65_ARATH Disease resistance protein (Fragment) OS=...    33   7.8  
tr|Q38K64|Q38K64_ARATH Disease resistance protein (Fragment) OS=...    33   7.8  

>tr|A5AL12|A5AL12_VITVI Putative uncharacterized protein (Chromosome
           chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis
           vinifera GN=GSVIVT00020105001 PE=4 SV=1
          Length = 457

 Score = 40.0 bits (92), Expect = 0.062
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWG 423
           SDTFARIL+EL     +K+AAARG+WG
Sbjct: 430 SDTFARILYELTSRPNNKMAAARGIWG 456


>tr|A9TDZ7|A9TDZ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_107954 PE=4 SV=1
          Length = 463

 Score = 38.9 bits (89), Expect = 0.14
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SD FARILWEL     SK+ + RGVWGS
Sbjct: 435 SDVFARILWELSSGVSSKMGSIRGVWGS 462


>tr|A9SL52|A9SL52_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_213492 PE=4 SV=1
          Length = 466

 Score = 38.9 bits (89), Expect = 0.14
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SD FARILWEL     SK+ + RGVWGS
Sbjct: 438 SDVFARILWELSSGISSKMGSLRGVWGS 465


>tr|A9PH61|A9PH61_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 453

 Score = 38.1 bits (87), Expect = 0.24
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWG 423
           SDTFARIL+EL     +K  AARGVWG
Sbjct: 426 SDTFARILYELTSRPSNKFTAARGVWG 452


>tr|Q9LS90|Q9LS90_ARATH Arabidopsis thaliana genomic DNA, chromosome
           3, P1 clone: MXC7 (Putative uncharacterized protein
           At3g22990) OS=Arabidopsis thaliana GN=At3g22990 PE=2
           SV=1
          Length = 460

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWG 423
           SD+FARIL+EL     S+VA+ARG+WG
Sbjct: 433 SDSFARILYELTARSNSRVASARGIWG 459


>tr|Q8LFF7|Q8LFF7_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 460

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWG 423
           SD+FARIL+EL     S+VA+ARG+WG
Sbjct: 433 SDSFARILYELTARSNSRVASARGIWG 459


>tr|Q94LM4|Q94LM4_ORYSA Putative uncharacterized protein
           OSJNBb0024A20.6 OS=Oryza sativa GN=OSJNBb0024A20.6 PE=4
           SV=1
          Length = 460

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SDTFARIL+EL     +KV A + +WG+
Sbjct: 431 SDTFARILYELTARPSNKVTAGQAIWGN 458


>tr|Q6YTW6|Q6YTW6_ORYSJ Putative uncharacterized protein
           OSJNBb0018L13.27 OS=Oryza sativa subsp. japonica
           GN=OSJNBb0018L13.27 PE=4 SV=1
          Length = 460

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SDTFARIL+EL     +KV A + +WG+
Sbjct: 431 SDTFARILYELTARPSNKVTAGQAIWGN 458


>tr|Q0D4R1|Q0D4R1_ORYSJ Os07g0609700 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0609700 PE=4 SV=1
          Length = 625

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SDTFARIL+EL     +KV A + +WG+
Sbjct: 596 SDTFARILYELTARPSNKVTAGQAIWGN 623


>tr|A3BM31|A3BM31_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024103 PE=4 SV=1
          Length = 375

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 503 SDTFARILWELXXXXXSKVAAARGVWGS 420
           SDTFARIL+EL     +KV A + +WG+
Sbjct: 346 SDTFARILYELTARPSNKVTAGQAIWGN 373