BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917158|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_A07.
         (245 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1XDD9|SYH_PORYE Histidyl-tRNA synthetase, chloroplastic OS=P...    32   1.3  
sp|P41183|BCL6_MOUSE B-cell lymphoma 6 protein homolog OS=Mus mu...    30   2.9  
sp|P51348|SYH_PORPU Histidyl-tRNA synthetase, chloroplastic OS=P...    30   3.7  
sp|Q7PRJ0|CTLH2_ANOGA CTL-like protein 2 OS=Anopheles gambiae GN...    30   3.7  
sp|Q2YB78|RBL_NITMU Ribulose bisphosphate carboxylase large chai...    30   4.9  
sp|Q5F9J5|PURA_NEIG1 Adenylosuccinate synthetase OS=Neisseria go...    29   8.3  
sp|A7HLH4|FMT_FERNB Methionyl-tRNA formyltransferase OS=Fervidob...    29   8.3  

>sp|Q1XDD9|SYH_PORYE Histidyl-tRNA synthetase, chloroplastic
           OS=Porphyra yezoensis GN=hisS PE=3 SV=1
          Length = 430

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 210 DTLCGGGKYIFLKHSPGGIAEDGLDLSFGAPLSLL 106
           DT+CGGG+Y  L H  GG A   +  + G    LL
Sbjct: 279 DTICGGGRYDSLVHQLGGKATPAVGCAIGLERLLL 313


>sp|P41183|BCL6_MOUSE B-cell lymphoma 6 protein homolog OS=Mus
           musculus GN=Bcl6 PE=1 SV=1
          Length = 707

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 83  KRAHKCIKRRESGAPKERSRPSSAIPPGLCFKKIYFP 193
           +RA  C   R+   P E SRP+  + P LC   IY P
Sbjct: 228 ERALPCDSARQ--VPNEYSRPAMEVSPSLCHSNIYSP 262


>sp|P51348|SYH_PORPU Histidyl-tRNA synthetase, chloroplastic
           OS=Porphyra purpurea GN=hisS PE=3 SV=1
          Length = 430

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 210 DTLCGGGKYIFLKHSPGGIAEDGLDLSFGAPLSLL 106
           DTLCGGG+Y  L H  GG     +  + G    LL
Sbjct: 279 DTLCGGGRYDSLIHQLGGNKTPAVGCAIGLERLLL 313


>sp|Q7PRJ0|CTLH2_ANOGA CTL-like protein 2 OS=Anopheles gambiae
           GN=AGAP010343 PE=3 SV=4
          Length = 790

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 133 FFWCTTFPSFYAFVGPLLQYSSFRWLWKILKVRLP 29
           FFWC  F S  AF   +L ++   W W   K RLP
Sbjct: 548 FFWCICFVS--AFSEMVLAFTFATWYWTRQKSRLP 580


>sp|Q2YB78|RBL_NITMU Ribulose bisphosphate carboxylase large chain
           OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
           11849) GN=cbbL PE=3 SV=1
          Length = 489

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 64  EKKNTVEEGPQMHKKKGKWCTKRKI 138
           E ++ V+EGPQ+ ++  KWCT  K+
Sbjct: 437 EGRDYVKEGPQILEEAAKWCTPLKL 461


>sp|Q5F9J5|PURA_NEIG1 Adenylosuccinate synthetase OS=Neisseria
           gonorrhoeae (strain ATCC 700825 / FA 1090) GN=purA PE=3
           SV=1
          Length = 434

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 213 GDTLCGGGKYIFLKHSPGGIAEDGLDLSFGA 121
           G TL  GGK   L+  P GI  +GLD   G+
Sbjct: 43  GHTLVVGGKKTILRLIPSGILHEGLDCFIGS 73


>sp|A7HLH4|FMT_FERNB Methionyl-tRNA formyltransferase
           OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
           5306 / Rt17-B1) GN=fmt PE=3 SV=1
          Length = 310

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 111 GKVVHQKKDQGHPLLYHQDYVLKKYTFLLHIKYLQFKGQ 227
           G VV  +K  G       D V+K    LLHIKY+QF G+
Sbjct: 255 GTVVRIEKQSG-------DGVIKTIDGLLHIKYIQFPGK 286

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917158|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_A07.
         (245 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******