BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917152|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_G07.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94602|YC8F_SCHPO Uncharacterized protein C622.15c OS=Schizos...    31   2.9  
sp|P11639|Y31K_MCMV Uncharacterized 31.5 kDa protein OS=Maize ch...    30   4.9  
sp|P40072|SLX8_YEAST E3 ubiquitin-protein ligase complex SLX5-SL...    30   4.9  

>sp|O94602|YC8F_SCHPO Uncharacterized protein C622.15c
           OS=Schizosaccharomyces pombe GN=SPCC622.15c PE=2 SV=1
          Length = 557

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 169 LSATASRPALLLPMHKPNLPPIAV-STQVHHLPHPSPSCPY 50
           +S   S+PAL+ P HK N+PP+ +       LP  +P  P+
Sbjct: 276 VSIPGSQPALVTPKHKMNVPPMGMYPLPFSPLPSAAPPIPF 316


>sp|P11639|Y31K_MCMV Uncharacterized 31.5 kDa protein OS=Maize
           chlorotic mottle virus PE=4 SV=1
          Length = 289

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 20  ERVCLSAGKKVRTGGRRMGKVVDLGRYCYWWEVWFVHGQQ*SW 148
           ERVCL  G K+R+G    G + +L     +   W   G +  W
Sbjct: 234 ERVCLQVGAKIRSGAPNSGTITNLPGGTGYGTEWSDDGYETQW 276


>sp|P40072|SLX8_YEAST E3 ubiquitin-protein ligase complex SLX5-SLX8
           subunit SLX8 OS=Saccharomyces cerevisiae GN=SLX8 PE=1
           SV=1
          Length = 274

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
 Frame = -3

Query: 180 CPACFQP------RLQGQLYCCPCTNQ 118
           CP CF+P       L G ++CCPC  Q
Sbjct: 206 CPICFEPPETALMTLCGHVFCCPCLFQ 232

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917152|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_G07.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1LWY5|B1LWY5_METRJ Smr protein/MutS2 OS=Methylobacterium rad...    36   1.2  
tr|Q3KZB3|Q3KZB3_SCHJA SJCHGC06942 protein (Fragment) OS=Schisto...    34   3.5  
tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein OS=Branc...    33   6.0  

>tr|B1LWY5|B1LWY5_METRJ Smr protein/MutS2 OS=Methylobacterium
           radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
           GN=Mrad2831_3715 PE=4 SV=1
          Length = 211

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -2

Query: 160 TASRPALLLPMHKPNLPPIAVSTQVHHLPHPSPSCP 53
           TA+ PAL  P+ KP+ PP A + +  H P P+P  P
Sbjct: 46  TATMPALSAPILKPSAPPAAKTPRPKHPPKPAPEPP 81


>tr|Q3KZB3|Q3KZB3_SCHJA SJCHGC06942 protein (Fragment)
           OS=Schistosoma japonicum PE=2 SV=1
          Length = 184

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 169 LSATASRPALLLPMHKPNLPPIAVSTQVHHLPHPSPSCP 53
           L+   SRP +LLP   P  PP      ++  PHP+PS P
Sbjct: 79  LTRYPSRPPVLLPPPHPATPPPTSPDPLYTSPHPAPSAP 117


>tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_96838 PE=4 SV=1
          Length = 844

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -2

Query: 160 TASRPALLLPMHKPNLPPIAVSTQVHHLPHPSPSCPY 50
           T  RP   L   +P LPP  V  Q H LPH S   P+
Sbjct: 364 TNVRPGATLGTFRPQLPPATVRHQSHGLPHQSHGVPH 400