NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917154
Clone id YMU001_000096_H07
Library
Length 415
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATAACCCCCATCACCTCAATGCTACTGTCGACTTTCTTCACTGACTCCTCCTCTGAAGTG
GTTGAAGAGTCACTACTAGAAAACTCATCCCCAGAGGTTTCAAGATTCATGTCCCGTTGC
TGACTTGTCTTCATGTCATAAAGTATTGGCTTCCCTTTGGCATCCTTCATCTGGATTATT
CCAGTGTCCGAGTCCTACCATAAGCCAAGGCCTCCCTAGAATTTTAGTATAGCCCTCTCC
CTTGTGTGGCTTGACAAAGATGTCCACCTCTACCTCGGTGTTGAACGCCTTTATCCTAAC
TGCATTTATAACACCAACACATAGAACTTTTACAGTATTTGCCATTTTGGCTCAGCATGG
TGCCGGCCTACTCACCTATAAACCCAAATGGTGCATCATTTTTTCACTCATGATG
■■Homology search results ■■ -
sp_hit_id Q5R8X7
Definition sp|Q5R8X7|M3K13_PONAB Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii
Align length 70
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917154|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_H07.
         (415 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R8X7|M3K13_PONAB Mitogen-activated protein kinase kinase ki...    30   4.9  
sp|O43283|M3K13_HUMAN Mitogen-activated protein kinase kinase ki...    30   4.9  
sp|P03265|DNB2_ADE05 Early E2A DNA-binding protein OS=Human aden...    29   8.4  
sp|P03264|DNB2_ADE02 Early E2A DNA-binding protein OS=Human aden...    29   8.4  

>sp|Q5R8X7|M3K13_PONAB Mitogen-activated protein kinase kinase
           kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1
          Length = 966

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 80  KTHPQRFQDSCPVADLSSCHKVLASLWHPSSGLFQCPSPTI--SQGLPRILV*P--SPLC 247
           K HP R     P+   ++  K++     P     Q   P +  S+G+P   V P  SPL 
Sbjct: 516 KRHPVR-----PIIHPNAMEKLMKRKGVPHKSGMQTKRPDLLRSEGIPTTEVAPTASPLS 570

Query: 248 GLTKMSTSTS 277
           G  KMSTS+S
Sbjct: 571 GSPKMSTSSS 580


>sp|O43283|M3K13_HUMAN Mitogen-activated protein kinase kinase
           kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1
          Length = 966

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 80  KTHPQRFQDSCPVADLSSCHKVLASLWHPSSGLFQCPSPTI--SQGLPRILV*P--SPLC 247
           K HP R     P+   ++  K++     P     Q   P +  S+G+P   V P  SPL 
Sbjct: 516 KRHPVR-----PIIHPNAMEKLMKRKGVPHKSGMQTKRPDLLRSEGIPTTEVAPTASPLS 570

Query: 248 GLTKMSTSTS 277
           G  KMSTS+S
Sbjct: 571 GSPKMSTSSS 580


>sp|P03265|DNB2_ADE05 Early E2A DNA-binding protein OS=Human
           adenovirus C serotype 5 GN=DBP PE=1 SV=1
          Length = 529

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 119 ADLSSCHKVLASLWHPSSGLFQCPSP 196
           ADL S   VLAS+ HP+  +FQC +P
Sbjct: 428 ADLISDKSVLASVHHPALIVFQCCNP 453


>sp|P03264|DNB2_ADE02 Early E2A DNA-binding protein OS=Human
           adenovirus C serotype 2 GN=DBP PE=1 SV=1
          Length = 529

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 119 ADLSSCHKVLASLWHPSSGLFQCPSP 196
           ADL S   VLAS+ HP+  +FQC +P
Sbjct: 428 ADLISDKSVLASVHHPALIVFQCCNP 453
tr_hit_id Q01M69
Definition tr|Q01M69|Q01M69_ORYSA OSIGBa0114M03.4 protein OS=Oryza sativa
Align length 70
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917154|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_H07.
         (415 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01M69|Q01M69_ORYSA OSIGBa0114M03.4 protein OS=Oryza sativa G...    35   1.9  
tr|B1P2V2|B1P2V2_HEMMA NADH-ubiquinone oxidoreductase chain 2 (F...    33   7.1  
tr|Q94HV4|Q94HV4_ORYSA Putative retroelement OS=Oryza sativa GN=...    33   7.1  
tr|Q94GQ0|Q94GQ0_ORYSJ Putative reverse transcriptase (Retrotran...    33   7.1  
tr|Q7XFZ5|Q7XFZ5_ORYSJ Os10g0317000 protein OS=Oryza sativa subs...    33   7.1  
tr|A5B3Y5|A5B3Y5_VITVI Putative uncharacterized protein OS=Vitis...    33   9.2  
tr|Q2UBY5|Q2UBY5_ASPOR Predicted protein OS=Aspergillus oryzae G...    33   9.2  
tr|B8N527|B8N527_ASPFL YjgH family protein OS=Aspergillus flavus...    33   9.2  

