BP917156
Clone id YMU001_000096_H11
Library
Length 250
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGAATCTAACATACTCCAGTCCACCACGGACTATCGAAGTAACAAGATTGAGGAAATAC
TACATAATCCAAGAGGAGAGATACCTGTGAGCAATTCTGGATACAGGGGATTTTGGATGT
CATAAGCAGCTCTGAGAAGGATAGCAGGAAAAGCAAGTGTAAGTAAATGCTAATTGCTCA
TACATGCACATTAATTTATGTGTAGGCAACTCTGTCCGCTCGTCATCCTTCCCTGTCTAT
CAGGCCAACC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917156|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_H11.
(250 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B0C464
Definition tr|B0C464|B0C464_ACAM1 Pyridoxamine 5'-phosphate oxidase family protein, putative OS=Acaryochloris marina (strain MBIC 11017)
Align length 27
Score (bit) 30.4
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917156|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_H11.
(250 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0C464|B0C464_ACAM1 Pyridoxamine 5'-phosphate oxidase family ... 30 1.2
tr|A9SWS8|A9SWS8_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.2
tr|A7QWG3|A7QWG3_VITVI Chromosome undetermined scaffold_203, who... 28 4.4

>tr|B0C464|B0C464_ACAM1 Pyridoxamine 5'-phosphate oxidase family
protein, putative OS=Acaryochloris marina (strain MBIC
11017) GN=AM1_2448 PE=4 SV=1
Length = 193

Score = 30.4 bits (67), Expect(2) = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3

Query: 3 ESNILQSTTDYRSNKIEEILHNPRGEI 83
+SN L+ TD RS KIE+I NP G +
Sbjct: 50 DSNTLKFVTDRRSKKIEQIAKNPWGAL 76



Score = 24.6 bits (52), Expect(2) = 1.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2

Query: 83 TCEQFWIQGILDVISSSEKDS 145
T EQF I G L V+S++E+DS
Sbjct: 83 TREQFRISGELMVVSATEEDS 103


>tr|A9SWS8|A9SWS8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234337 PE=4 SV=1
Length = 196

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3

Query: 6 SNILQSTTDYRSNKIEEILHNPRGEI 83
S+ LQ TTD R++KIE+I H+P GEI
Sbjct: 51 SDKLQFTTDSRTHKIEDIKHSPFGEI 76


>tr|A7QWG3|A7QWG3_VITVI Chromosome undetermined scaffold_203, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00008642001 PE=4 SV=1
Length = 197

Score = 27.7 bits (60), Expect(2) = 4.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3

Query: 3 ESNILQSTTDYRSNKIEEILHNPRGEI 83
+S+ +Q TD R+ KIEE+ H P EI
Sbjct: 51 DSDKIQINTDGRTRKIEELKHCPFSEI 77



Score = 25.4 bits (54), Expect(2) = 4.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2

Query: 80 DTCEQFWIQGILDVISSSEKDSRK 151
D+ EQF I G +DVI S+ D K
Sbjct: 83 DSWEQFRINGRVDVIDGSDPDPMK 106