>tr|Q01M69|Q01M69_ORYSA OSIGBa0114M03.4 protein OS=Oryza sativa
           GN=OSIGBa0114M03.4 PE=4 SV=1
          Length = 1448

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -2

Query: 411 MSEKMMHHLGL*VSRPAPC*AKMANTVKVLCVGVINAVRIKAFNTEVEVDIFVKPHKGEG 232
           +SE      GL + +     A +AN  +V C+GVI    +         D+FV P    G
Sbjct: 363 ISEAAAQRSGLPLQQRPRLTAMVANGERVTCIGVIRGAPLTIGGNSFPADLFVMPL--AG 420

Query: 231 YTKILGRPWL 202
           Y  +LG  WL
Sbjct: 421 YDVVLGTRWL 430


>tr|B1P2V2|B1P2V2_HEMMA NADH-ubiquinone oxidoreductase chain 2
           (Fragment) OS=Hemidactylus mabouia GN=ND2 PE=3 SV=1
          Length = 323

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 263 STSTSVLNAFILTAFITPTHRTFTVFAILAQHGAGLLT-YKPKWCIIFSL 409
           +TST  +N    T  ++PT  T T+  +L+  G   LT + PKW II+ L
Sbjct: 198 NTSTKTINDLNTTWTMSPTLLTTTMITLLSLAGLPPLTGFMPKWLIIYEL 247


>tr|Q94HV4|Q94HV4_ORYSA Putative retroelement OS=Oryza sativa
           GN=OSJNBb0036B06.3 PE=4 SV=1
          Length = 1476

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 351 AKMANTVKVLCVGVINAVRIKAFNTEVEVDIFVKPHKGEGYTKILGRPWL 202
           A +AN  KV C GV+    I       +VD++V P    GY  +LG  W+
Sbjct: 383 ATVANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPL--AGYDMVLGTQWM 430


>tr|Q94GQ0|Q94GQ0_ORYSJ Putative reverse transcriptase
           (Retrotransposon protein, putative, unclassified)
           OS=Oryza sativa subsp. japonica GN=OJ1124_H03.13 PE=4
           SV=1
          Length = 258

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = -2

Query: 351 AKMANTVKVLCVGVINAVRIKAFNTEVEVDIFVKPHKGEGYTKILGRPWLMVGLG 187
           A +AN  KV C GVI    +    +   VD+FV P    GY  +LG  W M  LG
Sbjct: 79  ATVANGEKVACPGVIRQAVLSIDGSLFTVDLFVIPL--AGYDMVLGTQW-MASLG 130


>tr|Q7XFZ5|Q7XFZ5_ORYSJ Os10g0317000 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0317000 PE=4 SV=1
          Length = 1476

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 351 AKMANTVKVLCVGVINAVRIKAFNTEVEVDIFVKPHKGEGYTKILGRPWL 202
           A +AN  KV C GV+    I       +VD++V P    GY  +LG  W+
Sbjct: 383 ATVANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPL--AGYDMVLGTQWM 430


>tr|A5B3Y5|A5B3Y5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016044 PE=4 SV=1
          Length = 196

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = +2

Query: 8   PSPQCYCRLSSLTP--------PLKWLKSHY*KTHPQRFQDSCPVADLSSCHKVLASLWH 163
           P PQ   RLS + P        PL  L +   +     F  SCP++  SS H+    L+ 
Sbjct: 119 PDPQVIQRLSGIVPGSPTSCLDPLVILAALRHRARIPYFSVSCPISFYSSRHRARFPLFS 178

Query: 164 PSSGLFQCPSPTI 202
           P+S    CP P +
Sbjct: 179 PAS----CPDPLV 187


>tr|Q2UBY5|Q2UBY5_ASPOR Predicted protein OS=Aspergillus oryzae
           GN=AO090012000815 PE=4 SV=1
          Length = 146

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = -2

Query: 321 CVGVINAVRIKAFNTEVEVDIFVKPHK-----GEGYTKILGR 211
           C+  + A+  K     V V +FV  HK     GEGYT++LGR
Sbjct: 80  CIRAVQALGGKGAENVVRVRMFVSRHKDCVAVGEGYTEVLGR 121


>tr|B8N527|B8N527_ASPFL YjgH family protein OS=Aspergillus flavus
           NRRL3357 GN=AFLA_020650 PE=4 SV=1
          Length = 156

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = -2

Query: 321 CVGVINAVRIKAFNTEVEVDIFVKPHK-----GEGYTKILGR 211
           C+  + A+  K     V V +FV  HK     GEGYT++LGR
Sbjct: 80  CIRAVQALGGKGAENVVRVRMFVSRHKDCVAVGEGYTEVLGR 121